BLASTX nr result
ID: Panax25_contig00046850
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00046850
(545 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_019105445.1 PREDICTED: uncharacterized protein LOC109135192 [... 92 6e-37
JAU62511.1 Retrovirus-related Pol polyprotein from transposon TN... 94 8e-37
XP_013669093.1 PREDICTED: uncharacterized mitochondrial protein ... 100 2e-36
XP_019105930.1 PREDICTED: uncharacterized protein LOC109135359 [... 91 4e-36
XP_018852596.1 PREDICTED: uncharacterized protein LOC109014546 [... 97 4e-36
XP_017179455.1 PREDICTED: uncharacterized mitochondrial protein ... 93 5e-36
XP_010684978.1 PREDICTED: uncharacterized protein LOC104899479 [... 92 2e-35
XP_019108082.1 PREDICTED: uncharacterized protein LOC109136435 [... 95 2e-35
JAU04955.1 Copia protein, partial [Noccaea caerulescens] 97 3e-35
XP_018831842.1 PREDICTED: uncharacterized protein LOC108999403 [... 97 3e-35
JAU20527.1 Retrovirus-related Pol polyprotein from transposon TN... 97 3e-35
BAB90546.1 putative rice retrotransposon retrofit gag/pol polypr... 89 5e-35
XP_019186544.1 PREDICTED: uncharacterized protein LOC109181247 [... 90 5e-35
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 91 7e-35
XP_019106791.1 PREDICTED: uncharacterized protein LOC104900682 [... 93 9e-35
AAX96193.1 retrotransposon protein, putative, Ty1-copia sub-clas... 94 9e-35
OMO81232.1 Reverse transcriptase, RNA-dependent DNA polymerase [... 88 9e-35
AAT93988.1 putative polyprotein [Oryza sativa Japonica Group] 94 9e-35
BAH93014.1 Os05g0235100, partial [Oryza sativa Japonica Group] 94 9e-35
ABA98286.2 retrotransposon protein, putative, Ty1-copia subclass... 94 1e-34
>XP_019105445.1 PREDICTED: uncharacterized protein LOC109135192 [Beta vulgaris
subsp. vulgaris]
Length = 436
Score = 91.7 bits (226), Expect(2) = 6e-37
Identities = 41/62 (66%), Positives = 48/62 (77%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V+M QPPGF+D T P HVCLL+KSLYGLKQAPR WY +T++ GF SSKCD SLF
Sbjct: 105 ETVYMFQPPGFQDSTHPKHVCLLQKSLYGLKQAPRVWYQRFATYILSIGFVSSKCDPSLF 164
Query: 181 IF 186
I+
Sbjct: 165 IY 166
Score = 90.1 bits (222), Expect(2) = 6e-37
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Frame = +3
Query: 180 HFQSA*YSLIYFSVC**YNYSAFAINNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVF 359
H Q Y L+Y S + +IS L EFA+ DLGPL++FLG+ V+R+ T +F
Sbjct: 168 HGQDMVYLLLYVDDIVLATSSDVLRSRIISLLRSEFAMTDLGPLSYFLGISVKRTPTHMF 227
Query: 360 ISQKHYIDDLVAKAGMHNVNPIATPLSPSTPLTKSDGPLFIDTTKYHQLVGALQYILL-- 533
+SQ Y ++++A+A M NP ATP+ L+ S GP D T Y +L GALQY+
Sbjct: 228 LSQTKYAEEILARANMFACNPCATPVDTKAKLSASFGPPIQDRTLYRELAGALQYLTFTR 287
Query: 534 PELS 545
P++S
Sbjct: 288 PDIS 291
>JAU62511.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 737
Score = 94.0 bits (232), Expect(2) = 8e-37
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V+M QPPGF DP +P+HVCLLKKSLYGLKQAPRAWY +TF TK GF SK D SLF
Sbjct: 344 ETVYMHQPPGFVDPARPNHVCLLKKSLYGLKQAPRAWYQRFATFATKIGFKQSKSDASLF 403
Query: 181 I 183
+
Sbjct: 404 V 404
Score = 87.4 bits (215), Expect(2) = 8e-37
Identities = 39/92 (42%), Positives = 61/92 (66%)
Frame = +3
Query: 252 INNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVNPIAT 431
+ ++I+SL+ EF++ DLG L++FLG+ + R G+F++Q++Y D++ +AGM N NP +T
Sbjct: 431 LRSIITSLNSEFSMTDLGELHYFLGIAIHRDKHGMFLNQQNYAADIIHRAGMTNCNPCST 490
Query: 432 PLSPSTPLTKSDGPLFIDTTKYHQLVGALQYI 527
P S+ L SDG D Y L GALQY+
Sbjct: 491 PADTSSKLAASDGDPVADPKLYRSLAGALQYL 522
>XP_013669093.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Brassica napus]
Length = 362
Score = 99.8 bits (247), Expect(2) = 2e-36
Identities = 50/112 (44%), Positives = 72/112 (64%)
Frame = +3
Query: 198 YSLIYFSVC**YNYSAFAINNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHY 377
Y L+Y S I+ I+SLSQ F++KDLGPL++FLG+EVQRSS G+ +SQ Y
Sbjct: 66 YMLVYVDDIIITGSSPQHIDQFINSLSQRFSIKDLGPLSYFLGIEVQRSSNGLHLSQHRY 125
Query: 378 IDDLVAKAGMHNVNPIATPLSPSTPLTKSDGPLFIDTTKYHQLVGALQYILL 533
I DL+ + M N ++TP+ P+T L+ + G + D T+Y VG+LQY+ L
Sbjct: 126 ITDLLQRMQMSTTNSVSTPMCPNTTLSLTSGSVMDDPTRYRMAVGSLQYLSL 177
Score = 80.1 bits (196), Expect(2) = 2e-36
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +1
Query: 13 MVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLFIFNQ 192
M QPPGF D P+ VC L+K++YGLKQAPRAWY+ L TFL + GF +S D SLF++N
Sbjct: 1 MAQPPGFVDKDNPNAVCKLRKAIYGLKQAPRAWYNELRTFLLQSGFINSLADASLFVYNT 60
Query: 193 HDIH 204
+ ++
Sbjct: 61 NGVY 64
>XP_019105930.1 PREDICTED: uncharacterized protein LOC109135359 [Beta vulgaris
subsp. vulgaris]
Length = 391
Score = 90.9 bits (224), Expect(2) = 4e-36
Identities = 45/97 (46%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Frame = +3
Query: 261 LISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVNPIATPLS 440
+IS L EFA+ DLGPL++FLG+ V R+S +F+SQK Y ++++ +A M + NP ATP+
Sbjct: 87 IISLLRSEFAMTDLGPLSYFLGISVTRTSKHMFLSQKKYAEEILDRANMSSCNPCATPVD 146
Query: 441 PSTPLTKSDGPLFIDTTKYHQLVGALQYILL--PELS 545
L+ S GP D T Y QL GALQY+ P++S
Sbjct: 147 TKAKLSASSGPPMKDPTLYRQLAGALQYLTFTRPDIS 183
Score = 88.2 bits (217), Expect(2) = 4e-36
Identities = 41/60 (68%), Positives = 46/60 (76%)
Frame = +1
Query: 13 MVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLFIFNQ 192
M QPPGF+D T P VCLL+KSLYGLKQAPRAWY +T+L GF SSKCD SLFIF +
Sbjct: 1 MFQPPGFQDSTNPKGVCLLQKSLYGLKQAPRAWYQRFATYLLSIGFVSSKCDPSLFIFRR 60
>XP_018852596.1 PREDICTED: uncharacterized protein LOC109014546 [Juglans regia]
Length = 323
Score = 96.7 bits (239), Expect(2) = 4e-36
Identities = 49/106 (46%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
Frame = +3
Query: 234 NYSAFAINNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHN 413
N S F + ++I L ++F++KDLG L+FFLG+EV + G+F+SQ YI DL+AK M
Sbjct: 79 NNSTF-VASIIEKLGKQFSIKDLGSLHFFLGVEVLPTKNGLFLSQHKYIRDLLAKTSMDG 137
Query: 414 VNPIATPLSPSTPLTKSDGPLFIDTTKYHQLVGALQYILL--PELS 545
+ TPLS S PL SDG +D+T+Y +++GALQY+ L P++S
Sbjct: 138 AKDVTTPLSTSVPLKLSDGSSSVDSTEYRRVIGALQYLSLTQPDIS 183
Score = 82.4 bits (202), Expect(2) = 4e-36
Identities = 36/59 (61%), Positives = 46/59 (77%)
Frame = +1
Query: 13 MVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLFIFN 189
M QPPGF++P KP+HVC L K++YGLKQAPRAWYS L L GF ++K D+SLF+F+
Sbjct: 1 MKQPPGFKNPEKPNHVCCLTKAIYGLKQAPRAWYSALKQALLAFGFINAKSDSSLFVFH 59
>XP_017179455.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Malus domestica]
Length = 429
Score = 92.8 bits (229), Expect(2) = 5e-36
Identities = 54/103 (52%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Frame = +3
Query: 243 AFAINNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVNP 422
A A IS LS F +KDLGPL++FLGLE+ RSS+G+F+SQ YI DL+ K+ M P
Sbjct: 111 ARACQATISQLSALFPIKDLGPLHYFLGLEIHRSSSGIFLSQTKYILDLLQKSKMDGAKP 170
Query: 423 IATPLSPSTPLTKSDGPLFIDTTKYHQLVGALQYIL--LPELS 545
ATPLS S+PL D P D T+Y LVG LQY+ P+LS
Sbjct: 171 CATPLS-SSPL-DHDSPFLSDPTEYRSLVGGLQYLTWSRPDLS 211
Score = 85.9 bits (211), Expect(2) = 5e-36
Identities = 41/61 (67%), Positives = 45/61 (73%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V MVQP GF DPTKP HVC L KSLYGLKQAPRAWY L + L+ GFH S+ D SLF
Sbjct: 28 ESVFMVQPSGFEDPTKPTHVCRLHKSLYGLKQAPRAWYEKLYSALSSLGFHGSQNDHSLF 87
Query: 181 I 183
+
Sbjct: 88 V 88
>XP_010684978.1 PREDICTED: uncharacterized protein LOC104899479 [Beta vulgaris subsp.
vulgaris]
Length = 1367
Score = 92.0 bits (227), Expect(2) = 2e-35
Identities = 42/62 (67%), Positives = 49/62 (79%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V M QPPGFRDPT PD+VC L+KSLYGLKQAPRAWY +T+L+ GFH S+ D SLF
Sbjct: 973 ETVFMHQPPGFRDPTHPDYVCRLRKSLYGLKQAPRAWYQRFATYLSTFGFHHSQSDHSLF 1032
Query: 181 IF 186
I+
Sbjct: 1033 IY 1034
Score = 84.3 bits (207), Expect(2) = 2e-35
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Frame = +3
Query: 261 LISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVNPIATPLS 440
++S L+ EFA+ DLGPL++FLG+ V +++ G+F+SQK Y +++ +A M + P ATP+
Sbjct: 1063 IMSHLNAEFAMTDLGPLSYFLGISVTKTAGGLFLSQKKYAAEILERANMSSCKPSATPVD 1122
Query: 441 PSTPLTKSDGPLFIDTTKYHQLVGALQYILL--PELS 545
L+ S GP D T + L GALQY+ P++S
Sbjct: 1123 TKAKLSASSGPSVADPTLFRSLAGALQYLTFTRPDIS 1159
>XP_019108082.1 PREDICTED: uncharacterized protein LOC109136435 [Beta vulgaris
subsp. vulgaris]
Length = 417
Score = 94.7 bits (234), Expect(2) = 2e-35
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V+M QPPGF+D TKP HVCLL+KSLYGLKQAPRAWY +T++ GF SSKCD SLF
Sbjct: 105 ETVYMFQPPGFQDYTKPKHVCLLQKSLYGLKQAPRAWYQRFATYILSIGFVSSKCDPSLF 164
Query: 181 IF 186
I+
Sbjct: 165 IY 166
Score = 81.6 bits (200), Expect(2) = 2e-35
Identities = 39/89 (43%), Positives = 59/89 (66%)
Frame = +3
Query: 261 LISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVNPIATPLS 440
+I+ L EFA+ LGPL++FLG+ V+ +S +F+SQ Y ++++A+A M + NP ATP+
Sbjct: 195 IIALLRAEFAMTYLGPLSYFLGISVKHTSQHMFLSQTKYAEEILARAHMSSCNPCATPVD 254
Query: 441 PSTPLTKSDGPLFIDTTKYHQLVGALQYI 527
L+ S+GP D T Y QL ALQY+
Sbjct: 255 TKAKLSASNGPPMQDPTLYRQLASALQYL 283
>JAU04955.1 Copia protein, partial [Noccaea caerulescens]
Length = 817
Score = 96.7 bits (239), Expect(2) = 3e-35
Identities = 46/64 (71%), Positives = 49/64 (76%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V+M QPPGF DPTKPDHVCLLKKSLYGLKQAPRAWY S +K GF +SK D SLF
Sbjct: 431 ETVYMHQPPGFTDPTKPDHVCLLKKSLYGLKQAPRAWYQRFSQAASKIGFKNSKSDASLF 490
Query: 181 IFNQ 192
I Q
Sbjct: 491 ILRQ 494
Score = 79.3 bits (194), Expect(2) = 3e-35
Identities = 41/110 (37%), Positives = 62/110 (56%)
Frame = +3
Query: 198 YSLIYFSVC**YNYSAFAINNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHY 377
Y L+Y + S + ++++ L EF + DLG L+FFLG+ V R+ G+ +SQ +Y
Sbjct: 500 YLLLYVDDIVLTSSSPTLLRSILTFLKTEFQMTDLGSLHFFLGISVSRNKNGMTLSQHNY 559
Query: 378 IDDLVAKAGMHNVNPIATPLSPSTPLTKSDGPLFIDTTKYHQLVGALQYI 527
D++ +A M N P +TP+ S L G F D T Y +L GALQY+
Sbjct: 560 AADILHRANMSNCKPCSTPVDTSAKLHADAGQPFSDPTMYRRLAGALQYL 609
>XP_018831842.1 PREDICTED: uncharacterized protein LOC108999403 [Juglans regia]
Length = 269
Score = 97.1 bits (240), Expect(2) = 3e-35
Identities = 49/94 (52%), Positives = 65/94 (69%)
Frame = +3
Query: 252 INNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVNPIAT 431
I+ I+ L QEF++KDLG LN+FLGLEV S G+F+SQ Y D++ +A +H+ PIAT
Sbjct: 84 IDTFINKLRQEFSMKDLGNLNYFLGLEVTHSKKGMFLSQVKYARDILIRADLHDSKPIAT 143
Query: 432 PLSPSTPLTKSDGPLFIDTTKYHQLVGALQYILL 533
P+ S LT +DGPLF T Y LVGALQY+ +
Sbjct: 144 PMIVSNHLT-TDGPLFHSPTTYQSLVGALQYLTI 176
Score = 79.0 bits (193), Expect(2) = 3e-35
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 13 MVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLFI 183
M QPPG+ D + P+HVC LKK++YGLKQAPRAW+ S FL K GF+ SK D+SLF+
Sbjct: 1 MEQPPGYIDASHPNHVCRLKKAIYGLKQAPRAWFHRFSHFLIKIGFNGSKADSSLFV 57
>JAU20527.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 248
Score = 97.4 bits (241), Expect(2) = 3e-35
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V+M QPPGF D TKPDHVCLLK+S+YGLKQAPRAWY+ +T+ K GFH SK D SLF
Sbjct: 25 ETVYMFQPPGFVDKTKPDHVCLLKRSIYGLKQAPRAWYNRFATYARKIGFHQSKLDQSLF 84
Query: 181 IFNQ 192
I +Q
Sbjct: 85 IMSQ 88
Score = 78.6 bits (192), Expect(2) = 3e-35
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Frame = +3
Query: 252 INNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVNPIAT 431
+ +I++L+ EF + DLGP++ FLG+ V R S G+ ++Q++Y D++ +A M NP T
Sbjct: 112 LTQIIANLNHEFEMSDLGPVHHFLGIHVTRDSNGIILTQQNYAADILHRADMTGCNPCLT 171
Query: 432 PLSPSTPLTKSDGPLFIDTTKYHQLVGALQYILL--PELS 545
P ++ LT G D + Y L GALQY+ P++S
Sbjct: 172 PADTNSKLTAESGKPVADPSLYRSLAGALQYLTFTRPDIS 211
>BAB90546.1 putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 89.4 bits (220), Expect(2) = 5e-35
Identities = 43/67 (64%), Positives = 50/67 (74%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V+M QPPGF +KPD+VC L K+LYGLKQAPRAWYS LS LT+ GF +SK DTSLF
Sbjct: 1060 EEVYMQQPPGFESSSKPDYVCKLNKALYGLKQAPRAWYSRLSKKLTELGFEASKADTSLF 1119
Query: 181 IFNQHDI 201
N+ I
Sbjct: 1120 FLNKGGI 1126
Score = 85.9 bits (211), Expect(2) = 5e-35
Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Frame = +3
Query: 249 AINNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVNPIA 428
A L+ L++EF LKDLG L++FLG+EV + S GV ++Q+ Y +D++ + M N P++
Sbjct: 1146 ATTALLKDLNKEFTLKDLGDLHYFLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCKPVS 1205
Query: 429 TPLSPSTPLTKSDG-PLF-IDTTKYHQLVGALQYILL 533
TPLS S LT +G PL D T+Y +VGALQY+ L
Sbjct: 1206 TPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTL 1242
>XP_019186544.1 PREDICTED: uncharacterized protein LOC109181247 [Ipomoea nil]
Length = 448
Score = 90.1 bits (222), Expect(2) = 5e-35
Identities = 46/104 (44%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
Frame = +3
Query: 240 SAFAINNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVN 419
SA IN L+ L+ F ++DLG +FFLG+E+ +S GV +SQ+ Y++D++ +AGM +
Sbjct: 166 SATLINTLLCYLATAFKIRDLGKPSFFLGIEMVDTSAGVILSQRRYMNDILNRAGMVDCK 225
Query: 420 PIATPLSPSTPLTKSDGPLFIDTTKYHQLVGALQYILL--PELS 545
P++TP S + P+T SD P F + T+Y ++VGALQY+ + P+LS
Sbjct: 226 PLSTPASTTQPVTPSDEP-FDNPTQYRRIVGALQYLTITRPDLS 268
Score = 85.1 bits (209), Expect(2) = 5e-35
Identities = 38/63 (60%), Positives = 46/63 (73%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V+M QPPG+ DP PDHVC L++SLYGLKQAPRAW+ L FL GF +SK D SLF
Sbjct: 83 ETVYMKQPPGYEDPAHPDHVCHLQRSLYGLKQAPRAWFKPLHDFLLTTGFSASKTDVSLF 142
Query: 181 IFN 189
++
Sbjct: 143 YYS 145
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch AAA57005.1
copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1439
Score = 90.9 bits (224), Expect(2) = 7e-35
Identities = 51/123 (41%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Frame = +3
Query: 189 SA*YSLIYFSVC**YNYSAFAINNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQ 368
+A Y L+Y S AI+N+++ L +FA+KDLG L++FLG+EV R G+ + Q
Sbjct: 1111 TAIYILVYVDDIIITGSSPHAIDNVLAKLKDDFAIKDLGDLHYFLGIEVHRKGDGLLLCQ 1170
Query: 369 KHYIDDLVAKAGMHNVNPIATPLSPSTPLTKSDGPLFI--DTTKYHQLVGALQYILL--P 536
+ Y DL+ + GM P+ TP++ S L+ S G L +TTKY +VGALQY+ L P
Sbjct: 1171 EKYARDLLKRVGMECCKPVHTPVATSEKLSASAGTLLSPEETTKYRSVVGALQYLTLTRP 1230
Query: 537 ELS 545
+LS
Sbjct: 1231 DLS 1233
Score = 84.0 bits (206), Expect(2) = 7e-35
Identities = 41/65 (63%), Positives = 46/65 (70%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V+M QPPGF D T P++ C L+KSLYGLKQ PRAWYS LS L GF SK D SLF
Sbjct: 1045 ETVYMKQPPGFADTTHPNYHCHLQKSLYGLKQRPRAWYSRLSEKLQSLGFVPSKADVSLF 1104
Query: 181 IFNQH 195
I+N H
Sbjct: 1105 IYNAH 1109
>XP_019106791.1 PREDICTED: uncharacterized protein LOC104900682 [Beta vulgaris subsp.
vulgaris]
Length = 4742
Score = 93.2 bits (230), Expect(2) = 9e-35
Identities = 41/92 (44%), Positives = 67/92 (72%)
Frame = +3
Query: 252 INNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVNPIAT 431
+++ I++L F+LKDLG L++FLG+EVQ ++ G+F+SQ+ YI DL+ +A M + P+ T
Sbjct: 1216 VSSFIAALGDRFSLKDLGSLSYFLGVEVQPTTRGIFLSQRKYIMDLLTRAHMSDAKPVTT 1275
Query: 432 PLSPSTPLTKSDGPLFIDTTKYHQLVGALQYI 527
P+ P++ L+ DGP + T+Y LVG+LQY+
Sbjct: 1276 PMDPNSSLSLHDGPPHDNPTEYRTLVGSLQYL 1307
Score = 81.3 bits (199), Expect(2) = 9e-35
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V M QPPGF DPT+P HVC L+K++YGLKQAPRAWY+ L ++L + GF + DTSLF
Sbjct: 1130 ENVFMSQPPGFVDPTRPTHVCRLRKAIYGLKQAPRAWYTELKSYLLQAGFVNCLSDTSLF 1189
>AAX96193.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1621
Score = 94.0 bits (232), Expect(2) = 9e-35
Identities = 45/67 (67%), Positives = 50/67 (74%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V+M+QPPGF DPTKP HVC L K+LYGLKQAPRAW+S LS L GF SK DTSLF
Sbjct: 787 EEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLF 846
Query: 181 IFNQHDI 201
N+ DI
Sbjct: 847 FLNKGDI 853
Score = 80.5 bits (197), Expect(2) = 9e-35
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = +3
Query: 261 LISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVNPIATPLS 440
L+ +L EFALKDLG L++FLG+EV + G+ ++Q Y +DL+ K GM + P TPLS
Sbjct: 877 LLQNLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLS 936
Query: 441 PSTPLTKSDGPLF--IDTTKYHQLVGALQYILL 533
S L+ +G L D + Y +VGALQY+ L
Sbjct: 937 VSEKLSLHEGSLLGPEDASHYRSVVGALQYLTL 969
>OMO81232.1 Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
capsularis]
Length = 1619
Score = 87.8 bits (216), Expect(2) = 9e-35
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Frame = +3
Query: 252 INNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVNPIAT 431
I+ ++SLS++F+LKD PL++FLG+E ++TG+F+SQ+ Y+ DL+ + M + P+ T
Sbjct: 737 ISEFVNSLSRKFSLKDPAPLSYFLGIETNFTATGLFLSQQKYVKDLLQRTNMTDCKPVQT 796
Query: 432 PLSPSTPLTKSDGPLFIDTTKYHQLVGALQYILL--PELS 545
P++ S G L D T+Y ++G LQY+LL P++S
Sbjct: 797 PMATSASRLLHGGNLLADATEYRSIIGTLQYLLLTRPDIS 836
Score = 86.7 bits (213), Expect(2) = 9e-35
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V M QPPGF D + PD+VC L+K++YGLKQAPRAWY+ LSTFL GF+ S+ D+SLF
Sbjct: 650 EDVFMKQPPGFVDSSHPDYVCKLEKAIYGLKQAPRAWYNELSTFLVDFGFNQSRSDSSLF 709
Query: 181 IFNQHDI 201
I+ DI
Sbjct: 710 IYINKDI 716
>AAT93988.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1480
Score = 93.6 bits (231), Expect(2) = 9e-35
Identities = 48/104 (46%), Positives = 70/104 (67%), Gaps = 2/104 (1%)
Frame = +3
Query: 240 SAFAINNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVN 419
SA ++++ + L EFA+ DLG L+FFLG+ V RSS G+F+SQ+ Y+ DL+ +AGM +
Sbjct: 1169 SATLLHHITARLHSEFAMTDLGDLHFFLGISVTRSSDGLFLSQRQYVVDLLKRAGMSECH 1228
Query: 420 PIATPLSPSTPLTKSDGPLFIDTTKYHQLVGALQYILL--PELS 545
ATP+ + L+ +DG D T+Y LVGALQY+ L PEL+
Sbjct: 1229 STATPVDARSKLSATDGAPVSDPTEYRSLVGALQYLTLTRPELA 1272
Score = 80.9 bits (198), Expect(2) = 9e-35
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V+ QP GF DP+ P+ VCLL+KSLYGLKQAPRAWY +T++ + GF SS +TSLF
Sbjct: 1086 ETVYYQQPSGFVDPSAPNAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASNTSLF 1145
Query: 181 IFNQHD 198
++ D
Sbjct: 1146 VYKDGD 1151
>BAH93014.1 Os05g0235100, partial [Oryza sativa Japonica Group]
Length = 841
Score = 93.6 bits (231), Expect(2) = 9e-35
Identities = 48/104 (46%), Positives = 70/104 (67%), Gaps = 2/104 (1%)
Frame = +3
Query: 240 SAFAINNLISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVN 419
SA ++++ + L EFA+ DLG L+FFLG+ V RSS G+F+SQ+ Y+ DL+ +AGM +
Sbjct: 530 SATLLHHITARLHSEFAMTDLGDLHFFLGISVTRSSDGLFLSQRQYVVDLLKRAGMSECH 589
Query: 420 PIATPLSPSTPLTKSDGPLFIDTTKYHQLVGALQYILL--PELS 545
ATP+ + L+ +DG D T+Y LVGALQY+ L PEL+
Sbjct: 590 STATPVDARSKLSATDGAPVSDPTEYRSLVGALQYLTLTRPELA 633
Score = 80.9 bits (198), Expect(2) = 9e-35
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V+ QP GF DP+ P+ VCLL+KSLYGLKQAPRAWY +T++ + GF SS +TSLF
Sbjct: 447 ETVYYQQPSGFVDPSAPNAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASNTSLF 506
Query: 181 IFNQHD 198
++ D
Sbjct: 507 VYKDGD 512
>ABA98286.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 94.0 bits (232), Expect(2) = 1e-34
Identities = 45/67 (67%), Positives = 50/67 (74%)
Frame = +1
Query: 1 EIVHMVQPPGFRDPTKPDHVCLLKKSLYGLKQAPRAWYSCLSTFLTKQGFHSSKCDTSLF 180
E V+M+QPPGF DPTKP HVC L K+LYGLKQAPRAW+S LS L GF SK DTSLF
Sbjct: 1058 EEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLF 1117
Query: 181 IFNQHDI 201
N+ DI
Sbjct: 1118 FLNKGDI 1124
Score = 80.1 bits (196), Expect(2) = 1e-34
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Frame = +3
Query: 261 LISSLSQEFALKDLGPLNFFLGLEVQRSSTGVFISQKHYIDDLVAKAGMHNVNPIATPLS 440
L+ L EFALKDLG L++FLG+EV + G+ ++Q Y +DL+ K GM + P TPLS
Sbjct: 1148 LLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLS 1207
Query: 441 PSTPLTKSDGPLF--IDTTKYHQLVGALQYILL 533
S L+ +G L D + Y +VGALQY+ L
Sbjct: 1208 VSEKLSLHEGSLLGPEDASHYRSVVGALQYLTL 1240