BLASTX nr result

ID: Panax25_contig00050253 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00050253
         (499 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAU12072.1 40S ribosomal protein S25, partial [Noccaea caerulesc...    95   1e-21
JAU98373.1 40S ribosomal protein S25-3, partial [Noccaea caerule...    92   6e-21
JAU24935.1 40S ribosomal protein S25, partial [Noccaea caerulesc...    92   1e-20
AFK38515.1 unknown [Lotus japonicus]                                   61   6e-09
JAU98891.1 hypothetical protein MP_TR10464_c0_g1_i1_g.31996, par...    55   5e-07
EWM24294.1 ribosomal protein s25 [Nannochloropsis gaditana]            54   2e-06
XP_012893805.1 uncharacterized protein [Blastocystis hominis] CB...    54   2e-06
OAO11943.1 ribosomal protein S25 [Blastocystis sp. ATCC 50177/Na...    52   4e-06
XP_013333232.1 R1 protein, putative [Eimeria maxima] CDJ56581.1 ...    53   8e-06

>JAU12072.1 40S ribosomal protein S25, partial [Noccaea caerulescens]
           JAU45650.1 40S ribosomal protein S25, partial [Noccaea
           caerulescens] JAU62520.1 40S ribosomal protein S25,
           partial [Noccaea caerulescens] JAU92744.1 40S ribosomal
           protein S25, partial [Noccaea caerulescens]
          Length = 154

 Score = 94.7 bits (234), Expect = 1e-21
 Identities = 46/67 (68%), Positives = 55/67 (82%)
 Frame = -1

Query: 370 SHKVVFNSELFNQFISQVPKKLKVITIYAIVDLFKINCSLARRGIKELLEKNLIIPVAPS 191
           +++VVF  EL+N+F+  VPKKLKVITIY +V+ FKINCSLARRGI+ELL K  I PV PS
Sbjct: 44  NNRVVFTKELYNKFLIDVPKKLKVITIYNLVENFKINCSLARRGIRELLSKGTIQPVVPS 103

Query: 190 GTMAVYT 170
           GT AVYT
Sbjct: 104 GTYAVYT 110


>JAU98373.1 40S ribosomal protein S25-3, partial [Noccaea caerulescens]
          Length = 114

 Score = 91.7 bits (226), Expect = 6e-21
 Identities = 44/67 (65%), Positives = 54/67 (80%)
 Frame = -1

Query: 370 SHKVVFNSELFNQFISQVPKKLKVITIYAIVDLFKINCSLARRGIKELLEKNLIIPVAPS 191
           +++VVF  +L+ +F+  VPKKLKVITIY +V+ FKINCSLARRGI+ELL K  I PV PS
Sbjct: 3   NNRVVFTKDLYQKFLVDVPKKLKVITIYNLVENFKINCSLARRGIRELLAKGTITPVVPS 62

Query: 190 GTMAVYT 170
           GT AVYT
Sbjct: 63  GTYAVYT 69


>JAU24935.1 40S ribosomal protein S25, partial [Noccaea caerulescens]
          Length = 147

 Score = 91.7 bits (226), Expect = 1e-20
 Identities = 44/67 (65%), Positives = 54/67 (80%)
 Frame = -1

Query: 370 SHKVVFNSELFNQFISQVPKKLKVITIYAIVDLFKINCSLARRGIKELLEKNLIIPVAPS 191
           +++VVF  +L+ +F+  VPKKLKVITIY +V+ FKINCSLARRGI+ELL K  I PV PS
Sbjct: 36  NNRVVFTKDLYQKFLVDVPKKLKVITIYNLVENFKINCSLARRGIRELLAKGTITPVVPS 95

Query: 190 GTMAVYT 170
           GT AVYT
Sbjct: 96  GTYAVYT 102


>AFK38515.1 unknown [Lotus japonicus]
          Length = 143

 Score = 61.2 bits (147), Expect = 6e-09
 Identities = 32/70 (45%), Positives = 49/70 (70%)
 Frame = -1

Query: 370 SHKVVFNSELFNQFISQVPKKLKVITIYAIVDLFKINCSLARRGIKELLEKNLIIPVAPS 191
           ++ VVF+ EL+++ + +VP   K+ITI +I+D  +IN SLARR ++EL  K+LI PVA S
Sbjct: 38  NNAVVFDKELYDKLLKEVPTS-KLITISSIIDKLRINGSLARRALRELAAKDLIRPVALS 96

Query: 190 GTMAVYTPNP 161
               +YT +P
Sbjct: 97  HAQFIYTRSP 106


>JAU98891.1 hypothetical protein MP_TR10464_c0_g1_i1_g.31996, partial [Noccaea
           caerulescens]
          Length = 107

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 40/94 (42%), Positives = 44/94 (46%)
 Frame = +2

Query: 203 RDDEVLLEQLLDAPARQRAVXXXXXXXXXXXXXXQLLRHLRDELVEQLAVEDHLVRLLLS 382
           R DEVL +QLLD  A QRAV               LLRHL +EL +QL VE H V LLL+
Sbjct: 5   RLDEVLRQQLLDRAAGQRAVDLVGLSQGVRGDDLHLLRHLLNELRQQLGVEHHAVVLLLT 64

Query: 383 QXXXXXXXXXXXXXXXRLRSQQLGCLRLLNFWRH 484
                            L  QQ G LR L F RH
Sbjct: 65  DLALAPLLLALALGGG-LGGQQFGLLRFLGFRRH 97


>EWM24294.1 ribosomal protein s25 [Nannochloropsis gaditana]
          Length = 111

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
 Frame = -1

Query: 370 SHKVVFNSELF-NQFISQVPKKLKVITIYAIVDLFKINCSLARRGIKELLEKNLIIPVAP 194
           ++KV+F+ E++ N+ ++++PK  K+IT  A+V+  KIN SLAR  ++EL EK LI PV+ 
Sbjct: 38  ANKVLFDEEMYTNRLLTEIPKS-KLITPSALVERLKINGSLARAALRELKEKGLIKPVSV 96

Query: 193 SGTMAVYT 170
             +  +YT
Sbjct: 97  HHSQIIYT 104


>XP_012893805.1 uncharacterized protein [Blastocystis hominis] CBK19757.2 unnamed
           protein product [Blastocystis hominis]
          Length = 104

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 27/60 (45%), Positives = 42/60 (70%)
 Frame = -1

Query: 367 HKVVFNSELFNQFISQVPKKLKVITIYAIVDLFKINCSLARRGIKELLEKNLIIPVAPSG 188
           +KV F    +++ +++VPK +K+IT+Y IVD  KIN S AR GI+ELL++  I+ V+  G
Sbjct: 38  NKVYFEQADYDKLVAEVPK-MKLITVYTIVDRLKINGSCARAGIRELLKQGKIVEVSKRG 96


>OAO11943.1 ribosomal protein S25 [Blastocystis sp. ATCC 50177/Nand II]
           OAO15839.1 40S ribosomal protein S25 [Blastocystis sp.
           ATCC 50177/Nand II]
          Length = 86

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 26/61 (42%), Positives = 43/61 (70%)
 Frame = -1

Query: 370 SHKVVFNSELFNQFISQVPKKLKVITIYAIVDLFKINCSLARRGIKELLEKNLIIPVAPS 191
           ++KV F    +++ +++VPK +K+IT+Y IVD  KIN S AR GI+EL+++  I+ V+  
Sbjct: 19  NNKVYFEKADYDKLLAEVPK-MKLITVYGIVDRLKINGSCARAGIRELVKQGKIVEVSKR 77

Query: 190 G 188
           G
Sbjct: 78  G 78


>XP_013333232.1 R1 protein, putative [Eimeria maxima] CDJ56581.1 R1 protein,
           putative [Eimeria maxima]
          Length = 150

 Score = 53.1 bits (126), Expect = 8e-06
 Identities = 26/60 (43%), Positives = 42/60 (70%)
 Frame = -1

Query: 370 SHKVVFNSELFNQFISQVPKKLKVITIYAIVDLFKINCSLARRGIKELLEKNLIIPVAPS 191
           ++ V+F+    ++F+++VPK +K++T Y I +  +IN SLARRGI+EL  K LI P+  S
Sbjct: 68  NYAVMFDQATLDKFMAEVPK-MKLVTPYTICERLRINASLARRGIRELYSKGLIRPLVES 126


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