BLASTX nr result
ID: Panax25_contig00043714
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00043714
(613 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017226162.1 PREDICTED: pentatricopeptide repeat-containing pr... 59 5e-12
XP_008341045.1 PREDICTED: pentatricopeptide repeat-containing pr... 59 1e-11
XP_010278168.1 PREDICTED: pentatricopeptide repeat-containing pr... 56 1e-09
XP_009781131.1 PREDICTED: pentatricopeptide repeat-containing pr... 58 2e-09
XP_019259398.1 PREDICTED: pentatricopeptide repeat-containing pr... 54 2e-08
KVH87730.1 Pentatricopeptide repeat-containing protein [Cynara c... 63 3e-08
XP_016575364.1 PREDICTED: pentatricopeptide repeat-containing pr... 63 4e-08
XP_015077918.1 PREDICTED: pentatricopeptide repeat-containing pr... 63 5e-08
XP_007034952.2 PREDICTED: pentatricopeptide repeat-containing pr... 54 7e-08
EOY05877.1 Tetratricopeptide repeat-like superfamily protein iso... 54 7e-08
OMO95593.1 hypothetical protein COLO4_15769 [Corchorus olitorius] 50 1e-07
ONI26475.1 hypothetical protein PRUPE_1G027400 [Prunus persica] 61 2e-07
XP_007226853.1 hypothetical protein PRUPE_ppa017194mg, partial [... 61 2e-07
XP_008224187.1 PREDICTED: pentatricopeptide repeat-containing pr... 61 2e-07
XP_015876501.1 PREDICTED: pentatricopeptide repeat-containing pr... 55 3e-07
XP_016573228.1 PREDICTED: pentatricopeptide repeat-containing pr... 60 3e-07
XP_016573223.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide... 60 3e-07
CBI26355.3 unnamed protein product, partial [Vitis vinifera] 60 4e-07
XP_002280144.2 PREDICTED: pentatricopeptide repeat-containing pr... 60 4e-07
XP_006350660.1 PREDICTED: pentatricopeptide repeat-containing pr... 58 4e-07
>XP_017226162.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Daucus carota subsp. sativus]
Length = 638
Score = 59.3 bits (142), Expect(3) = 5e-12
Identities = 31/61 (50%), Positives = 41/61 (67%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
++L ELFKIEPD+ GNYI LSNIYA++G+WR V+ VR MI+ +R+ G S
Sbjct: 542 VELAEIAAAELFKIEPDNSGNYILLSNIYASAGRWRDVSNVRAMIRS---QRVRKNRGSS 598
Query: 209 W 211
W
Sbjct: 599 W 599
Score = 34.3 bits (77), Expect(3) = 5e-12
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 222 EFDMGDISLMHVDEIYSILNLLRDVM*LAYI 314
EF M D S H D+IYSIL LL + M L+Y+
Sbjct: 608 EFVMADNSHRHADDIYSILELLTEDMQLSYV 638
Score = 24.3 bits (51), Expect(3) = 5e-12
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1
Query: 4 ASVVRGALLAASSVH 48
+SVV GALLAA SVH
Sbjct: 525 SSVVWGALLAACSVH 539
>XP_008341045.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Malus domestica]
Length = 658
Score = 58.9 bits (141), Expect(3) = 1e-11
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG 175
+QL ELFKIEPD+ GNYI LSN YAA+G W VA VR +I+E+G
Sbjct: 542 VQLAEVAAAELFKIEPDNSGNYILLSNTYAAAGMWDGVAKVRALIREHG 590
Score = 30.0 bits (66), Expect(3) = 1e-11
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 175 LRKNRGSSWIELG 213
+RKNRGSSWIELG
Sbjct: 591 VRKNRGSSWIELG 603
Score = 27.7 bits (60), Expect(3) = 1e-11
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 222 EFDMGDISLMHVDEIYSILNLLRDVM 299
EF MGD+S + IY +L+LLR+ M
Sbjct: 608 EFVMGDMSHFDSERIYLVLDLLREDM 633
>XP_010278168.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Nelumbo nucifera]
Length = 655
Score = 55.8 bits (133), Expect(2) = 1e-09
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKE 169
++L ++LFKIEP++ GNY+ LSNIYAA+G+W VA VR MI+E
Sbjct: 541 VELAEVAASQLFKIEPENSGNYVLLSNIYAAAGRWDDVAKVRAMIRE 587
Score = 34.3 bits (77), Expect(2) = 1e-09
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 172 RLRKNRGSSWIELGSVV 222
R+RKNR SSWIELGSVV
Sbjct: 589 RVRKNRASSWIELGSVV 605
>XP_009781131.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Nicotiana sylvestris]
Length = 683
Score = 58.2 bits (139), Expect(3) = 2e-09
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKEN 172
+Q+ +ELFKIEP++ GNYI LSNIYA +G+WR VA VR MI+E+
Sbjct: 542 VQMAEIAASELFKIEPENSGNYILLSNIYADAGRWRDVARVRAMIREH 589
Score = 30.4 bits (67), Expect(3) = 2e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 175 LRKNRGSSWIELGSVV 222
+RKNRGSSWIEL S V
Sbjct: 591 VRKNRGSSWIELDSAV 606
Score = 20.4 bits (41), Expect(3) = 2e-09
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 7 SVVRGALLAASSVH 48
S V GA+LAA +VH
Sbjct: 526 SAVWGAMLAACNVH 539
>XP_019259398.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Nicotiana attenuata] OIT39870.1
pentatricopeptide repeat-containing protein [Nicotiana
attenuata]
Length = 668
Score = 53.5 bits (127), Expect(3) = 2e-08
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKEN 172
+Q+ +ELFKIEP++ GNYI LSNIYA + +WR VA VR +I+E+
Sbjct: 542 VQMAEIAASELFKIEPENSGNYILLSNIYADARRWRDVARVRAVIREH 589
Score = 30.4 bits (67), Expect(3) = 2e-08
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 175 LRKNRGSSWIELGSVV 222
+RKNRGSSWIEL S V
Sbjct: 591 VRKNRGSSWIELDSAV 606
Score = 21.2 bits (43), Expect(3) = 2e-08
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 7 SVVRGALLAASSVH 48
S V GA+LAA S+H
Sbjct: 526 SAVWGAMLAACSIH 539
>KVH87730.1 Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 531
Score = 63.2 bits (152), Expect = 3e-08
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
++L TELFKI+PD+ GNY+ LSN+YAASG+W VA VR MI+ N R++ G S
Sbjct: 436 IELAEAAATELFKIDPDNSGNYVLLSNLYAASGEWHNVAKVRAMIRLN---RVKKNRGSS 492
Query: 209 W 211
W
Sbjct: 493 W 493
>XP_016575364.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Capsicum annuum]
Length = 381
Score = 62.8 bits (151), Expect = 4e-08
Identities = 34/63 (53%), Positives = 45/63 (71%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
+QL +ELFKIEP++ N I LSNIYAA+G+WR VA VR +I+E+ ++I L GLS
Sbjct: 314 VQLAEIASSELFKIEPENSRNCILLSNIYAAAGKWRDVARVRALIREHHVKKIGDLAGLS 373
Query: 209 WDL 217
W L
Sbjct: 374 WVL 376
>XP_015077918.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum pennellii]
Length = 668
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
+Q+ TELFKIEPD+ GNYI LSNIYAA+G+WR VA VR +I+E+ ++ G S
Sbjct: 542 VQMAEVAATELFKIEPDNSGNYILLSNIYAAAGRWRDVARVRALIREH---HVKKNRGSS 598
Query: 209 W 211
W
Sbjct: 599 W 599
>XP_007034952.2 PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Theobroma cacao] XP_017975632.1 PREDICTED:
pentatricopeptide repeat-containing protein At4g02750
[Theobroma cacao]
Length = 683
Score = 53.5 bits (127), Expect(2) = 7e-08
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKEN 172
+QL ELFKIEPD+ GNYI LSN YAA+ +W VA +R MI++N
Sbjct: 558 VQLAEIAADELFKIEPDNSGNYILLSNTYAAARRWDGVARMRAMIRKN 605
Score = 30.8 bits (68), Expect(2) = 7e-08
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 172 RLRKNRGSSWIELGSVV 222
++RKNR SSWIELG VV
Sbjct: 606 QVRKNRASSWIELGCVV 622
>EOY05877.1 Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao] EOY05878.1 Tetratricopeptide
repeat-like superfamily protein isoform 1 [Theobroma
cacao]
Length = 683
Score = 53.5 bits (127), Expect(2) = 7e-08
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKEN 172
+QL ELFKIEPD+ GNYI LSN YAA+ +W VA +R MI++N
Sbjct: 558 VQLAEIAADELFKIEPDNSGNYILLSNTYAAARRWDGVARMRAMIRKN 605
Score = 30.8 bits (68), Expect(2) = 7e-08
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 172 RLRKNRGSSWIELGSVV 222
++RKNR SSWIELG VV
Sbjct: 606 QVRKNRASSWIELGCVV 622
>OMO95593.1 hypothetical protein COLO4_15769 [Corchorus olitorius]
Length = 653
Score = 50.4 bits (119), Expect(2) = 1e-07
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +2
Query: 56 ELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKEN 172
ELFKIEPD+ GNYI LS IYA++ +W VA +R MI++N
Sbjct: 551 ELFKIEPDNSGNYILLSGIYASARRWDGVARMRAMIRKN 589
Score = 32.7 bits (73), Expect(2) = 1e-07
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 172 RLRKNRGSSWIELGSVV 222
++RKNR SSWIELGSVV
Sbjct: 590 QVRKNRASSWIELGSVV 606
>ONI26475.1 hypothetical protein PRUPE_1G027400 [Prunus persica]
Length = 575
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
+QL +ELFKIEPD+ GNYI LSNIYAA+G+W VA VR +I+E+ R+ G S
Sbjct: 451 VQLAEVSASELFKIEPDNSGNYILLSNIYAAAGKWDGVAKVRALIREH---RVRKNRGSS 507
Query: 209 W 211
W
Sbjct: 508 W 508
>XP_007226853.1 hypothetical protein PRUPE_ppa017194mg, partial [Prunus persica]
Length = 584
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
+QL +ELFKIEPD+ GNYI LSNIYAA+G+W VA VR +I+E+ R+ G S
Sbjct: 488 VQLAEVSASELFKIEPDNSGNYILLSNIYAAAGKWDGVAKVRALIREH---RVRKNRGSS 544
Query: 209 W 211
W
Sbjct: 545 W 545
>XP_008224187.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Prunus mume]
Length = 667
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
+QL +ELFKIEPD+ GNYI LSNIYAA+G+W VA VR +I+E+ R+ G S
Sbjct: 542 VQLAEVSASELFKIEPDNSGNYILLSNIYAAAGKWDGVAKVRALIREH---RVRKNRGSS 598
Query: 209 W 211
W
Sbjct: 599 W 599
>XP_015876501.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like, partial [Ziziphus jujuba] XP_015868676.1
PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like, partial [Ziziphus jujuba]
Length = 674
Score = 55.5 bits (132), Expect(2) = 3e-07
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
+Q+ +ELFKIE + GNYI LSNIYAA+G+W V+ VR MI+E +R+ G S
Sbjct: 550 VQMAEVAASELFKIEQTNSGNYILLSNIYAAAGRWDGVSKVRAMIRE---QRVRKNKGSS 606
Query: 209 W 211
W
Sbjct: 607 W 607
Score = 26.6 bits (57), Expect(2) = 3e-07
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 222 EFDMGDISLMHVDEIYSILNLLR-DVM*LAYI 314
EF MGD S +++ IY +L+LLR D+ L Y+
Sbjct: 616 EFVMGDRSHSNLESIYLMLDLLRSDMKFLGYL 647
>XP_016573228.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Capsicum annuum]
Length = 669
Score = 59.7 bits (143), Expect(2) = 3e-07
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
+Q+ +ELFKIEP++ GNYI LSNIYAA+G+WR VA VR +I+E+ ++ G S
Sbjct: 543 VQMAEIAASELFKIEPENSGNYILLSNIYAAAGKWRDVARVRALIREH---HVKKNRGSS 599
Query: 209 W 211
W
Sbjct: 600 W 600
Score = 22.3 bits (46), Expect(2) = 3e-07
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 7 SVVRGALLAASSVH 48
S V GA+LAAS+VH
Sbjct: 527 SAVWGAMLAASNVH 540
>XP_016573223.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Capsicum annuum]
Length = 663
Score = 59.7 bits (143), Expect(2) = 3e-07
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
+Q+ +ELFKIEP++ GNYI LSNIYAA+G+WR VA VR +I+E+ ++ G S
Sbjct: 543 VQMAEIAASELFKIEPENSGNYILLSNIYAAAGKWRDVARVRALIREH---HVKKNRGSS 599
Query: 209 W 211
W
Sbjct: 600 W 600
Score = 22.3 bits (46), Expect(2) = 3e-07
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 7 SVVRGALLAASSVH 48
S V GA+LAAS+VH
Sbjct: 527 SAVWGAMLAASNVH 540
>CBI26355.3 unnamed protein product, partial [Vitis vinifera]
Length = 550
Score = 60.1 bits (144), Expect = 4e-07
Identities = 33/61 (54%), Positives = 40/61 (65%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
+QL ELFKIEPD+ GNYI LSNIYAA+G+W VA VR I+E+ R+ G S
Sbjct: 450 VQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREH---RVRKNRGSS 506
Query: 209 W 211
W
Sbjct: 507 W 507
>XP_002280144.2 PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 642
Score = 60.1 bits (144), Expect = 4e-07
Identities = 33/61 (54%), Positives = 40/61 (65%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
+QL ELFKIEPD+ GNYI LSNIYAA+G+W VA VR I+E+ R+ G S
Sbjct: 542 VQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREH---RVRKNRGSS 598
Query: 209 W 211
W
Sbjct: 599 W 599
>XP_006350660.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum tuberosum]
Length = 668
Score = 57.8 bits (138), Expect(2) = 4e-07
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +2
Query: 29 LQLPVCIVTELFKIEPDSFGNYIFLSNIYAASGQWRYVAVVR*MIKENG*ERIEVLVGLS 208
+Q+ +ELFKIEP++ GNYI LSNIYAA+G+W VA VR +I+E+ ++ G S
Sbjct: 542 VQMAEVAASELFKIEPENSGNYILLSNIYAAAGRWHDVARVRALIREH---HVKKNRGSS 598
Query: 209 W 211
W
Sbjct: 599 W 599
Score = 23.9 bits (50), Expect(2) = 4e-07
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 7 SVVRGALLAASSVHC 51
S V GA+LAA +VHC
Sbjct: 526 SAVWGAMLAACNVHC 540