BLASTX nr result

ID: Panax25_contig00050433 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00050433
         (940 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010246647.1 PREDICTED: aspartate, glycine, lysine and serine-...    74   3e-11
XP_020102903.1 RGG repeats nuclear RNA binding protein A-like is...    60   2e-06
XP_020102893.1 RGG repeats nuclear RNA binding protein A-like is...    60   2e-06
OAY84439.1 hypothetical protein ACMD2_03893 [Ananas comosus]           60   2e-06

>XP_010246647.1 PREDICTED: aspartate, glycine, lysine and serine-rich protein-like
           [Nelumbo nucifera]
          Length = 442

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 71/255 (27%), Positives = 102/255 (40%), Gaps = 39/255 (15%)
 Frame = -3

Query: 788 RNNGINDADQFGNRRLNGYPPENGRADGDEGWVEVFRNK------EGRPFQDDVQ-FTSR 630
           R  G N+   FGN    G     G+  GD GW E   ++      E RPF++D + F + 
Sbjct: 140 RGRGFNEDRGFGNEGQAGANETQGQTGGD-GWEEGTESQGKTYGNENRPFRNDNRAFRNE 198

Query: 629 NRNYRGERPGYDYVNNRVPRSQRGTH-------------------------------DAD 543
           NRN  GER  Y    NR  R   G +                               + D
Sbjct: 199 NRNGNGERRAYG-AGNRGFRGGEGRYGDRDGARYGRGEAPNGSEKVELGDGKEQPGNNTD 257

Query: 542 NNNSETKGNGSATTKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXKWQREEDAKKMTLKQY 363
           NNN   + +   TT++                              + EE+ K+MTL++Y
Sbjct: 258 NNNGGDEWDVPVTTELPKDAESEQEKVEQGTNQDASDK--------KPEEEDKEMTLEEY 309

Query: 362 AEMI-EKNKALGVSKSHERKVTLDKDFESMHVVTKNKEGDIFXXXXXXXXXXXXXXXXXX 186
            +++ EK K+L   KS ERKVTLDKDFE M ++ K KE  ++                  
Sbjct: 310 EKVLYEKRKSLEAFKSEERKVTLDKDFELMQLIEKKKEDTLYVKLKAEKDKLKKKDSLDK 369

Query: 185 XXKMRKMISIDEWQK 141
             K+RK +SI+E+ K
Sbjct: 370 EEKVRKSLSINEFLK 384


>XP_020102903.1 RGG repeats nuclear RNA binding protein A-like isoform X2 [Ananas
           comosus]
          Length = 435

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -3

Query: 404 QREEDAKKMTLKQYAEMI-EKNKALGVSKSHERKVTLDKDFESMHVVTKNKEGDI 243
           + EE+AKKMTL +Y +++ EK KAL   KS ERKV +DK F+ M V+ K KE D+
Sbjct: 290 EEEEEAKKMTLAEYEKLVQEKRKALEAYKSEERKVVVDKQFDGMQVIEKKKEDDL 344


>XP_020102893.1 RGG repeats nuclear RNA binding protein A-like isoform X1 [Ananas
           comosus]
          Length = 448

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -3

Query: 404 QREEDAKKMTLKQYAEMI-EKNKALGVSKSHERKVTLDKDFESMHVVTKNKEGDI 243
           + EE+AKKMTL +Y +++ EK KAL   KS ERKV +DK F+ M V+ K KE D+
Sbjct: 303 EEEEEAKKMTLAEYEKLVQEKRKALEAYKSEERKVVVDKQFDGMQVIEKKKEDDL 357


>OAY84439.1 hypothetical protein ACMD2_03893 [Ananas comosus]
          Length = 448

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -3

Query: 404 QREEDAKKMTLKQYAEMI-EKNKALGVSKSHERKVTLDKDFESMHVVTKNKEGDI 243
           + EE+AKKMTL +Y +++ EK KAL   KS ERKV +DK F+ M V+ K KE D+
Sbjct: 303 EEEEEAKKMTLAEYEKLVQEKRKALEAYKSEERKVVVDKQFDGMQVIEKKKEDDL 357


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