BLASTX nr result

ID: Panax25_contig00048135 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00048135
         (431 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDQ74000.1 unnamed protein product [Oncorhynchus mykiss]               60   7e-08

>CDQ74000.1 unnamed protein product [Oncorhynchus mykiss]
          Length = 356

 Score = 60.1 bits (144), Expect = 7e-08
 Identities = 46/135 (34%), Positives = 56/135 (41%), Gaps = 6/135 (4%)
 Frame = +1

Query: 13  NYYHGRPRHP*HLQNLHPQAPQLAQSLRNQYQG------KKQRSCPEAPHSHQ*MHLQQH 174
           ++YH  P H    Q  HP  PQ AQ  + QYQ       ++Q   P APHS       Q 
Sbjct: 126 DHYHPHPPHHTQPQQPHP-GPQ-AQLPQPQYQHPPNPQQQQQPPYPHAPHSQHPQPPPQQ 183

Query: 175 TPDPLQPEKLFPELPSILPPLSNRQPP*ARPSHRPFEAHSQA*LSSHGPQLAPPP*AHPS 354
            P P QP++ +P  P   P    +QPP     H+P   H Q     H  Q    P  HP 
Sbjct: 184 HPHPQQPQQQYPPHPQQHPQGHPQQPPPQHQQHQPRPQHPQQAQHPHPQQQHAHPGQHP- 242

Query: 355 HGLPKAQPQA*LSSH 399
           HG P  Q    L  H
Sbjct: 243 HGPPPQQQHPHLQQH 257


Top