BLASTX nr result

ID: Panax25_contig00046003 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00046003
         (364 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017219521.1 PREDICTED: AT-rich interactive domain-containing ...    65   1e-09
KZN11965.1 hypothetical protein DCAR_004621 [Daucus carota subsp...    60   4e-08
XP_017239555.1 PREDICTED: AT-rich interactive domain-containing ...    60   4e-08
XP_010255292.1 PREDICTED: AT-rich interactive domain-containing ...    55   2e-06

>XP_017219521.1 PREDICTED: AT-rich interactive domain-containing protein 2-like
           [Daucus carota subsp. sativus] XP_017219529.1 PREDICTED:
           AT-rich interactive domain-containing protein 2-like
           [Daucus carota subsp. sativus] XP_017219538.1 PREDICTED:
           AT-rich interactive domain-containing protein 2-like
           [Daucus carota subsp. sativus] KZN07956.1 hypothetical
           protein DCAR_000625 [Daucus carota subsp. sativus]
          Length = 742

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 35/66 (53%), Positives = 42/66 (63%)
 Frame = -2

Query: 204 MAGWSKSKHGLELKNSKIDQGYESNNVLCFDLDFAANDGVFDDCKDRLRSLFDQVIPIFL 25
           MAGWSK K  L L  +  +   E + +   +L F   D +F DCKD L SLFDQVIPIFL
Sbjct: 1   MAGWSKPKDILAL--TSYETNCEGHKMPGDNLGFTVKDRIFHDCKDDLESLFDQVIPIFL 58

Query: 24  REVSVD 7
           RE+SVD
Sbjct: 59  REISVD 64


>KZN11965.1 hypothetical protein DCAR_004621 [Daucus carota subsp. sativus]
          Length = 756

 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 33/67 (49%), Positives = 43/67 (64%)
 Frame = -2

Query: 204 MAGWSKSKHGLELKNSKIDQGYESNNVLCFDLDFAANDGVFDDCKDRLRSLFDQVIPIFL 25
           MA  S+ K  LE  N  ++  + +++V CF  DF   DGV D+CK  L  +FDQVIPI+L
Sbjct: 1   MAILSRLKDELECGNDGLN--HVNHSVSCFYQDFGLKDGVLDECKGTLERVFDQVIPIYL 58

Query: 24  REVSVDK 4
           REVSV K
Sbjct: 59  REVSVGK 65


>XP_017239555.1 PREDICTED: AT-rich interactive domain-containing protein 2-like
           [Daucus carota subsp. sativus]
          Length = 791

 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 33/67 (49%), Positives = 43/67 (64%)
 Frame = -2

Query: 204 MAGWSKSKHGLELKNSKIDQGYESNNVLCFDLDFAANDGVFDDCKDRLRSLFDQVIPIFL 25
           MA  S+ K  LE  N  ++  + +++V CF  DF   DGV D+CK  L  +FDQVIPI+L
Sbjct: 1   MAILSRLKDELECGNDGLN--HVNHSVSCFYQDFGLKDGVLDECKGTLERVFDQVIPIYL 58

Query: 24  REVSVDK 4
           REVSV K
Sbjct: 59  REVSVGK 65


>XP_010255292.1 PREDICTED: AT-rich interactive domain-containing protein 2 [Nelumbo
           nucifera] XP_010255293.1 PREDICTED: AT-rich interactive
           domain-containing protein 2 [Nelumbo nucifera]
          Length = 611

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 27/64 (42%), Positives = 39/64 (60%)
 Frame = -2

Query: 204 MAGWSKSKHGLELKNSKIDQGYESNNVLCFDLDFAANDGVFDDCKDRLRSLFDQVIPIFL 25
           MAGWS    G  L  +++ +  +SN   C DLD +    V   CKD+LR LFDQ++ +FL
Sbjct: 1   MAGWSILTDGSALDRAEVLRHLQSNG-FCLDLDASLKGSVDSGCKDKLRCLFDQILSVFL 59

Query: 24  REVS 13
           +E+S
Sbjct: 60  KEIS 63


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