BLASTX nr result
ID: Panax25_contig00043782
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00043782
(365 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011080369.1 PREDICTED: zinc finger CCCH domain-containing pro... 110 2e-32
XP_006365191.1 PREDICTED: zinc finger CCCH domain-containing pro... 106 2e-29
XP_006365192.1 PREDICTED: zinc finger CCCH domain-containing pro... 106 2e-29
XP_006365193.1 PREDICTED: zinc finger CCCH domain-containing pro... 106 2e-29
OMO54480.1 hypothetical protein COLO4_36466 [Corchorus olitorius] 102 2e-29
CDP09294.1 unnamed protein product [Coffea canephora] 113 4e-29
KJB35741.1 hypothetical protein B456_006G126400 [Gossypium raimo... 106 1e-28
XP_017611711.1 PREDICTED: zinc finger CCCH domain-containing pro... 106 1e-28
XP_012485359.1 PREDICTED: zinc finger CCCH domain-containing pro... 106 1e-28
OMO81783.1 hypothetical protein CCACVL1_12217 [Corchorus capsula... 102 1e-28
XP_019236871.1 PREDICTED: zinc finger CCCH domain-containing pro... 108 1e-28
XP_012858109.1 PREDICTED: zinc finger CCCH domain-containing pro... 115 1e-28
XP_011080366.1 PREDICTED: zinc finger CCCH domain-containing pro... 109 1e-28
EYU46228.1 hypothetical protein MIMGU_mgv1a002914mg [Erythranthe... 115 1e-28
XP_002513525.1 PREDICTED: zinc finger CCCH domain-containing pro... 108 2e-28
XP_010313260.1 PREDICTED: zinc finger CCCH domain-containing pro... 105 2e-28
XP_004291762.1 PREDICTED: zinc finger CCCH domain-containing pro... 105 2e-28
XP_004250919.1 PREDICTED: zinc finger CCCH domain-containing pro... 105 2e-28
XP_010313261.1 PREDICTED: zinc finger CCCH domain-containing pro... 105 2e-28
XP_011459489.1 PREDICTED: zinc finger CCCH domain-containing pro... 105 2e-28
>XP_011080369.1 PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Sesamum indicum]
Length = 676
Score = 110 bits (274), Expect(2) = 2e-32
Identities = 54/71 (76%), Positives = 61/71 (85%), Gaps = 6/71 (8%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQQ-----MERGEFPACLSPSGLDSRE-PYDLPF 162
KGNPHFVCDSRVLVKPYKEKGKIPDKKQQ +ERGEF ACLSPSG+DSR+ DLPF
Sbjct: 399 KGNPHFVCDSRVLVKPYKEKGKIPDKKQQQQQQHLERGEFSACLSPSGIDSRDHNIDLPF 458
Query: 163 GGRLVYSSQEM 195
G R+++S+QEM
Sbjct: 459 GSRMLFSTQEM 469
Score = 56.2 bits (134), Expect(2) = 2e-32
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQE 361
R+MN QL DL N H NH P L A + I SP Q+ +NQ+ V A DAINQE
Sbjct: 491 RMMNLQLMDLKNQHNNHHFLPSLRAGISISSPRQSQLLMNQNFVAASDAINQE 543
>XP_006365191.1 PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X1
[Solanum tuberosum]
Length = 701
Score = 106 bits (264), Expect(2) = 2e-29
Identities = 50/72 (69%), Positives = 57/72 (79%), Gaps = 7/72 (9%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQ-------QMERGEFPACLSPSGLDSREPYDLP 159
KGNPHFVCDSRVLVKPYKEKGKI DKKQ ++RGE CLSPS L+SR+PYDLP
Sbjct: 424 KGNPHFVCDSRVLVKPYKEKGKIADKKQLQQQQQHPIDRGELSTCLSPSALESRDPYDLP 483
Query: 160 FGGRLVYSSQEM 195
FG R++Y+S EM
Sbjct: 484 FGARMLYNSHEM 495
Score = 50.1 bits (118), Expect(2) = 2e-29
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RLMN QL DL N H N P L +P+ S Q HSQ N ++V L+ I+QEV
Sbjct: 517 RLMNLQLLDLKNQHRNDHFPPSLSPGLPMASQMQFHSQNNHNIVPVLNDIDQEV 570
>XP_006365192.1 PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X2
[Solanum tuberosum]
Length = 695
Score = 106 bits (264), Expect(2) = 2e-29
Identities = 50/72 (69%), Positives = 57/72 (79%), Gaps = 7/72 (9%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQ-------QMERGEFPACLSPSGLDSREPYDLP 159
KGNPHFVCDSRVLVKPYKEKGKI DKKQ ++RGE CLSPS L+SR+PYDLP
Sbjct: 424 KGNPHFVCDSRVLVKPYKEKGKIADKKQLQQQQQHPIDRGELSTCLSPSALESRDPYDLP 483
Query: 160 FGGRLVYSSQEM 195
FG R++Y+S EM
Sbjct: 484 FGARMLYNSHEM 495
Score = 50.1 bits (118), Expect(2) = 2e-29
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RLMN QL DL N H N P L +P+ S Q HSQ N ++V L+ I+QEV
Sbjct: 517 RLMNLQLLDLKNQHRNDHFPPSLSPGLPMASQMQFHSQNNHNIVPVLNDIDQEV 570
>XP_006365193.1 PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X3
[Solanum tuberosum]
Length = 692
Score = 106 bits (264), Expect(2) = 2e-29
Identities = 50/72 (69%), Positives = 57/72 (79%), Gaps = 7/72 (9%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQ-------QMERGEFPACLSPSGLDSREPYDLP 159
KGNPHFVCDSRVLVKPYKEKGKI DKKQ ++RGE CLSPS L+SR+PYDLP
Sbjct: 424 KGNPHFVCDSRVLVKPYKEKGKIADKKQLQQQQQHPIDRGELSTCLSPSALESRDPYDLP 483
Query: 160 FGGRLVYSSQEM 195
FG R++Y+S EM
Sbjct: 484 FGARMLYNSHEM 495
Score = 50.1 bits (118), Expect(2) = 2e-29
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RLMN QL DL N H N P L +P+ S Q HSQ N ++V L+ I+QEV
Sbjct: 517 RLMNLQLLDLKNQHRNDHFPPSLSPGLPMASQMQFHSQNNHNIVPVLNDIDQEV 570
>OMO54480.1 hypothetical protein COLO4_36466 [Corchorus olitorius]
Length = 662
Score = 102 bits (254), Expect(2) = 2e-29
Identities = 48/70 (68%), Positives = 56/70 (80%), Gaps = 5/70 (7%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKK-----QQMERGEFPACLSPSGLDSREPYDLPFG 165
KGNPHFVCDSRVLVKPYKEKGK+ +KK QQ+ERGE+ C SPS LDSREP+DL G
Sbjct: 381 KGNPHFVCDSRVLVKPYKEKGKVQEKKQQQQQQQLERGEYSNCSSPSALDSREPFDLHLG 440
Query: 166 GRLVYSSQEM 195
R+ Y++QEM
Sbjct: 441 ARMFYNTQEM 450
Score = 53.9 bits (128), Expect(2) = 2e-29
Identities = 28/54 (51%), Positives = 34/54 (62%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RLMN QL D NNH + Q P L PIPSPT +H+ NQ+L+ D I+QEV
Sbjct: 472 RLMNLQLLDFKNNH-HPQFHPGLSTGSPIPSPTVSHASNNQALIFPADGIDQEV 524
>CDP09294.1 unnamed protein product [Coffea canephora]
Length = 699
Score = 113 bits (282), Expect(2) = 4e-29
Identities = 51/71 (71%), Positives = 60/71 (84%), Gaps = 6/71 (8%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQ------QMERGEFPACLSPSGLDSREPYDLPF 162
KGNPHFVCDSRVLVKPYKEKGK+PDKKQ ++RG+F CLSPSGL+SREPYDLPF
Sbjct: 427 KGNPHFVCDSRVLVKPYKEKGKVPDKKQHQQQQPHLDRGDFSGCLSPSGLESREPYDLPF 486
Query: 163 GGRLVYSSQEM 195
G R+ Y++QE+
Sbjct: 487 GARMFYNTQEI 497
Score = 42.4 bits (98), Expect(2) = 4e-29
Identities = 25/54 (46%), Positives = 30/54 (55%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RL N + + + QLQP L V IPSP+Q SQINQ L+ D IN EV
Sbjct: 519 RLFNMRFME---KNQGQQLQPGTLQGVSIPSPSQPLSQINQDLILPSDGINLEV 569
>KJB35741.1 hypothetical protein B456_006G126400 [Gossypium raimondii]
Length = 713
Score = 106 bits (264), Expect(2) = 1e-28
Identities = 49/67 (73%), Positives = 57/67 (85%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQQM--ERGEFPACLSPSGLDSREPYDLPFGGRL 174
KGNPHFVCDSRVLVKPYKEKGK+ +KKQQ ERGE+ AC SPSG+DSREP+DL G R+
Sbjct: 415 KGNPHFVCDSRVLVKPYKEKGKVQEKKQQQQSERGEYSACSSPSGVDSREPFDLHLGSRM 474
Query: 175 VYSSQEM 195
Y++QEM
Sbjct: 475 FYNTQEM 481
Score = 47.8 bits (112), Expect(2) = 1e-28
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQE 361
RLMN QL DL N+H + Q Q A P+PSPT + + NQ+L+ +D I+QE
Sbjct: 503 RLMNLQLLDLKNHH-HSQFQHGFSTASPVPSPTVSRTPNNQALIFPVDGIDQE 554
>XP_017611711.1 PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Gossypium arboreum]
Length = 689
Score = 106 bits (264), Expect(2) = 1e-28
Identities = 49/67 (73%), Positives = 57/67 (85%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQQM--ERGEFPACLSPSGLDSREPYDLPFGGRL 174
KGNPHFVCDSRVLVKPYKEKGK+ +KKQQ ERGE+ AC SPSG+DSREP+DL G R+
Sbjct: 415 KGNPHFVCDSRVLVKPYKEKGKVQEKKQQQQSERGEYSACSSPSGVDSREPFDLHLGSRM 474
Query: 175 VYSSQEM 195
Y++QEM
Sbjct: 475 FYNTQEM 481
Score = 47.8 bits (112), Expect(2) = 1e-28
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQE 361
RLMN QL DL N+H + Q Q A P+PSPT + + NQ+L+ +D I+QE
Sbjct: 503 RLMNLQLLDLKNHH-HSQFQHGFSTASPVPSPTVSRTPNNQALIFPVDGIDQE 554
>XP_012485359.1 PREDICTED: zinc finger CCCH domain-containing protein 53 [Gossypium
raimondii] XP_016671721.1 PREDICTED: zinc finger CCCH
domain-containing protein 53-like [Gossypium hirsutum]
KJB35740.1 hypothetical protein B456_006G126400
[Gossypium raimondii]
Length = 689
Score = 106 bits (264), Expect(2) = 1e-28
Identities = 49/67 (73%), Positives = 57/67 (85%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQQM--ERGEFPACLSPSGLDSREPYDLPFGGRL 174
KGNPHFVCDSRVLVKPYKEKGK+ +KKQQ ERGE+ AC SPSG+DSREP+DL G R+
Sbjct: 415 KGNPHFVCDSRVLVKPYKEKGKVQEKKQQQQSERGEYSACSSPSGVDSREPFDLHLGSRM 474
Query: 175 VYSSQEM 195
Y++QEM
Sbjct: 475 FYNTQEM 481
Score = 47.8 bits (112), Expect(2) = 1e-28
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQE 361
RLMN QL DL N+H + Q Q A P+PSPT + + NQ+L+ +D I+QE
Sbjct: 503 RLMNLQLLDLKNHH-HSQFQHGFSTASPVPSPTVSRTPNNQALIFPVDGIDQE 554
>OMO81783.1 hypothetical protein CCACVL1_12217 [Corchorus capsularis]
Length = 689
Score = 102 bits (254), Expect(2) = 1e-28
Identities = 48/70 (68%), Positives = 56/70 (80%), Gaps = 5/70 (7%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKK-----QQMERGEFPACLSPSGLDSREPYDLPFG 165
KGNPHFVCDSRVLVKPYKEKGK+ +KK QQ+ERGE+ C SPS LDSREP+DL G
Sbjct: 406 KGNPHFVCDSRVLVKPYKEKGKVQEKKQQQQQQQLERGEYSNCSSPSALDSREPFDLHLG 465
Query: 166 GRLVYSSQEM 195
R+ Y++QEM
Sbjct: 466 ARMFYNTQEM 475
Score = 51.6 bits (122), Expect(2) = 1e-28
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RLMN QL D NNH + Q P L PIPSPT +H+ N +L+ D I+QEV
Sbjct: 497 RLMNLQLLDFKNNH-HPQFHPGLSTGSPIPSPTVSHASNNPALIFPADGIDQEV 549
>XP_019236871.1 PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Nicotiana attenuata]
Length = 721
Score = 108 bits (271), Expect(2) = 1e-28
Identities = 51/70 (72%), Positives = 56/70 (80%), Gaps = 5/70 (7%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQ-----QMERGEFPACLSPSGLDSREPYDLPFG 165
KGNPHFVCDSRVLVKPYKEKGK+ DKKQ M+RGE CLSPS L+SREPYDLPFG
Sbjct: 447 KGNPHFVCDSRVLVKPYKEKGKVADKKQLQQQHSMDRGELSTCLSPSALESREPYDLPFG 506
Query: 166 GRLVYSSQEM 195
R+ Y+S EM
Sbjct: 507 ARMFYNSHEM 516
Score = 44.7 bits (104), Expect(2) = 1e-28
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RLMN QL DL N H N Q L A++P S Q HSQ + SLV + ++E+
Sbjct: 538 RLMNLQLMDLKNQHRNDQFPSSLSASLPTASEMQFHSQNSHSLVPLSNGNDEEI 591
>XP_012858109.1 PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Erythranthe guttata] XP_012858178.1 PREDICTED: zinc
finger CCCH domain-containing protein 22-like
[Erythranthe guttata]
Length = 654
Score = 115 bits (288), Expect(2) = 1e-28
Identities = 51/65 (78%), Positives = 58/65 (89%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQQMERGEFPACLSPSGLDSREPYDLPFGGRLVY 180
KGNPHFVCDSRVLVKPYKEKGK+PDKKQ +ERGEF +CLSPS +DSRE DLPFG R+++
Sbjct: 401 KGNPHFVCDSRVLVKPYKEKGKVPDKKQHLERGEFSSCLSPSAIDSREHIDLPFGSRMLF 460
Query: 181 SSQEM 195
S QEM
Sbjct: 461 SPQEM 465
Score = 38.1 bits (87), Expect(2) = 1e-28
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 203 RLMNFQLPDLT-NNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQE 361
R+MN QL +L N+H N+ L P ++ SP Q+ INQ+ +A D+ NQE
Sbjct: 487 RMMNLQLMELKQNHHHNNILHPSFIS-----SPRQSQLPINQNFTNASDSFNQE 535
>XP_011080366.1 PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Sesamum indicum]
Length = 642
Score = 109 bits (272), Expect(2) = 1e-28
Identities = 52/69 (75%), Positives = 61/69 (88%), Gaps = 4/69 (5%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQQ---MERGEFPACLSPSGLDSREPYD-LPFGG 168
KGNPHFVCDSRVLVKPYKEKGK+ +KKQQ +ERGE+ ACLSPSG+DSREP+D LPFG
Sbjct: 385 KGNPHFVCDSRVLVKPYKEKGKVREKKQQQQHLERGEYSACLSPSGVDSREPFDHLPFGS 444
Query: 169 RLVYSSQEM 195
R+++S QEM
Sbjct: 445 RMLFSPQEM 453
Score = 44.3 bits (103), Expect(2) = 1e-28
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQE 361
R+MN QL DL N + NH + +P SP Q+ +NQ + + D+INQE
Sbjct: 475 RMMNLQLMDLKNQNHNHHYLQSIQPGIPYSSPRQSRLLMNQHVTTSSDSINQE 527
>EYU46228.1 hypothetical protein MIMGU_mgv1a002914mg [Erythranthe guttata]
Length = 626
Score = 115 bits (288), Expect(2) = 1e-28
Identities = 51/65 (78%), Positives = 58/65 (89%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQQMERGEFPACLSPSGLDSREPYDLPFGGRLVY 180
KGNPHFVCDSRVLVKPYKEKGK+PDKKQ +ERGEF +CLSPS +DSRE DLPFG R+++
Sbjct: 401 KGNPHFVCDSRVLVKPYKEKGKVPDKKQHLERGEFSSCLSPSAIDSREHIDLPFGSRMLF 460
Query: 181 SSQEM 195
S QEM
Sbjct: 461 SPQEM 465
Score = 38.1 bits (87), Expect(2) = 1e-28
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 203 RLMNFQLPDLT-NNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQE 361
R+MN QL +L N+H N+ L P ++ SP Q+ INQ+ +A D+ NQE
Sbjct: 487 RMMNLQLMELKQNHHHNNILHPSFIS-----SPRQSQLPINQNFTNASDSFNQE 535
>XP_002513525.1 PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X2
[Ricinus communis] EEF48928.1 nucleic acid binding
protein, putative [Ricinus communis]
Length = 700
Score = 108 bits (270), Expect(2) = 2e-28
Identities = 51/70 (72%), Positives = 58/70 (82%), Gaps = 5/70 (7%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKK-----QQMERGEFPACLSPSGLDSREPYDLPFG 165
KGNPHFVCDSRVLVKPYKEKGK+PDKK QQMERG++ AC SPSGLDSREP+DL G
Sbjct: 425 KGNPHFVCDSRVLVKPYKEKGKVPDKKQPHQQQQMERGDYSACSSPSGLDSREPFDLHLG 484
Query: 166 GRLVYSSQEM 195
R+ ++QEM
Sbjct: 485 ARMFQNTQEM 494
Score = 44.7 bits (104), Expect(2) = 2e-28
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RLMN QL D NH +HQ L P+PSPT + + +Q+L+ D I+QEV
Sbjct: 516 RLMNLQLLDF-KNHNHHQFLHGLSTGSPVPSPTPSRTPNSQTLIFQPDGIDQEV 568
>XP_010313260.1 PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X1
[Solanum lycopersicum]
Length = 697
Score = 105 bits (261), Expect(2) = 2e-28
Identities = 49/71 (69%), Positives = 57/71 (80%), Gaps = 6/71 (8%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQ------QMERGEFPACLSPSGLDSREPYDLPF 162
KGNPHFVCDSRVLVKPYKEKGKI DKKQ ++RG+ CLSPS L+SREP+DLPF
Sbjct: 421 KGNPHFVCDSRVLVKPYKEKGKIADKKQLQQQQHPIDRGDLSTCLSPSALESREPFDLPF 480
Query: 163 GGRLVYSSQEM 195
G R++Y+S EM
Sbjct: 481 GARMLYNSHEM 491
Score = 47.8 bits (112), Expect(2) = 2e-28
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RLMN QL DL N H N P L +P S Q HS N +LV L+ I+QEV
Sbjct: 513 RLMNLQLLDLKNQHRNDHFPPSLSPGLPTASQMQFHSPNNHNLVPVLNDIDQEV 566
>XP_004291762.1 PREDICTED: zinc finger CCCH domain-containing protein 55-like
isoform X1 [Fragaria vesca subsp. vesca]
Length = 695
Score = 105 bits (263), Expect(2) = 2e-28
Identities = 47/67 (70%), Positives = 58/67 (86%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQQ--MERGEFPACLSPSGLDSREPYDLPFGGRL 174
KGNPHF+C+SRVLVKPYKEKGK+ DK+QQ ERGEF CLSP+GLDSR+PY+L GGR+
Sbjct: 441 KGNPHFICESRVLVKPYKEKGKVLDKRQQQHQERGEFSPCLSPAGLDSRDPYELQLGGRM 500
Query: 175 VYSSQEM 195
++ +QEM
Sbjct: 501 LFDTQEM 507
Score = 47.0 bits (110), Expect(2) = 2e-28
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +2
Query: 203 RLMNFQLPDLTNNH-PNHQLQPH---LLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RLMN QLPD NN P H + H L P+P Q+H+QINQ+++ D+ QEV
Sbjct: 529 RLMNLQLPDFKNNRLPQHYIPHHFRSLSMGAPVPLSPQSHAQINQNVI-PFDSFKQEV 585
>XP_004250919.1 PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X2
[Solanum lycopersicum]
Length = 691
Score = 105 bits (261), Expect(2) = 2e-28
Identities = 49/71 (69%), Positives = 57/71 (80%), Gaps = 6/71 (8%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQ------QMERGEFPACLSPSGLDSREPYDLPF 162
KGNPHFVCDSRVLVKPYKEKGKI DKKQ ++RG+ CLSPS L+SREP+DLPF
Sbjct: 421 KGNPHFVCDSRVLVKPYKEKGKIADKKQLQQQQHPIDRGDLSTCLSPSALESREPFDLPF 480
Query: 163 GGRLVYSSQEM 195
G R++Y+S EM
Sbjct: 481 GARMLYNSHEM 491
Score = 47.8 bits (112), Expect(2) = 2e-28
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RLMN QL DL N H N P L +P S Q HS N +LV L+ I+QEV
Sbjct: 513 RLMNLQLLDLKNQHRNDHFPPSLSPGLPTASQMQFHSPNNHNLVPVLNDIDQEV 566
>XP_010313261.1 PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X3
[Solanum lycopersicum]
Length = 688
Score = 105 bits (261), Expect(2) = 2e-28
Identities = 49/71 (69%), Positives = 57/71 (80%), Gaps = 6/71 (8%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQ------QMERGEFPACLSPSGLDSREPYDLPF 162
KGNPHFVCDSRVLVKPYKEKGKI DKKQ ++RG+ CLSPS L+SREP+DLPF
Sbjct: 421 KGNPHFVCDSRVLVKPYKEKGKIADKKQLQQQQHPIDRGDLSTCLSPSALESREPFDLPF 480
Query: 163 GGRLVYSSQEM 195
G R++Y+S EM
Sbjct: 481 GARMLYNSHEM 491
Score = 47.8 bits (112), Expect(2) = 2e-28
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = +2
Query: 203 RLMNFQLPDLTNNHPNHQLQPHLLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RLMN QL DL N H N P L +P S Q HS N +LV L+ I+QEV
Sbjct: 513 RLMNLQLLDLKNQHRNDHFPPSLSPGLPTASQMQFHSPNNHNLVPVLNDIDQEV 566
>XP_011459489.1 PREDICTED: zinc finger CCCH domain-containing protein 46-like
isoform X2 [Fragaria vesca subsp. vesca] XP_011459490.1
PREDICTED: zinc finger CCCH domain-containing protein
46-like isoform X3 [Fragaria vesca subsp. vesca]
Length = 684
Score = 105 bits (263), Expect(2) = 2e-28
Identities = 47/67 (70%), Positives = 58/67 (86%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 KGNPHFVCDSRVLVKPYKEKGKIPDKKQQ--MERGEFPACLSPSGLDSREPYDLPFGGRL 174
KGNPHF+C+SRVLVKPYKEKGK+ DK+QQ ERGEF CLSP+GLDSR+PY+L GGR+
Sbjct: 441 KGNPHFICESRVLVKPYKEKGKVLDKRQQQHQERGEFSPCLSPAGLDSRDPYELQLGGRM 500
Query: 175 VYSSQEM 195
++ +QEM
Sbjct: 501 LFDTQEM 507
Score = 47.0 bits (110), Expect(2) = 2e-28
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +2
Query: 203 RLMNFQLPDLTNNH-PNHQLQPH---LLAAVPIPSPTQAHSQINQSLVHALDAINQEV 364
RLMN QLPD NN P H + H L P+P Q+H+QINQ+++ D+ QEV
Sbjct: 529 RLMNLQLPDFKNNRLPQHYIPHHFRSLSMGAPVPLSPQSHAQINQNVI-PFDSFKQEV 585