BLASTX nr result

ID: Panax25_contig00043987 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00043987
         (351 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009611149.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p...    59   9e-08
CAN72198.1 hypothetical protein VITISV_014982 [Vitis vinifera]         55   2e-06
XP_002273769.1 PREDICTED: uncharacterized protein LOC100248988 [...    55   2e-06
XP_008340242.1 PREDICTED: uncharacterized protein LOC103403187 [...    55   2e-06
XP_004310104.1 PREDICTED: uncharacterized protein LOC101292083 [...    54   4e-06
XP_019261373.1 PREDICTED: uncharacterized protein LOC109239288 [...    53   8e-06
XP_009776973.1 PREDICTED: uncharacterized protein LOC104226642 [...    53   8e-06
XP_009343158.1 PREDICTED: uncharacterized protein LOC103935126 [...    53   8e-06

>XP_009611149.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC104104713 [Nicotiana tomentosiformis]
          Length = 272

 Score = 58.5 bits (140), Expect = 9e-08
 Identities = 34/62 (54%), Positives = 39/62 (62%)
 Frame = +1

Query: 166 MSGVSLAVASHSEPDQTTTSTTNPXXXXXXXXXXXXXXXXXXSALGSLKVIELQLVAFIM 345
           MSGVSLAVA HSEPD+ T+S+T P                    +GSL+VIELQLVAFIM
Sbjct: 1   MSGVSLAVAPHSEPDERTSSSTKP-----QQIKERNPQQQAVGVMGSLRVIELQLVAFIM 55

Query: 346 VF 351
           VF
Sbjct: 56  VF 57


>CAN72198.1 hypothetical protein VITISV_014982 [Vitis vinifera]
          Length = 279

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 31/62 (50%), Positives = 36/62 (58%)
 Frame = +1

Query: 166 MSGVSLAVASHSEPDQTTTSTTNPXXXXXXXXXXXXXXXXXXSALGSLKVIELQLVAFIM 345
           MSGVSLAVA  +EPD+TTT+                        +GSL+VIELQLVAFIM
Sbjct: 1   MSGVSLAVAPRTEPDKTTTTPNTKPQQQPGRHNHHQQQSVVGGVMGSLRVIELQLVAFIM 60

Query: 346 VF 351
           VF
Sbjct: 61  VF 62


>XP_002273769.1 PREDICTED: uncharacterized protein LOC100248988 [Vitis vinifera]
           XP_010656202.1 PREDICTED: uncharacterized protein
           LOC100248988 [Vitis vinifera] CBI27685.3 unnamed protein
           product, partial [Vitis vinifera]
          Length = 279

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 31/62 (50%), Positives = 36/62 (58%)
 Frame = +1

Query: 166 MSGVSLAVASHSEPDQTTTSTTNPXXXXXXXXXXXXXXXXXXSALGSLKVIELQLVAFIM 345
           MSGVSLAVA  +EPD+TTT+                        +GSL+VIELQLVAFIM
Sbjct: 1   MSGVSLAVAPRTEPDKTTTTPNTKPQQQPGRHNHHHQQSVVGGVMGSLRVIELQLVAFIM 60

Query: 346 VF 351
           VF
Sbjct: 61  VF 62


>XP_008340242.1 PREDICTED: uncharacterized protein LOC103403187 [Malus domestica]
           XP_017179287.1 PREDICTED: uncharacterized protein
           LOC103403187 [Malus domestica]
          Length = 280

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 34/63 (53%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +1

Query: 166 MSGVSLAVASHSEPDQTTTSTT-NPXXXXXXXXXXXXXXXXXXSALGSLKVIELQLVAFI 342
           MSGVSLAVA  SEPD TTT+TT                       +GSL+VIELQLVAFI
Sbjct: 1   MSGVSLAVAPRSEPDTTTTTTTPGSKPQEKPLHRQQHQQPAVGGVMGSLRVIELQLVAFI 60

Query: 343 MVF 351
           MVF
Sbjct: 61  MVF 63


>XP_004310104.1 PREDICTED: uncharacterized protein LOC101292083 [Fragaria vesca
           subsp. vesca] XP_011457502.1 PREDICTED: uncharacterized
           protein LOC101292083 [Fragaria vesca subsp. vesca]
           XP_011457503.1 PREDICTED: uncharacterized protein
           LOC101292083 [Fragaria vesca subsp. vesca]
          Length = 280

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 31/62 (50%), Positives = 36/62 (58%)
 Frame = +1

Query: 166 MSGVSLAVASHSEPDQTTTSTTNPXXXXXXXXXXXXXXXXXXSALGSLKVIELQLVAFIM 345
           MSGVS+AVA  SEPD+TTT+                        +GSL+VIELQLVAFIM
Sbjct: 1   MSGVSVAVAPRSEPDKTTTAGPKHQEKPQRLLHQQQQQPAVGGVMGSLRVIELQLVAFIM 60

Query: 346 VF 351
           VF
Sbjct: 61  VF 62


>XP_019261373.1 PREDICTED: uncharacterized protein LOC109239288 [Nicotiana
           attenuata] XP_019261374.1 PREDICTED: uncharacterized
           protein LOC109239288 [Nicotiana attenuata]
           XP_019261375.1 PREDICTED: uncharacterized protein
           LOC109239288 [Nicotiana attenuata] OIT38539.1
           hypothetical protein A4A49_08317 [Nicotiana attenuata]
          Length = 273

 Score = 53.1 bits (126), Expect = 8e-06
 Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 166 MSGVSLAVASHSEPD-QTTTSTTNPXXXXXXXXXXXXXXXXXXSALGSLKVIELQLVAFI 342
           MSGVSLAVA  SEPD +TT+S+T P                    +GSL+VIELQLVAFI
Sbjct: 1   MSGVSLAVAPRSEPDHETTSSSTKPQQIKERNPQQQAV-----GVMGSLRVIELQLVAFI 55

Query: 343 MVF 351
           MVF
Sbjct: 56  MVF 58


>XP_009776973.1 PREDICTED: uncharacterized protein LOC104226642 [Nicotiana
           sylvestris] XP_009776974.1 PREDICTED: uncharacterized
           protein LOC104226642 [Nicotiana sylvestris]
           XP_009776975.1 PREDICTED: uncharacterized protein
           LOC104226642 [Nicotiana sylvestris] XP_016496528.1
           PREDICTED: uncharacterized protein LOC107815458
           [Nicotiana tabacum]
          Length = 273

 Score = 53.1 bits (126), Expect = 8e-06
 Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 166 MSGVSLAVASHSEPD-QTTTSTTNPXXXXXXXXXXXXXXXXXXSALGSLKVIELQLVAFI 342
           MSGVSLAVA  SEPD +TT+S+T P                    +GSL+VIELQLVAFI
Sbjct: 1   MSGVSLAVAPRSEPDHETTSSSTKPQQIKERNPQQQAV-----GVMGSLRVIELQLVAFI 55

Query: 343 MVF 351
           MVF
Sbjct: 56  MVF 58


>XP_009343158.1 PREDICTED: uncharacterized protein LOC103935126 [Pyrus x
           bretschneideri]
          Length = 278

 Score = 53.1 bits (126), Expect = 8e-06
 Identities = 33/62 (53%), Positives = 36/62 (58%)
 Frame = +1

Query: 166 MSGVSLAVASHSEPDQTTTSTTNPXXXXXXXXXXXXXXXXXXSALGSLKVIELQLVAFIM 345
           MSGVSLAVA  SEPD TTT+T                       +GSL+VIELQLVAFIM
Sbjct: 1   MSGVSLAVAPRSEPD-TTTTTPGSKPQQKPLRRQQHQQPAVGGVMGSLRVIELQLVAFIM 59

Query: 346 VF 351
           VF
Sbjct: 60  VF 61


Top