BLASTX nr result

ID: Panax25_contig00044754 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00044754
         (485 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDO97897.1 unnamed protein product [Coffea canephora]                  54   3e-06
GAV84918.1 Ribosomal_L34 domain-containing protein [Cephalotus f...    54   4e-06
KVH92981.1 Ribosomal protein L34 [Cynara cardunculus var. scolymus]    54   5e-06
XP_018848580.1 PREDICTED: uncharacterized protein LOC109011732 [...    53   7e-06

>CDO97897.1 unnamed protein product [Coffea canephora]
          Length = 146

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -1

Query: 485 RVSSQGFLYPCGLPSLRFFLPDGTLSLSTLPII 387
           ++SSQGFLYPCGLPSL FFLPDG  S+S+ P++
Sbjct: 68  KLSSQGFLYPCGLPSLPFFLPDGNDSMSSEPMV 100


>GAV84918.1 Ribosomal_L34 domain-containing protein [Cephalotus follicularis]
          Length = 133

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -1

Query: 485 RVSSQGFLYPCGLPSLRFFLPDGTLSLSTLPII*KKT 375
           RVSSQGFLYPCGLPSL F+LPDG LS   + +  K+T
Sbjct: 57  RVSSQGFLYPCGLPSLPFYLPDGDLSDEPMLLFPKRT 93


>KVH92981.1 Ribosomal protein L34 [Cynara cardunculus var. scolymus]
          Length = 146

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = -1

Query: 485 RVSSQGFLYPCGLPSLRFFLPDGTLSLSTLPII 387
           RVSS+GFLYPCGLPSLRFFLPDG  S  + P++
Sbjct: 69  RVSSEGFLYPCGLPSLRFFLPDGDDSSLSEPLL 101


>XP_018848580.1 PREDICTED: uncharacterized protein LOC109011732 [Juglans regia]
           XP_018848581.1 PREDICTED: uncharacterized protein
           LOC109011732 [Juglans regia]
          Length = 146

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = -1

Query: 485 RVSSQGFLYPCGLPSLRFFLPDGTLSLSTLPII 387
           + +S+GFLYPCGLPSLRFFLPDG +S S  P++
Sbjct: 68  KATSEGFLYPCGLPSLRFFLPDGDVSSSNEPML 100


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