BLASTX nr result

ID: Panax25_contig00047987 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00047987
         (438 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011072704.1 PREDICTED: RING-H2 finger protein ATL3 [Sesamum i...    56   2e-06
XP_011079214.1 PREDICTED: RING-H2 finger protein ATL60-like [Ses...    55   3e-06

>XP_011072704.1 PREDICTED: RING-H2 finger protein ATL3 [Sesamum indicum]
          Length = 301

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
 Frame = -1

Query: 438 STSSNMSS-----DGHLVIDIPRQINEEEDDQKSPAPTXXXXXXXXXXXXXKINPSSPTN 274
           S+SS+M S     DG  VIDIPRQINEEE+ QKSP PT             ++NPSSP N
Sbjct: 232 SSSSSMGSTSGRPDGMSVIDIPRQINEEEE-QKSPVPTRLRSLKRLLSGNRRVNPSSPRN 290

Query: 273 VDVE 262
           +D+E
Sbjct: 291 LDLE 294


>XP_011079214.1 PREDICTED: RING-H2 finger protein ATL60-like [Sesamum indicum]
          Length = 297

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 8/67 (11%)
 Frame = -1

Query: 438 STSSNMSS--------DGHLVIDIPRQINEEEDDQKSPAPTXXXXXXXXXXXXXKINPSS 283
           S+SS+ SS        DG LVIDIPRQ+NEEE+ QKSP PT             ++NPSS
Sbjct: 225 SSSSSSSSTAPTGNRPDGMLVIDIPRQVNEEEE-QKSPLPTRFRTLKRLLSGNRRVNPSS 283

Query: 282 PTNVDVE 262
           P N+D+E
Sbjct: 284 PRNLDLE 290


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