BLASTX nr result
ID: Panax25_contig00050297
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00050297
(382 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAA73042.1 polyprotein, partial [Ananas comosus] 107 1e-24
XP_017221294.1 PREDICTED: uncharacterized protein LOC108198025 [... 105 9e-24
AAX94881.1 retrotransposon protein, putative, Ty3-gypsy sub-clas... 89 6e-20
XP_015619275.1 PREDICTED: uncharacterized protein LOC107279679 [... 89 1e-19
ABA97872.1 retrotransposon protein, putative, Ty3-gypsy subclass... 93 2e-19
ADU56212.1 gag-pol polyprotein [Solanum lycopersicum] 92 2e-19
CAD40067.3 OSJNBa0085C10.19 [Oryza sativa Japonica Group] 92 3e-19
ABB47020.1 retrotransposon protein, putative, Ty3-gypsy subclass... 92 5e-19
AAV31278.1 putative polyprotein [Oryza sativa Japonica Group] 92 5e-19
AAP44586.1 putative polyprotein [Oryza sativa Japonica Group] AB... 91 7e-19
CAE04771.3 OSJNBa0079C19.12 [Oryza sativa Japonica Group] 91 7e-19
ABF95982.1 retrotransposon protein, putative, Ty3-gypsy subclass... 91 7e-19
AAV31373.1 putative polyprotein [Oryza sativa Japonica Group] 91 7e-19
AAV32231.1 putative polyprotein [Oryza sativa Japonica Group] 91 7e-19
AAX95995.1 retrotransposon protein, putative, Ty3-gypsy sub-clas... 91 8e-19
AAS07330.1 putative polyprotein [Oryza sativa Japonica Group] AB... 91 9e-19
CAH66095.1 OSIGBa0114I04.2 [Oryza sativa Indica Group] 91 9e-19
ABM55240.1 retrotransposon protein [Beta vulgaris] 91 9e-19
ABA99486.2 retrotransposon protein, putative, Ty3-gypsy subclass... 91 9e-19
XP_020081266.1 uncharacterized protein LOC109704893, partial [An... 87 1e-18
>CAA73042.1 polyprotein, partial [Ananas comosus]
Length = 871
Score = 107 bits (267), Expect = 1e-24
Identities = 56/121 (46%), Positives = 76/121 (62%)
Frame = +1
Query: 10 MLITTQEELISAMTKLELEIKFPKESDERLFQIDASPTLVDKVKSAQLQDKECETIKEKV 189
M + TQ LI M +LELEI P ++ RL + PTL+D++K Q D E + IK K+
Sbjct: 435 MHVVTQPRLIEQMKRLELEIVTP-DTPMRLMTLVVQPTLLDRIKEKQASDVELQKIKGKM 493
Query: 190 VEGSDVKYKIDTEGLLRFEERIWVPAVPELKEEILTEAHNTRYLIHPGSTKMYQDLR*HF 369
V+G + +D +GL+RF RI VPA +KE+IL EAH Y IHPG TKMY+DL+ +
Sbjct: 494 VDGCTGDFTLDGDGLMRFRGRICVPADSGIKEDILQEAHRAPYAIHPGGTKMYKDLKLLY 553
Query: 370 W 372
W
Sbjct: 554 W 554
>XP_017221294.1 PREDICTED: uncharacterized protein LOC108198025 [Daucus carota subsp.
sativus]
Length = 1084
Score = 105 bits (261), Expect = 9e-24
Identities = 57/124 (45%), Positives = 80/124 (64%)
Frame = +1
Query: 1 EKLMLITTQEELISAMTKLELEIKFPKESDERLFQIDASPTLVDKVKSAQLQDKECETIK 180
E+L L+T EL + KLELEIK ER++ + P L++K+K + Q+K E +
Sbjct: 959 ERLNLLTKPVELRKDIEKLELEIKDLSLEGERVYVMLVQPELLEKIK--RCQEKVMEE-Q 1015
Query: 181 EKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKEEILTEAHNTRYLIHPGSTKMYQDLR 360
+ G + D +G+ RF+ RIW+P V ELK EIL+EAH++RY IHPGSTKMYQDL+
Sbjct: 1016 RNGLSGEEYLCPKDEKGIKRFDNRIWIPKVDELKGEILSEAHDSRYSIHPGSTKMYQDLK 1075
Query: 361 *HFW 372
H+W
Sbjct: 1076 KHYW 1079
>AAX94881.1 retrotransposon protein, putative, Ty3-gypsy sub-class, partial
[Oryza sativa Japonica Group]
Length = 171
Score = 89.4 bits (220), Expect = 6e-20
Identities = 42/89 (47%), Positives = 60/89 (67%)
Frame = +1
Query: 106 IDASPTLVDKVKSAQLQDKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKE 285
++A PTL+D+V+ AQ+ D + + IK+ + G + + D +G + ERI VP +LK+
Sbjct: 40 LEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKD 99
Query: 286 EILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
IL EAH+T Y IHPGSTKMYQDL+ FW
Sbjct: 100 AILKEAHDTLYSIHPGSTKMYQDLKERFW 128
>XP_015619275.1 PREDICTED: uncharacterized protein LOC107279679 [Oryza sativa
Japonica Group]
Length = 190
Score = 89.0 bits (219), Expect = 1e-19
Identities = 43/89 (48%), Positives = 59/89 (66%)
Frame = +1
Query: 106 IDASPTLVDKVKSAQLQDKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKE 285
++A PTL+D+V+ AQ+ D + + IK+ + G + Y D +G + ERI VP ELK+
Sbjct: 88 LEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGYLEDEQGTVWLGERICVPENKELKD 147
Query: 286 EILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
IL EAH+T Y IHPGSTKMYQDL+ W
Sbjct: 148 AILKEAHDTLYSIHPGSTKMYQDLKEKCW 176
>ABA97872.1 retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 923
Score = 92.8 bits (229), Expect = 2e-19
Identities = 44/89 (49%), Positives = 60/89 (67%)
Frame = +1
Query: 106 IDASPTLVDKVKSAQLQDKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKE 285
++A PTL+D+V+ AQ+ D + + IK+ + G + Y D +G + ERI VP ELK+
Sbjct: 628 LEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGYLEDEQGTIWLGERICVPESKELKD 687
Query: 286 EILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
IL EAH+T Y IHPGSTKMYQDL+ FW
Sbjct: 688 AILKEAHDTLYSIHPGSTKMYQDLKEKFW 716
>ADU56212.1 gag-pol polyprotein [Solanum lycopersicum]
Length = 624
Score = 92.4 bits (228), Expect = 2e-19
Identities = 49/116 (42%), Positives = 73/116 (62%)
Frame = +1
Query: 25 QEELISAMTKLELEIKFPKESDERLFQIDASPTLVDKVKSAQLQDKECETIKEKVVEGSD 204
+E I A + LE+ E L ++A + +DK+K Q D++ I++KV+ G
Sbjct: 471 REVQILANDLMRLEVN---EKGGFLACVEARSSSLDKIKGKQFNDEKLIRIRDKVLRGEA 527
Query: 205 VKYKIDTEGLLRFEERIWVPAVPELKEEILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
+ +ID EG+LR + R+ VP V +L ILTEAH++RY IHPG+TKMY+DL+ HFW
Sbjct: 528 KEAQIDEEGVLRIKGRVCVPRVDDLINTILTEAHSSRYSIHPGATKMYRDLKQHFW 583
>CAD40067.3 OSJNBa0085C10.19 [Oryza sativa Japonica Group]
Length = 741
Score = 92.0 bits (227), Expect = 3e-19
Identities = 45/89 (50%), Positives = 60/89 (67%)
Frame = +1
Query: 106 IDASPTLVDKVKSAQLQDKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKE 285
++A PTLVD+V++AQ+ D E +K+ + G + D G + ER+WVP ELK+
Sbjct: 250 LEAWPTLVDQVRAAQVNDPEIAELKKNMRLGKARDFLEDEHGTIWMGERLWVPDDKELKD 309
Query: 286 EILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
ILTEAH T+Y IHPGSTKMYQDL+ FW
Sbjct: 310 LILTEAHQTKYSIHPGSTKMYQDLKEKFW 338
>ABB47020.1 retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 989
Score = 91.7 bits (226), Expect = 5e-19
Identities = 43/89 (48%), Positives = 60/89 (67%)
Frame = +1
Query: 106 IDASPTLVDKVKSAQLQDKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKE 285
++A PTL+D+V+ AQ+ D + + IK+ + G + + D +G +R ERI VP LK+
Sbjct: 712 LEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVRLGERICVPDNKNLKD 771
Query: 286 EILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
IL EAH+T Y IHPGSTKMYQDL+ FW
Sbjct: 772 AILKEAHDTLYSIHPGSTKMYQDLKERFW 800
>AAV31278.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1727
Score = 91.7 bits (226), Expect = 5e-19
Identities = 43/89 (48%), Positives = 60/89 (67%)
Frame = +1
Query: 106 IDASPTLVDKVKSAQLQDKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKE 285
++A PTL+D+V+ AQ+ D + + IK+ + G + + D G +R ERI VP +LK+
Sbjct: 1161 LEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEHGTVRLGERICVPDNKDLKD 1220
Query: 286 EILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
IL EAH+T Y IHPGSTKMYQDL+ FW
Sbjct: 1221 AILKEAHDTLYSIHPGSTKMYQDLKERFW 1249
>AAP44586.1 putative polyprotein [Oryza sativa Japonica Group] ABF97037.1
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1436
Score = 91.3 bits (225), Expect = 7e-19
Identities = 43/89 (48%), Positives = 60/89 (67%)
Frame = +1
Query: 106 IDASPTLVDKVKSAQLQDKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKE 285
++A PTL+D+V+ AQ+ D + + IK+ + G + + D +G + ERI VP +LK+
Sbjct: 945 LEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKD 1004
Query: 286 EILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
IL EAHNT Y IHPGSTKMYQDL+ FW
Sbjct: 1005 AILKEAHNTLYSIHPGSTKMYQDLKERFW 1033
>CAE04771.3 OSJNBa0079C19.12 [Oryza sativa Japonica Group]
Length = 1484
Score = 91.3 bits (225), Expect = 7e-19
Identities = 50/120 (41%), Positives = 72/120 (60%)
Frame = +1
Query: 13 LITTQEELISAMTKLELEIKFPKESDERLFQIDASPTLVDKVKSAQLQDKECETIKEKVV 192
L T+ EL + +L L I S + ++A PTL+D+V+ AQ+ D + + IK+ +
Sbjct: 1012 LFGTRTELCKELERLNLGIV----SRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMR 1067
Query: 193 EGSDVKYKIDTEGLLRFEERIWVPAVPELKEEILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
G + + D +G + ERI VP +LK+ IL EAH+T Y IHPGSTKMYQDL+ FW
Sbjct: 1068 RGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFW 1127
>ABF95982.1 retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1724
Score = 91.3 bits (225), Expect = 7e-19
Identities = 45/89 (50%), Positives = 60/89 (67%)
Frame = +1
Query: 106 IDASPTLVDKVKSAQLQDKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKE 285
++A PTLVD+V++AQ+ D E +K+ + G + D G +R ER+ VP ELK+
Sbjct: 1273 LEARPTLVDQVRAAQVNDSEIVELKKNMRVGKARDFHEDEHGTIRMGERLCVPDDKELKD 1332
Query: 286 EILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
ILTEAH T+Y IHPGSTKMYQDL+ FW
Sbjct: 1333 LILTEAHQTQYSIHPGSTKMYQDLKEKFW 1361
>AAV31373.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 2408
Score = 91.3 bits (225), Expect = 7e-19
Identities = 51/115 (44%), Positives = 67/115 (58%)
Frame = +1
Query: 28 EELISAMTKLELEIKFPKESDERLFQIDASPTLVDKVKSAQLQDKECETIKEKVVEGSDV 207
EEL KL L I S + ++A PTL D+V+ AQ+ D + + IK+ + G +
Sbjct: 903 EELCQEFEKLNLGIV----SKGFVAALEAKPTLFDQVREAQVNDPDIQEIKKNMRRGKAI 958
Query: 208 KYKIDTEGLLRFEERIWVPAVPELKEEILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
Y D +G + ERI VP ELK+ I+ EAH T Y IHPGSTKMYQDL+ FW
Sbjct: 959 GYVEDEQGTVWLGERICVPENKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFW 1013
>AAV32231.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 3092
Score = 91.3 bits (225), Expect = 7e-19
Identities = 44/89 (49%), Positives = 59/89 (66%)
Frame = +1
Query: 106 IDASPTLVDKVKSAQLQDKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKE 285
++A PTL+D+V+ AQ+ D + IK+ + G + Y D +G + ERI VP ELK+
Sbjct: 979 LEAKPTLIDQVREAQINDPNIQEIKKNMRRGKAIGYLEDEQGTVWLGERICVPENKELKD 1038
Query: 286 EILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
IL EAH+T Y IHPGSTKMYQDL+ FW
Sbjct: 1039 AILKEAHDTLYSIHPGSTKMYQDLKEKFW 1067
>AAX95995.1 retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] ABA93078.1 retrotransposon
protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 552
Score = 90.9 bits (224), Expect = 8e-19
Identities = 51/132 (38%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Frame = +1
Query: 4 KLMLITTQEELISAMTKLELEIKFPKESDER---------LFQIDASPTLVDKVKSAQLQ 156
K L++ QEEL+ + ++ +K +E + + + A PTLVD+V++ Q+
Sbjct: 396 KRKLVSAQEELLQRLGFEDMSVKLQQELEHLNLGIVEHRYVAALKARPTLVDQVRAPQVN 455
Query: 157 DKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKEEILTEAHNTRYLIHPGS 336
D E +K+ + G + D G + ER VP ELK+ ILTEAH T+Y IHPGS
Sbjct: 456 DPEIAELKKNMRFGKARDFHEDEHGTIWLGERFCVPEDKELKDLILTEAHQTQYSIHPGS 515
Query: 337 TKMYQDLR*HFW 372
TKMYQDL+ FW
Sbjct: 516 TKMYQDLKEKFW 527
>AAS07330.1 putative polyprotein [Oryza sativa Japonica Group] ABF98050.1
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1294
Score = 90.9 bits (224), Expect = 9e-19
Identities = 44/89 (49%), Positives = 59/89 (66%)
Frame = +1
Query: 106 IDASPTLVDKVKSAQLQDKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKE 285
++A PTL+D+V+ AQ D + + IK+ + G + Y D +G + ERI VP ELK+
Sbjct: 912 LEAKPTLIDQVREAQTNDPDIQEIKKNMRRGKAIGYLEDEQGTVWLGERICVPENKELKD 971
Query: 286 EILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
IL EAH+T Y IHPGSTKMYQDL+ FW
Sbjct: 972 AILKEAHDTLYSIHPGSTKMYQDLKEKFW 1000
>CAH66095.1 OSIGBa0114I04.2 [Oryza sativa Indica Group]
Length = 1361
Score = 90.9 bits (224), Expect = 9e-19
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = +1
Query: 106 IDASPTLVDKVKSAQLQDKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKE 285
++A PTL+D+V+ AQ+ D + + IK+ + G + + D +G + +ERI VP +LK+
Sbjct: 932 LEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLDERICVPDNKDLKD 991
Query: 286 EILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
IL EAH+T Y IHPGSTKMYQDL+ FW
Sbjct: 992 AILKEAHDTLYSIHPGSTKMYQDLKGRFW 1020
>ABM55240.1 retrotransposon protein [Beta vulgaris]
Length = 1501
Score = 90.9 bits (224), Expect = 9e-19
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +1
Query: 7 LMLITTQEELISAMTKLELEIKFPKESDERLFQIDASPTLVDKVKSAQLQDKECETIKEK 186
L + EEL M +L LEI P ES+ RL + ++ D++ Q+ D+ + IKEK
Sbjct: 976 LSTLIVPEELCRDMKRLNLEILNPGESEARLSNLSLGVSIFDEIIEGQVGDEHLDKIKEK 1035
Query: 187 VVEGSDVKYKIDTEGLLRFEERIWVP-AVPELKEEILTEAHNTRYLIHPGSTKMYQDLR* 363
+ +G ++ +KI +G LRF+ R VP +LK ++ E HNT Y +HPG K+Y+DL+
Sbjct: 1036 MKQGKEIDFKIHEDGSLRFKGRWCVPQKCNDLKRRLMDEGHNTPYSVHPGGDKLYKDLKV 1095
Query: 364 HFW 372
+W
Sbjct: 1096 IYW 1098
>ABA99486.2 retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1595
Score = 90.9 bits (224), Expect = 9e-19
Identities = 43/89 (48%), Positives = 60/89 (67%)
Frame = +1
Query: 106 IDASPTLVDKVKSAQLQDKECETIKEKVVEGSDVKYKIDTEGLLRFEERIWVPAVPELKE 285
++A PTL+D+V+ AQ+ D + + IK+ + G + Y D +G + ERI VP +LK+
Sbjct: 1155 LEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGYLEDEQGTVWLGERICVPDNKDLKD 1214
Query: 286 EILTEAHNTRYLIHPGSTKMYQDLR*HFW 372
IL EAH+T Y IHPGSTKMYQDL+ FW
Sbjct: 1215 AILKEAHDTLYSIHPGSTKMYQDLKERFW 1243
>XP_020081266.1 uncharacterized protein LOC109704893, partial [Ananas comosus]
Length = 212
Score = 87.0 bits (214), Expect = 1e-18
Identities = 44/121 (36%), Positives = 68/121 (56%)
Frame = +1
Query: 10 MLITTQEELISAMTKLELEIKFPKESDERLFQIDASPTLVDKVKSAQLQDKECETIKEKV 189
+LIT Q L M +++LE+ E L + PTL++K+KS Q D + ++ +
Sbjct: 77 LLITNQVPLWKEMGRMDLEV-VASEVPSMLTALVVQPTLLEKIKSLQSADSNLQKVRRDI 135
Query: 190 VEGSDVKYKIDTEGLLRFEERIWVPAVPELKEEILTEAHNTRYLIHPGSTKMYQDLR*HF 369
G + I +G LR+ R VP E+++ +L EAH +RY +HPG TKMY+DLR +
Sbjct: 136 EGGRSGDFSIHADGALRYRNRWCVPEKEEVRKLVLREAHQSRYSVHPGGTKMYEDLRVLY 195
Query: 370 W 372
W
Sbjct: 196 W 196