BLASTX nr result

ID: Panax25_contig00046501 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00046501
         (375 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EOY03309.1 H0502G05.11 protein [Theobroma cacao]                       57   8e-07
EOY23098.1 Retrotransposon, unclassified-like protein [Theobroma...    57   8e-07

>EOY03309.1 H0502G05.11 protein [Theobroma cacao]
          Length = 1352

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
 Frame = +2

Query: 14  VHDKPLPNHKG-KETCNTVIHSTGPXXXXXXXXXXXCDPGLQVTT-----LMNGAKFRNF 175
           V + PLP H   +   + +IH+               +   +VT+     LM    FR+F
Sbjct: 419 VQNNPLPIHPNPRGQVSAIIHAHHDDPSSSNTQFNDANEATRVTSSIANSLMKTPSFRHF 478

Query: 176 FDQIGLAKEARIEATRAIIK-AAETQETCMAISKGFMKTMEEEENKISFSKADREIRYP- 349
           FDQ+G ++EAR EA  ++++ A E    C  I +   K +   +N I F++AD    +P 
Sbjct: 479 FDQLGFSEEARKEAAISLVQIAGEQYGECNLIERPMGKMVGAYKNAIVFTEADMCTPHPY 538

Query: 350 HNRPLYV 370
           HN+PLYV
Sbjct: 539 HNKPLYV 545


>EOY23098.1 Retrotransposon, unclassified-like protein [Theobroma cacao]
          Length = 1609

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
 Frame = +2

Query: 14  VHDKPLPNHKG-KETCNTVIHSTGPXXXXXXXXXXXCDPGLQVTT-----LMNGAKFRNF 175
           V + PLP H   +   + +IH+               +   +VT+     LM    FR+F
Sbjct: 454 VQNNPLPIHPNPRGQVSAIIHAHHDDPSSSNTQFNDANEATRVTSSIANSLMKTPSFRHF 513

Query: 176 FDQIGLAKEARIEATRAIIK-AAETQETCMAISKGFMKTMEEEENKISFSKADREIRYP- 349
           FDQ+G ++EAR EA  ++++ A E    C  I +   K +   +N I F++AD    +P 
Sbjct: 514 FDQLGFSEEARKEAAISLVQIAGEQYGECNLIGRPMGKMVGAYKNAIVFTEADMCTPHPY 573

Query: 350 HNRPLYV 370
           HN+PLYV
Sbjct: 574 HNKPLYV 580


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