BLASTX nr result
ID: Panax25_contig00043573
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00043573
(1491 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ADB85430.1 putative retrotransposon protein [Phyllostachys edulis] 97 6e-38
BAA22288.1 polyprotein [Oryza australiensis] 93 1e-36
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 94 6e-36
AAC26250.1 contains similarity to reverse transcriptase (Pfam: r... 95 1e-35
AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-clas... 94 1e-34
AAV85747.1 Integrase core domain, putative [Oryza sativa Japonic... 91 2e-34
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass... 93 3e-34
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group] 93 3e-34
KYP76577.1 Retrovirus-related Pol polyprotein from transposon TN... 97 9e-33
ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass... 89 3e-30
AAS01945.1 putative polyprotein [Oryza sativa Japonica Group] 89 3e-30
GAU49783.1 hypothetical protein TSUD_369070 [Trifolium subterran... 92 3e-28
ABA97342.2 retrotransposon protein, putative, Ty1-copia subclass... 71 1e-27
CAN69397.1 hypothetical protein VITISV_021035 [Vitis vinifera] 77 2e-27
CAD39797.2 OSJNBa0071G03.10 [Oryza sativa Japonica Group] 90 3e-26
AMY96445.1 gag/pol protein [Momordica dioica] 84 3e-26
ABF97078.1 retrotransposon protein, putative, Ty1-copia subclass... 93 1e-25
AAK52163.1 putative polyprotein [Oryza sativa Japonica Group] 93 1e-25
ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass... 93 2e-25
XP_017233167.1 PREDICTED: uncharacterized protein LOC108207215, ... 72 8e-25
>ADB85430.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 97.4 bits (241), Expect(5) = 6e-38
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYI-DILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F FI N EP VY +VSGS + +L+LY+ DIL + N++PMLESVK L K S DLG
Sbjct: 543 KRFGFIKNKEEPCVYMKVSGSTLVILILYVDDILLVGNDIPMLESVKSSLRKSFSMKDLG 602
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR-CXXXXXXXXXXXXXSP*T 687
+ +LGI+IY DR R++ L+Q YI +L F+M+NSKR P T
Sbjct: 603 DAAYILGIRIYRDRSKRLIGLSQEMYIDKVLNRFNMQNSKRGFLPMAHGINLSKNQCPTT 662
Query: 686 PEKRDRMSD 660
++RD+MSD
Sbjct: 663 TDERDKMSD 671
Score = 50.1 bits (118), Expect(5) = 6e-38
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYS---------REDHCKTVKNILKYLTGTKDVIKIY-GRSKLKL 512
+IMY + TRPD ++ S E H VKNILKYL TKDV +Y G +L +
Sbjct: 680 SIMYAMICTRPDVSYALSVTSRYQADPSEGHWTAVKNILKYLRRTKDVFLVYGGDEELVV 739
Query: 511 DGLTDSSF 488
+G TD+SF
Sbjct: 740 NGYTDASF 747
Score = 41.6 bits (96), Expect(5) = 6e-38
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+DD +S + LNGGAV+ K KQ+ VA + YIA +EAA
Sbjct: 747 FQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTEAEYIAASEAA 795
Score = 29.6 bits (65), Expect(5) = 6e-38
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDE 1046
GLKQAS+ WNI FDE
Sbjct: 526 GLKQASRSWNIRFDE 540
Score = 29.6 bits (65), Expect(5) = 6e-38
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 293 KSHLGSKHVLWDFHLIIGIIDRWEITI 213
+SH SKH+L +HLI ++DR ++ I
Sbjct: 835 RSHQKSKHILRRYHLIRELVDRGDVKI 861
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 92.8 bits (229), Expect(5) = 1e-36
Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F FI N E VYK+VSGS + L+LY+D IL I N++PMLESVK L S DLG
Sbjct: 963 KGFGFIKNEEEACVYKKVSGSAIVFLILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLG 1022
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ +LGI+IY DR R++ L+Q TYI +LK F+M +SK+
Sbjct: 1023 EAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMHDSKK 1063
Score = 48.9 bits (115), Expect(5) = 1e-36
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIY-GRSKLKL 512
+IMY + TRPD ++ S E H VKNILKYL TKD+ +Y G L +
Sbjct: 1100 SIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYGGEEDLVV 1159
Query: 511 DGLTDSSF 488
G TD+SF
Sbjct: 1160 SGYTDASF 1167
Score = 40.8 bits (94), Expect(5) = 1e-36
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+DD +S + LNGGAV+ K KQ VA + YIA +EAA
Sbjct: 1167 FQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAA 1215
Score = 32.0 bits (71), Expect(5) = 1e-36
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 22/60 (36%)
Frame = -2
Query: 326 EKFISELGIVL----------------------KSHLGSKHVLWDFHLIIGIIDRWEITI 213
+KF+SELG++ +SH SKH+L +HLI I+DR ++ I
Sbjct: 1222 KKFVSELGVMTSTTGPMSLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREIVDRGDVKI 1281
Score = 29.6 bits (65), Expect(5) = 1e-36
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDE 1046
GLKQAS+ WNI FDE
Sbjct: 946 GLKQASRSWNIRFDE 960
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 94.4 bits (233), Expect(5) = 6e-36
Identities = 56/128 (43%), Positives = 78/128 (60%), Gaps = 3/128 (2%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYI-DILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F F+ N EP VY +VSGS + +L+LY+ DIL I N++PMLESVK L S DLG
Sbjct: 959 KRFGFVKNKEEPCVYMKVSGSTLVILILYVDDILLIGNDIPMLESVKASLKNSFSMKDLG 1018
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR-CXXXXXXXXXXXXXSP*T 687
+ +LGI+IY DR R++ L+Q TYI +L F+M+N+K+ P T
Sbjct: 1019 EAAYILGIKIYRDRSRRLIGLSQSTYIDKVLIRFNMQNTKKGFLPMSHGISPSKSQRPST 1078
Query: 686 PEKRDRMS 663
++RDRM+
Sbjct: 1079 TDERDRMN 1086
Score = 44.7 bits (104), Expect(5) = 6e-36
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYS---------REDHCKTVKNILKYLTGTKDVIKIY-GRSKLKL 512
+IMY + TR D ++ S E H VKNILKYL TKD IY G +L +
Sbjct: 1096 SIMYAMICTRQDVSYALSVTSRYQADPGECHWTAVKNILKYLRRTKDAFLIYGGDEELVV 1155
Query: 511 DGLTDSSF 488
+G TD+SF
Sbjct: 1156 NGYTDASF 1163
Score = 43.1 bits (100), Expect(5) = 6e-36
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+DD +S + LNGGAV+ K KQ+ VA K YIA +EAA
Sbjct: 1163 FQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTKAEYIAASEAA 1211
Score = 29.6 bits (65), Expect(5) = 6e-36
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDE 1046
GLKQAS+ WNI FDE
Sbjct: 942 GLKQASRSWNIRFDE 956
Score = 29.6 bits (65), Expect(5) = 6e-36
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 293 KSHLGSKHVLWDFHLIIGIIDRWEITI 213
+SH SKH+L +HLI ++DR ++ I
Sbjct: 1251 RSHQKSKHILRRYHLIRELVDRGDVKI 1277
>AAC26250.1 contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] CAB80804.1 putative
retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 94.7 bits (234), Expect(5) = 1e-35
Identities = 57/128 (44%), Positives = 79/128 (61%), Gaps = 3/128 (2%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYI-DILRIRNNMPMLESVKIKLSKHSSTNDLG 861
KEFDFI N EP VYK+ SGS V LVLY+ DIL + N++P+L+SVK L S D+G
Sbjct: 610 KEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMG 669
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR-CXXXXXXXXXXXXXSP*T 687
+ +LGI+IY DR N+++ L+Q TYI +L F+M +SK+ P T
Sbjct: 670 EAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPST 729
Query: 686 PEKRDRMS 663
++R+RMS
Sbjct: 730 HDERERMS 737
Score = 47.4 bits (111), Expect(5) = 1e-35
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIYGRS-KLKL 512
+IMY + YTRPD + S E H V+NI KYL TKD +YG S +L +
Sbjct: 747 SIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVV 806
Query: 511 DGLTDSSF 488
G TD+SF
Sbjct: 807 SGYTDASF 814
Score = 40.0 bits (92), Expect(5) = 1e-35
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+DD +S LNGGAV+ K KQ VA + YIA +EAA
Sbjct: 814 FQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAA 862
Score = 31.2 bits (69), Expect(5) = 1e-35
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 22/64 (34%)
Frame = -2
Query: 323 KFISELGIVL----------------------KSHLGSKHVLWDFHLIIGIIDRWEITIE 210
KFI+ELG+V KSH SKH+ +HLI IIDR ++ I
Sbjct: 870 KFITELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKIS 929
Query: 209 IVDS 198
V +
Sbjct: 930 RVST 933
Score = 26.9 bits (58), Expect(5) = 1e-35
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDE 1046
GLKQAS+ WN+ F+E
Sbjct: 593 GLKQASRSWNLRFNE 607
>AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] ABA93176.1 retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 938
Score = 94.4 bits (233), Expect(4) = 1e-34
Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F+ N EP VYK++SGS + L+LY+D IL I N++PMLESVK L S DLG
Sbjct: 682 KALGFVKNEQEPCVYKKISGSALVFLILYVDDILLIENDIPMLESVKTSLKNSFSMKDLG 741
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ +LGI+IY DR R++ L+Q TYI +LK F+M++SK+
Sbjct: 742 EAAYILGIRIYKDRSKRLIGLSQSTYIDKVLKRFNMQDSKK 782
Score = 48.9 bits (115), Expect(4) = 1e-34
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 10/68 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIY-GRSKLKL 512
+IMY + TRPD ++ S E H +KNILKYL TKD+ +Y G+ +L +
Sbjct: 819 SIMYAMLCTRPDVSYALSATSQYQSDPGESHWIALKNILKYLRRTKDMFLVYGGQEELVV 878
Query: 511 DGLTDSSF 488
+G TD+SF
Sbjct: 879 NGYTDASF 886
Score = 42.7 bits (99), Expect(4) = 1e-34
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQID+DD +S + LNGGAV+ K KQ VA + YIA +EAA
Sbjct: 886 FQIDKDDFRSQSGFVFYLNGGAVSWKSSKQDTVADSTTEAEYIAASEAA 934
Score = 31.2 bits (69), Expect(4) = 1e-34
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDE 1046
GLKQAS+ WNI+FDE
Sbjct: 665 GLKQASRSWNIHFDE 679
>AAV85747.1 Integrase core domain, putative [Oryza sativa Japonica Group]
AAX92956.1 retrotransposon protein, putative, Ty1-copia
sub-class [Oryza sativa Japonica Group] ABA92827.2
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1184
Score = 90.5 bits (223), Expect(5) = 2e-34
Identities = 49/101 (48%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F+ N EP VYK++SGS + L+LY+D IL I N++ MLESVK L S DLG
Sbjct: 834 KALGFVRNEEEPCVYKKISGSALVFLILYVDDILLIGNDISMLESVKTSLKNSFSMKDLG 893
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ +LGI+IY DR R++ L+Q TYI +LK F+M++SK+
Sbjct: 894 EAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKK 934
Score = 48.5 bits (114), Expect(5) = 2e-34
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIY-GRSKLKL 512
+IMY + TRPD ++ S E H VKNILKYL TKD+ Y G+ +L +
Sbjct: 971 SIMYAMLCTRPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLAYGGQEELVV 1030
Query: 511 DGLTDSSF 488
+G TD+SF
Sbjct: 1031 NGYTDASF 1038
Score = 38.5 bits (88), Expect(5) = 2e-34
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEA 346
FQID+DD +S + LNGGAV+ K KQ V + YIA +EA
Sbjct: 1038 FQIDKDDFRSQSGFVFCLNGGAVSWKSSKQDIVVDSTTEAEYIAASEA 1085
Score = 29.6 bits (65), Expect(5) = 2e-34
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDE 1046
GLKQAS+ WNI FDE
Sbjct: 817 GLKQASRSWNIRFDE 831
Score = 28.9 bits (63), Expect(5) = 2e-34
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 22/60 (36%)
Frame = -2
Query: 326 EKFISELGIVL----------------------KSHLGSKHVLWDFHLIIGIIDRWEITI 213
+KF+S+LG++ +SH SKH+L +HLI I+ R ++ I
Sbjct: 1089 KKFVSQLGVMTSASSSMDLYCDNSGAIAQAKEPRSHQKSKHILRQYHLIREIVGRGDVKI 1148
>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 92.8 bits (229), Expect(5) = 3e-34
Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F+ N EP VYK++SGS + L+LY+D IL I N++PMLESVK L S DLG
Sbjct: 912 KALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLG 971
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ +LGI+IY DR R++ L+Q TYI +LK F+M++SK+
Sbjct: 972 EAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKK 1012
Score = 47.8 bits (112), Expect(5) = 3e-34
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIYGR-SKLKL 512
+IMY + TR D ++ S E H VKNILKYL TKD+ +YGR +L +
Sbjct: 1049 SIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVV 1108
Query: 511 DGLTDSSF 488
+G TD+SF
Sbjct: 1109 NGYTDASF 1116
Score = 40.4 bits (93), Expect(5) = 3e-34
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+DD +S + LNGGAV+ K KQ VA + YIA +EAA
Sbjct: 1116 FQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAA 1164
Score = 27.3 bits (59), Expect(5) = 3e-34
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 1087 LKQASQKWNIYFDE 1046
LKQAS+ WNI FDE
Sbjct: 896 LKQASRSWNIRFDE 909
Score = 26.9 bits (58), Expect(5) = 3e-34
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 22/60 (36%)
Frame = -2
Query: 326 EKFISELGIVL----------------------KSHLGSKHVLWDFHLIIGIIDRWEITI 213
+KF+S+LG++ +SH SKH+L +HLI ++ R ++ I
Sbjct: 1171 KKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREMVGRGDVKI 1230
>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 92.8 bits (229), Expect(5) = 3e-34
Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F+ N EP VYK++SGS + L+LY+D IL I N++PMLESVK L S DLG
Sbjct: 825 KALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLG 884
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ +LGI+IY DR R++ L+Q TYI +LK F+M++SK+
Sbjct: 885 EAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKK 925
Score = 47.8 bits (112), Expect(5) = 3e-34
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIYGR-SKLKL 512
+IMY + TR D ++ S E H VKNILKYL TKD+ +YGR +L +
Sbjct: 962 SIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVV 1021
Query: 511 DGLTDSSF 488
+G TD+SF
Sbjct: 1022 NGYTDASF 1029
Score = 40.4 bits (93), Expect(5) = 3e-34
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+DD +S + LNGGAV+ K KQ VA + YIA +EAA
Sbjct: 1029 FQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAA 1077
Score = 27.3 bits (59), Expect(5) = 3e-34
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 1087 LKQASQKWNIYFDE 1046
LKQAS+ WNI FDE
Sbjct: 809 LKQASRSWNIRFDE 822
Score = 26.9 bits (58), Expect(5) = 3e-34
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 22/60 (36%)
Frame = -2
Query: 326 EKFISELGIVL----------------------KSHLGSKHVLWDFHLIIGIIDRWEITI 213
+KF+S+LG++ +SH SKH+L +HLI ++ R ++ I
Sbjct: 1084 KKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREMVGRGDVKI 1143
>KYP76577.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 368
Score = 97.4 bits (241), Expect(4) = 9e-33
Identities = 54/101 (53%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K+FDF+ EP VYKRVSGS + L+LY+D IL I N++P L+S KI LS+ S DLG
Sbjct: 59 KKFDFVRCEEEPCVYKRVSGSTIIFLMLYVDDILLIGNDIPFLQSTKIWLSEQFSMKDLG 118
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ +LGI+IY DR RML L+Q YI +L+ ++MENSKR
Sbjct: 119 EAAYILGIKIYRDRSKRMLGLSQSMYIDTILRRYNMENSKR 159
Score = 50.4 bits (119), Expect(4) = 9e-33
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 9/67 (13%)
Frame = -3
Query: 658 IMYILKYTRPDADWS---YSR------EDHCKTVKNILKYLTGTKDVIKIYGRSKLKLDG 506
IMYI+ TRPD ++ SR E++ K VK ILKYL T+D IYG ++L L G
Sbjct: 197 IMYIMTCTRPDVAFAPGVVSRYQANPGEENWKVVKTILKYLRRTQDQFLIYGGTELMLKG 256
Query: 505 LTDSSFS 485
TD+SF+
Sbjct: 257 YTDASFA 263
Score = 34.7 bits (78), Expect(4) = 9e-33
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEA 346
F D+DD KS + L GGAV+ K KQ VA + YIA ++A
Sbjct: 262 FASDKDDSKSISGYVFTLYGGAVSWKSSKQATVADSTTEAEYIAASDA 309
Score = 28.5 bits (62), Expect(4) = 9e-33
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = -3
Query: 1123 DEVRVVDTQRN--GLKQASQKWNIYFDETNQK 1034
D +V +R+ GLK+AS+ WNI F++T +K
Sbjct: 29 DHHKVCKLERSIYGLKKASRSWNIQFNKTIKK 60
>ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 88.6 bits (218), Expect(4) = 3e-30
Identities = 47/101 (46%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F+ N P VYK++SGS + L+LY+D IL I N++PMLESV I L S DLG
Sbjct: 886 KALGFVKNEEVPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVNISLKNSFSMKDLG 945
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ +LGI+IY D R++ L++ TYI +LK+F+M++SK+
Sbjct: 946 EAAYILGIRIYRDGSKRLIGLSESTYIDKVLKMFNMQDSKK 986
Score = 48.9 bits (115), Expect(4) = 3e-30
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIY-GRSKLKL 512
+IMY + TRPD + S E H VKNILKYL TKD+ +Y G+ +L +
Sbjct: 1023 SIMYAMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYGGQEELVV 1082
Query: 511 DGLTDSSF 488
+G TD+SF
Sbjct: 1083 NGYTDASF 1090
Score = 35.4 bits (80), Expect(4) = 3e-30
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+DD +S + LNG AV+ K KQ A + YIA ++AA
Sbjct: 1090 FQTDKDDFRSQSGFVFCLNGSAVSWKSSKQDTAANSTTEAEYIAASKAA 1138
Score = 29.6 bits (65), Expect(4) = 3e-30
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDE 1046
GLKQAS+ WNI FDE
Sbjct: 869 GLKQASRSWNIRFDE 883
>AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 88.6 bits (218), Expect(4) = 3e-30
Identities = 47/101 (46%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F+ N P VYK++SGS + L+LY+D IL I N++PMLESV I L S DLG
Sbjct: 828 KALGFVKNEEVPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVNISLKNSFSMKDLG 887
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ +LGI+IY D R++ L++ TYI +LK+F+M++SK+
Sbjct: 888 EAAYILGIRIYRDGSKRLIGLSESTYIDKVLKMFNMQDSKK 928
Score = 48.9 bits (115), Expect(4) = 3e-30
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIY-GRSKLKL 512
+IMY + TRPD + S E H VKNILKYL TKD+ +Y G+ +L +
Sbjct: 965 SIMYAMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYGGQEELVV 1024
Query: 511 DGLTDSSF 488
+G TD+SF
Sbjct: 1025 NGYTDASF 1032
Score = 35.4 bits (80), Expect(4) = 3e-30
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+DD +S + LNG AV+ K KQ A + YIA ++AA
Sbjct: 1032 FQTDKDDFRSQSGFVFCLNGSAVSWKSSKQDTAANSTTEAEYIAASKAA 1080
Score = 29.6 bits (65), Expect(4) = 3e-30
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDE 1046
GLKQAS+ WNI FDE
Sbjct: 811 GLKQASRSWNIRFDE 825
>GAU49783.1 hypothetical protein TSUD_369070 [Trifolium subterraneum]
Length = 1744
Score = 92.4 bits (228), Expect(4) = 3e-28
Identities = 57/128 (44%), Positives = 78/128 (60%), Gaps = 3/128 (2%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYI-DILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K+F FI N EP V+K+VSGS+V LVLY+ D+L + NN+P L+ VK +L K S DLG
Sbjct: 320 KQFGFIKNEDEPCVFKKVSGSIVVFLVLYVDDMLLMGNNIPTLQQVKTRLGKCFSMKDLG 379
Query: 860 RISLL-GIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR-CXXXXXXXXXXXXXSP*T 687
+ + GI+IY DR ++L L+Q YI +L+ FSM SK+ SP T
Sbjct: 380 EAAYIQGIRIYRDRSQKLLGLSQSKYIDKVLRRFSMHESKKGFIPMQHGLCLSKTQSPLT 439
Query: 686 PEKRDRMS 663
E+RDRM+
Sbjct: 440 KEERDRMN 447
Score = 40.0 bits (92), Expect(4) = 3e-28
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = -3
Query: 658 IMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIY-GRSKLKLD 509
IMY + TRPD ++ S + H VKNILKYL TK+ IY G+ L +
Sbjct: 458 IMYAMLCTRPDVSYALSATSRYQSNPGDPHWVAVKNILKYLRRTKNSFLIYGGQEGLAVI 517
Query: 508 GLTDSSF 488
G T +SF
Sbjct: 518 GYTYASF 524
Score = 32.0 bits (71), Expect(4) = 3e-28
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVI 376
FQ D+DD KS + LNGG V+ K KQ+ VA VI
Sbjct: 524 FQTDKDDFKSQYGYVFCLNGGDVSWKSSKQETVADHVI 561
Score = 30.8 bits (68), Expect(4) = 3e-28
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDET 1043
GLKQAS+ WN+ FDET
Sbjct: 303 GLKQASRSWNLRFDET 318
>ABA97342.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 70.9 bits (172), Expect(5) = 1e-27
Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Frame = -2
Query: 962 LVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLGRIS-LLGIQIYIDRFNRMLDLTQGT 789
LVLY+D IL I N++PMLESVK L S DLG + +LGI+IY DR R++ L+Q T
Sbjct: 722 LVLYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 781
Query: 788 YIHLMLKLFSMENSKR 741
YI +LK F+M++SK+
Sbjct: 782 YIDKVLKRFNMQDSKK 797
Score = 47.4 bits (111), Expect(5) = 1e-27
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIY-GRSKLKL 512
+IMY + T PD ++ S E H VKNILKYL TKD+ +Y G+ +L +
Sbjct: 834 SIMYAMLCTHPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELVV 893
Query: 511 DGLTDSSF 488
G TD+SF
Sbjct: 894 KGYTDASF 901
Score = 40.0 bits (92), Expect(5) = 1e-27
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+DD +S + LNGGAV+ K KQ V + + YIA +EAA
Sbjct: 901 FQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVVDSITEAEYIAASEAA 949
Score = 32.0 bits (71), Expect(5) = 1e-27
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDETNQKSLILSQIRVNLV 998
GLKQAS+ WNI FDE K+ LS+ + +LV
Sbjct: 694 GLKQASRSWNIRFDEV-VKAWALSKTKKSLV 723
Score = 22.7 bits (47), Expect(5) = 1e-27
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 22/60 (36%)
Frame = -2
Query: 326 EKFISELGIVL----------------------KSHLGSKHVLWDFHLIIGIIDRWEITI 213
+KF+S+LG++ +SH S ++LW +HLI I+ R + I
Sbjct: 956 KKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHQKS-NILWRYHLIREIVGRGVVKI 1014
>CAN69397.1 hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 77.4 bits (189), Expect(5) = 2e-27
Identities = 47/101 (46%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K + F N EP VYK++ G V LVLY+D IL I N++ L VK L+ DLG
Sbjct: 313 KSYGFEQNLGEPCVYKQIGGDKVVFLVLYVDDILLIGNDVESLSKVKNWLASQFQMKDLG 372
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
S +LGIQ+ DR NR+L L+Q YI +L F+MENSK+
Sbjct: 373 EASYILGIQMTRDRKNRLLALSQAAYIDKVLVKFAMENSKK 413
Score = 39.3 bits (90), Expect(5) = 2e-27
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSY---SRE------DHCKTVKNILKYLTGTKDVIKIYGRSKLKLD 509
++MY + TRPD ++ SR DH VK+ILKYL T++ + +Y +L
Sbjct: 450 SLMYAMLCTRPDICFAVGVVSRYQSNPGLDHWVAVKHILKYLRRTRNYMLVYSGRELIPI 509
Query: 508 GLTDSSF-SDRPRR 470
G TDS F SDR R
Sbjct: 510 GYTDSDFQSDRDSR 523
Score = 38.9 bits (89), Expect(5) = 2e-27
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+D RKST + L GGA+ + KQ VA ++ Y+A EAA
Sbjct: 516 FQSDRDSRKSTSEAVFTLGGGAIIWRSVKQTCVADSTMEAEYVAACEAA 564
Score = 29.6 bits (65), Expect(5) = 2e-27
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = -3
Query: 1120 EVRVVDTQRN--GLKQASQKWNIYFDE 1046
E +V QR+ GLKQAS+ WNI F+E
Sbjct: 284 EQKVCKLQRSIYGLKQASRSWNIIFNE 310
Score = 26.9 bits (58), Expect(5) = 2e-27
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -2
Query: 293 KSHLGSKHVLWDFHLIIGIIDRWEITIEIVDS 198
++H KH+ FHL+ I+ R ++++E + S
Sbjct: 604 RNHRKGKHIERKFHLVREIVSRGDVSVEKIAS 635
>CAD39797.2 OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 89.7 bits (221), Expect(3) = 3e-26
Identities = 49/101 (48%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F N EP VYK++SGS + L+LY+D IL I N++P+LESVK L S DLG
Sbjct: 685 KVLGFFKNEQEPCVYKKISGSALVFLILYVDDILLIGNDIPILESVKTLLKNSFSMKDLG 744
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ +LGI+IY DR R++ L+Q TYI +LK F+M++SK+
Sbjct: 745 EAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKK 785
Score = 46.6 bits (109), Expect(3) = 3e-26
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIY-GRSKLKL 512
+IMY + T PD ++ S E H VKNILKYL T+D+ +Y G+ +L +
Sbjct: 822 SIMYAMLCTCPDVSYALSATNRYQSDPGESHWIAVKNILKYLRRTEDMFLVYGGQEELVV 881
Query: 511 DGLTDSSF----SDRPRR*KINFKVNG*LERWCS 422
+G TD+SF D R F +NG + W S
Sbjct: 882 NGYTDASFQTDKDDFRSRSGFVFCLNGGVVSWKS 915
Score = 32.7 bits (73), Expect(3) = 3e-26
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3
Query: 1135 PVTYDEVRVVDTQRNGLKQASQKWNIYFDE 1046
P TY+E +GLKQAS+ WNI FDE
Sbjct: 656 PTTYEEAM---KSIHGLKQASRSWNIRFDE 682
>AMY96445.1 gag/pol protein [Momordica dioica]
Length = 1313
Score = 83.6 bits (205), Expect(4) = 3e-26
Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYI-DILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F FI N E VYK++SGSVV L+LY+ DIL I N++ LE VK L+ S DLG
Sbjct: 989 KAFGFIQNVDESCVYKKISGSVVAFLILYVDDILLIGNDVEYLEDVKKWLNTSFSMKDLG 1048
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+LGI+IY DR N+ + ++Q TYI +L F M++SK+
Sbjct: 1049 EAQYILGIRIYRDRSNKTIGMSQSTYIDKVLSRFKMQDSKK 1089
Score = 50.4 bits (119), Expect(4) = 3e-26
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYS---------REDHCKTVKNILKYLTGTKDVIKIYGRSK-LKL 512
++MY + TRPD ++ S DH VKNILKYL T+++ +YG K L +
Sbjct: 1126 SLMYAMLCTRPDVCYALSIVSRYQSNPGRDHWTAVKNILKYLRRTRNMFLVYGGDKDLAV 1185
Query: 511 DGLTDSSF---SDRPRR*KINFKVNG*LERWCSELERFQTAKSCWFSDKDKLYSCK*SCK 341
G TDSSF D + F +NG W S + +C + + + +C+ + K
Sbjct: 1186 KGYTDSSFQTDKDDSKSQSGVFTLNGGAVSWRSSKQTCVADSTC---EAEYVAACE-AAK 1241
Query: 340 LIVWMK 323
VW++
Sbjct: 1242 EAVWIR 1247
Score = 29.6 bits (65), Expect(4) = 3e-26
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDE 1046
GLKQAS+ WNI FDE
Sbjct: 972 GLKQASRSWNIRFDE 986
Score = 25.0 bits (53), Expect(4) = 3e-26
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 293 KSHLGSKHVLWDFHLIIGIIDRWEITI 213
+SH KH+ +HLI I++R ++ +
Sbjct: 1280 RSHKRGKHIERKYHLIREIVERGDVVV 1306
>ABF97078.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 649
Score = 93.2 bits (230), Expect(4) = 1e-25
Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F+ N EP VYK++SGS + L+LY+D IL I N++PMLESVK L S DLG
Sbjct: 340 KVLGFVKNEEEPCVYKKISGSTLVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLG 399
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ +LGI+IY DR R++ L+Q TYI +LK F+M++SK+
Sbjct: 400 EAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKK 440
Score = 45.4 bits (106), Expect(4) = 1e-25
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 13/71 (18%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR------------EDHCKTVKNILKYLTGTKDVIKIY-GRSK 521
+I+Y + TRPD ++ S E H VKNILKYL TKD+ +Y G+ +
Sbjct: 477 SIVYGMLCTRPDVSYALSATSRYQGYVPSPGESHWIVVKNILKYLRRTKDMFLVYGGQEE 536
Query: 520 LKLDGLTDSSF 488
+ ++G TD+SF
Sbjct: 537 IVVNGYTDASF 547
Score = 27.3 bits (59), Expect(4) = 1e-25
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDE 1046
GLKQAS+ W I FDE
Sbjct: 323 GLKQASRSWKICFDE 337
Score = 20.8 bits (42), Expect(4) = 1e-25
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGA 424
FQ D+DD + + LNGGA
Sbjct: 547 FQTDKDDFRLQFGFVFCLNGGA 568
>AAK52163.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 637
Score = 93.2 bits (230), Expect(4) = 1e-25
Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F+ N EP VYK++SGS + L+LY+D IL I N++PMLESVK L S DLG
Sbjct: 328 KVLGFVKNEEEPCVYKKISGSTLVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLG 387
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ +LGI+IY DR R++ L+Q TYI +LK F+M++SK+
Sbjct: 388 EAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKK 428
Score = 45.4 bits (106), Expect(4) = 1e-25
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 13/71 (18%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR------------EDHCKTVKNILKYLTGTKDVIKIY-GRSK 521
+I+Y + TRPD ++ S E H VKNILKYL TKD+ +Y G+ +
Sbjct: 465 SIVYGMLCTRPDVSYALSATSRYQGYVPSPGESHWIVVKNILKYLRRTKDMFLVYGGQEE 524
Query: 520 LKLDGLTDSSF 488
+ ++G TD+SF
Sbjct: 525 IVVNGYTDASF 535
Score = 27.3 bits (59), Expect(4) = 1e-25
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDE 1046
GLKQAS+ W I FDE
Sbjct: 311 GLKQASRSWKICFDE 325
Score = 20.8 bits (42), Expect(4) = 1e-25
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGA 424
FQ D+DD + + LNGGA
Sbjct: 535 FQTDKDDFRLQFGFVFCLNGGA 556
>ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 92.8 bits (229), Expect(3) = 2e-25
Identities = 49/101 (48%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Frame = -2
Query: 1037 KEFDFITN*SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLG 861
K F+ N EP VYK++SGS + L+LY+D IL I N++PMLESVK L S DLG
Sbjct: 1427 KALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLG 1486
Query: 860 RIS-LLGIQIYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ ++GI+IY DR R++ L+Q TYI +LK F+M++SK+
Sbjct: 1487 EAAYIMGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKK 1527
Score = 43.9 bits (102), Expect(3) = 2e-25
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIY-GRSKLKL 512
+IMY + TR D ++ S E H VKNILKYL TKD+ +Y G+ +L +
Sbjct: 1564 SIMYAMLCTRIDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELVV 1623
Query: 511 DGLTDSSF 488
+G D+SF
Sbjct: 1624 NGYIDASF 1631
Score = 29.6 bits (65), Expect(3) = 2e-25
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDE 1046
GLKQAS+ WNI FDE
Sbjct: 1410 GLKQASRSWNIRFDE 1424
>XP_017233167.1 PREDICTED: uncharacterized protein LOC108207215, partial [Daucus
carota subsp. sativus]
Length = 3860
Score = 72.0 bits (175), Expect(5) = 8e-25
Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = -2
Query: 1010 SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLGRIS-LLGIQ 837
SE VYKR G+ V LVLY+D IL I NN+ ML S+K L K DLG + +LGI+
Sbjct: 1124 SEACVYKRCEGNAVVFLVLYVDDILLIGNNVKMLSSIKAWLFKQFEMKDLGEAAYILGIK 1183
Query: 836 IYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ DR RML L+Q YI +L F+M++SK+
Sbjct: 1184 LIRDRKKRMLALSQEPYIDDVLARFNMQDSKK 1215
Score = 72.0 bits (175), Expect(5) = 8e-25
Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = -2
Query: 1010 SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLGRIS-LLGIQ 837
SE VYKR G+ V LVLY+D IL I NN+ ML S+K L K DLG + +LGI+
Sbjct: 2339 SEACVYKRCEGNAVVFLVLYVDDILLIGNNVKMLSSIKAWLFKQFEMKDLGEAAYILGIK 2398
Query: 836 IYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ DR RML L+Q YI +L F+M++SK+
Sbjct: 2399 LIRDRKKRMLALSQEPYIDDVLARFNMQDSKK 2430
Score = 72.0 bits (175), Expect(5) = 8e-25
Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = -2
Query: 1010 SEPSVYKRVSGSVVTLLVLYID-ILRIRNNMPMLESVKIKLSKHSSTNDLGRIS-LLGIQ 837
SE VYKR G+ V LVLY+D IL I NN+ ML S+K L K DLG + +LGI+
Sbjct: 3554 SEACVYKRCEGNAVVFLVLYVDDILLIGNNVKMLSSIKAWLFKQFEMKDLGEAAYILGIK 3613
Query: 836 IYIDRFNRMLDLTQGTYIHLMLKLFSMENSKR 741
+ DR RML L+Q YI +L F+M++SK+
Sbjct: 3614 LIRDRKKRMLALSQEPYIDDVLARFNMQDSKK 3645
Score = 40.4 bits (93), Expect(5) = 8e-25
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIYGRSKLKLD 509
++MY + TRPD ++ ++H VK ILKYL TK+ + +Y S L
Sbjct: 1252 SLMYAMLCTRPDICFAVGMVSRYQSNPGQEHWSAVKAILKYLRRTKEYMLVYKSSDLVPL 1311
Query: 508 GLTDSSF-SDRPRR 470
G TDS F +D+ +R
Sbjct: 1312 GYTDSDFQTDKDKR 1325
Score = 40.4 bits (93), Expect(5) = 8e-25
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+D RKST + L GGAV + KQ+ +A ++ Y+A +EAA
Sbjct: 1318 FQTDKDKRKSTSGCVFTLGGGAVIWRSVKQKCIADSTMEAEYVAASEAA 1366
Score = 40.4 bits (93), Expect(5) = 8e-25
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIYGRSKLKLD 509
++MY + TRPD ++ ++H VK ILKYL TK+ + +Y S L
Sbjct: 2467 SLMYAMLCTRPDICFAVGMVSRYQSNPGQEHWSAVKAILKYLRRTKEYMLVYKSSDLVPL 2526
Query: 508 GLTDSSF-SDRPRR 470
G TDS F +D+ +R
Sbjct: 2527 GYTDSDFQTDKDKR 2540
Score = 40.4 bits (93), Expect(5) = 8e-25
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+D RKST + L GGAV + KQ+ +A ++ Y+A +EAA
Sbjct: 2533 FQTDKDKRKSTSGCVFTLGGGAVIWRSVKQKCIADSTMEAEYVAASEAA 2581
Score = 40.4 bits (93), Expect(5) = 8e-25
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Frame = -3
Query: 661 TIMYILKYTRPDADWSYSR---------EDHCKTVKNILKYLTGTKDVIKIYGRSKLKLD 509
++MY + TRPD ++ ++H VK ILKYL TK+ + +Y S L
Sbjct: 3682 SLMYAMLCTRPDICFAVGMVSRYQSNPGQEHWSAVKAILKYLRRTKEYMLVYKSSDLVPL 3741
Query: 508 GLTDSSF-SDRPRR 470
G TDS F +D+ +R
Sbjct: 3742 GYTDSDFQTDKDKR 3755
Score = 40.4 bits (93), Expect(5) = 8e-25
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = -1
Query: 489 FQIDQDDRKSTLR*MVNLNGGAVN*KGFKQQRVAGLVIKTNYIAVNEAA 343
FQ D+D RKST + L GGAV + KQ+ +A ++ Y+A +EAA
Sbjct: 3748 FQTDKDKRKSTSGCVFTLGGGAVIWRSVKQKCIADSTMEAEYVAASEAA 3796
Score = 28.5 bits (62), Expect(5) = 8e-25
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDETNQ 1037
GLKQAS+ WNI FD+ Q
Sbjct: 1098 GLKQASRYWNIRFDQAVQ 1115
Score = 28.5 bits (62), Expect(5) = 8e-25
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDETNQ 1037
GLKQAS+ WNI FD+ Q
Sbjct: 2313 GLKQASRYWNIRFDQAVQ 2330
Score = 28.5 bits (62), Expect(5) = 8e-25
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 1090 GLKQASQKWNIYFDETNQ 1037
GLKQAS+ WNI FD+ Q
Sbjct: 3528 GLKQASRYWNIRFDQAVQ 3545
Score = 21.6 bits (44), Expect(5) = 8e-25
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 293 KSHLGSKHVLWDFHLIIGIIDRWEI 219
++H +KH+ +HLI + R +I
Sbjct: 1406 RAHKAAKHIERKYHLIRQFVKRGDI 1430
Score = 21.6 bits (44), Expect(5) = 8e-25
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 293 KSHLGSKHVLWDFHLIIGIIDRWEI 219
++H +KH+ +HLI + R +I
Sbjct: 2621 RAHKAAKHIERKYHLIRQFVKRGDI 2645
Score = 21.6 bits (44), Expect(5) = 8e-25
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 293 KSHLGSKHVLWDFHLIIGIIDRWEI 219
++H +KH+ +HLI + R +I
Sbjct: 3836 RAHKAAKHIERKYHLIRQFVKRGDI 3860