BLASTX nr result
ID: Panax25_contig00043463
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00043463
(396 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CDP02312.1 unnamed protein product [Coffea canephora] 80 5e-15
XP_015064527.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 76 2e-13
XP_006338371.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 76 2e-13
XP_004232168.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 76 2e-13
XP_016539893.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 75 2e-13
XP_019224624.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 74 6e-13
XP_016464045.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 74 6e-13
XP_015068073.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 74 6e-13
XP_009790312.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 74 6e-13
XP_009600635.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 74 6e-13
XP_006359638.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 74 6e-13
XP_016561311.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 74 8e-13
XP_006850754.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 74 1e-12
XP_002306071.1 hypothetical protein POPTR_0004s11880g [Populus t... 69 2e-12
XP_012075022.1 PREDICTED: ribosome biogenesis protein WDR12-like... 72 2e-12
XP_017237341.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 73 2e-12
AFK40457.1 unknown [Medicago truncatula] 66 3e-12
XP_010258084.1 PREDICTED: ribosome biogenesis protein WDR12 homo... 72 4e-12
ONK75806.1 uncharacterized protein A4U43_C03F20740 [Asparagus of... 69 4e-12
KHN25575.1 Ribosome biogenesis protein wdr12 [Glycine soja] 68 5e-12
>CDP02312.1 unnamed protein product [Coffea canephora]
Length = 436
Score = 80.1 bits (196), Expect = 5e-15
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVIDSH+DKVLCADWWKSNCV+SGG DSKLCISSEI V+
Sbjct: 397 LAVIDSHEDKVLCADWWKSNCVISGGADSKLCISSEISVM 436
>XP_015064527.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Solanum
pennellii] XP_015064528.1 PREDICTED: ribosome biogenesis
protein WDR12 homolog [Solanum pennellii] XP_015064529.1
PREDICTED: ribosome biogenesis protein WDR12 homolog
[Solanum pennellii] XP_015064530.1 PREDICTED: ribosome
biogenesis protein WDR12 homolog [Solanum pennellii]
Length = 440
Score = 75.9 bits (185), Expect = 2e-13
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVID+HKDKVLCADWWK V+SGG DSKLCISS++CVL
Sbjct: 401 LAVIDTHKDKVLCADWWKGESVISGGADSKLCISSDVCVL 440
>XP_006338371.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Solanum
tuberosum] XP_006338372.1 PREDICTED: ribosome biogenesis
protein WDR12 homolog [Solanum tuberosum]
Length = 440
Score = 75.9 bits (185), Expect = 2e-13
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVID+HKDKVLCADWWK V+SGG DSKLCISS++CVL
Sbjct: 401 LAVIDTHKDKVLCADWWKGESVISGGADSKLCISSDVCVL 440
>XP_004232168.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Solanum
lycopersicum] XP_010316221.1 PREDICTED: ribosome
biogenesis protein WDR12 homolog [Solanum lycopersicum]
Length = 441
Score = 75.9 bits (185), Expect = 2e-13
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVID+HKDKVLCADWWK V+SGG DSKLCISS++CVL
Sbjct: 402 LAVIDTHKDKVLCADWWKGESVISGGADSKLCISSDVCVL 441
>XP_016539893.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Capsicum
annuum]
Length = 440
Score = 75.5 bits (184), Expect = 2e-13
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVID+HKDKVLCADWWKS V+SGG DS LCISS++CVL
Sbjct: 401 LAVIDTHKDKVLCADWWKSESVISGGADSNLCISSDVCVL 440
>XP_019224624.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Nicotiana
attenuata] XP_019224628.1 PREDICTED: ribosome biogenesis
protein WDR12 homolog [Nicotiana attenuata]
XP_019224634.1 PREDICTED: ribosome biogenesis protein
WDR12 homolog [Nicotiana attenuata] OIT05831.1 ribosome
biogenesis protein wdr12-like protein [Nicotiana
attenuata]
Length = 440
Score = 74.3 bits (181), Expect = 6e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVID+H DKVLCADWWK VVSGG DSKLCISS++CVL
Sbjct: 401 LAVIDTHNDKVLCADWWKGESVVSGGADSKLCISSDVCVL 440
>XP_016464045.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Nicotiana
tabacum] XP_016464046.1 PREDICTED: ribosome biogenesis
protein WDR12 homolog [Nicotiana tabacum]
Length = 440
Score = 74.3 bits (181), Expect = 6e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVID+H DKVLCADWWK VVSGG DSKLCISS++CVL
Sbjct: 401 LAVIDTHNDKVLCADWWKGESVVSGGADSKLCISSDVCVL 440
>XP_015068073.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Solanum
pennellii]
Length = 440
Score = 74.3 bits (181), Expect = 6e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVID+H DKVLCADWWK VVSGG DSKLCISS++CVL
Sbjct: 401 LAVIDTHNDKVLCADWWKGESVVSGGADSKLCISSDVCVL 440
>XP_009790312.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Nicotiana
sylvestris]
Length = 440
Score = 74.3 bits (181), Expect = 6e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVID+H DKVLCADWWK VVSGG DSKLCISS++CVL
Sbjct: 401 LAVIDTHNDKVLCADWWKGESVVSGGADSKLCISSDVCVL 440
>XP_009600635.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Nicotiana
tomentosiformis] XP_009600636.1 PREDICTED: ribosome
biogenesis protein WDR12 homolog [Nicotiana
tomentosiformis] XP_018626265.1 PREDICTED: ribosome
biogenesis protein WDR12 homolog [Nicotiana
tomentosiformis]
Length = 440
Score = 74.3 bits (181), Expect = 6e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVID+H DKVLCADWWK VVSGG DSKLCISS++CVL
Sbjct: 401 LAVIDTHNDKVLCADWWKGESVVSGGADSKLCISSDVCVL 440
>XP_006359638.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Solanum
tuberosum] XP_006359639.1 PREDICTED: ribosome biogenesis
protein WDR12 homolog [Solanum tuberosum]
Length = 440
Score = 74.3 bits (181), Expect = 6e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVID+H DKVLCADWWK VVSGG DSKLCISS++CVL
Sbjct: 401 LAVIDTHNDKVLCADWWKGESVVSGGADSKLCISSDVCVL 440
>XP_016561311.1 PREDICTED: ribosome biogenesis protein WDR12 homolog isoform X1
[Capsicum annuum] XP_016561312.1 PREDICTED: ribosome
biogenesis protein WDR12 homolog isoform X1 [Capsicum
annuum]
Length = 440
Score = 73.9 bits (180), Expect = 8e-13
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVID+H DKVLCADWWK V+SGG DSKLCISS++CVL
Sbjct: 401 LAVIDTHNDKVLCADWWKGKSVISGGADSKLCISSDVCVL 440
>XP_006850754.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Amborella
trichopoda] XP_011625683.1 PREDICTED: ribosome
biogenesis protein WDR12 homolog [Amborella trichopoda]
XP_011625684.1 PREDICTED: ribosome biogenesis protein
WDR12 homolog [Amborella trichopoda] XP_011625685.1
PREDICTED: ribosome biogenesis protein WDR12 homolog
[Amborella trichopoda] XP_011625686.1 PREDICTED:
ribosome biogenesis protein WDR12 homolog [Amborella
trichopoda] ERN12335.1 hypothetical protein
AMTR_s00025p00071700 [Amborella trichopoda]
Length = 434
Score = 73.6 bits (179), Expect = 1e-12
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICV 117
LAVIDSHKDKVLCADWW + V+SGG D KLCISSEIC+
Sbjct: 395 LAVIDSHKDKVLCADWWNGDSVISGGADGKLCISSEICI 433
>XP_002306071.1 hypothetical protein POPTR_0004s11880g [Populus trichocarpa]
EEE86582.1 hypothetical protein POPTR_0004s11880g
[Populus trichocarpa]
Length = 118
Score = 68.9 bits (167), Expect = 2e-12
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICV 117
L +IDSH+DKVLCADWWK + V+SGGVDSKLCISS I V
Sbjct: 79 LVIIDSHEDKVLCADWWKGDSVISGGVDSKLCISSGISV 117
>XP_012075022.1 PREDICTED: ribosome biogenesis protein WDR12-like, partial
[Jatropha curcas]
Length = 259
Score = 71.6 bits (174), Expect = 2e-12
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICVL 120
LAVI+SH+DKVLCADWWKS+ V+SGGVD KLCISS+I +L
Sbjct: 220 LAVIESHEDKVLCADWWKSDSVISGGVDCKLCISSDISIL 259
>XP_017237341.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Daucus carota
subsp. sativus] XP_017237342.1 PREDICTED: ribosome
biogenesis protein WDR12 homolog [Daucus carota subsp.
sativus] KZN02288.1 hypothetical protein DCAR_011042
[Daucus carota subsp. sativus]
Length = 444
Score = 72.8 bits (177), Expect = 2e-12
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICV 117
LAVIDSH+DKVLCADWWK +CVVSGGVDSKL +SSEI V
Sbjct: 405 LAVIDSHEDKVLCADWWKGDCVVSGGVDSKLRVSSEISV 443
>AFK40457.1 unknown [Medicago truncatula]
Length = 50
Score = 66.2 bits (160), Expect = 3e-12
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEI 111
L+ I+SH DKVLCADWWKS V+SGG DSKLCISS+I
Sbjct: 11 LSTIESHSDKVLCADWWKSGSVISGGADSKLCISSQI 47
>XP_010258084.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Nelumbo
nucifera] XP_010258085.1 PREDICTED: ribosome biogenesis
protein WDR12 homolog [Nelumbo nucifera]
Length = 439
Score = 72.0 bits (175), Expect = 4e-12
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICV 117
LAVIDSHKDKVLCADWWKS+ V+SGG DSKLCISS I +
Sbjct: 400 LAVIDSHKDKVLCADWWKSDSVISGGADSKLCISSGISI 438
>ONK75806.1 uncharacterized protein A4U43_C03F20740 [Asparagus officinalis]
Length = 178
Score = 69.3 bits (168), Expect = 4e-12
Identities = 31/39 (79%), Positives = 33/39 (84%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICV 117
LAVIDSHKDKVLC DWWK + VVSGG DSKLCISS I +
Sbjct: 139 LAVIDSHKDKVLCVDWWKGDSVVSGGADSKLCISSGISI 177
>KHN25575.1 Ribosome biogenesis protein wdr12 [Glycine soja]
Length = 122
Score = 67.8 bits (164), Expect = 5e-12
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +1
Query: 1 LAVIDSHKDKVLCADWWKSNCVVSGGVDSKLCISSEICV 117
L+VI+SH DKVL ADWWKSN V+SGG DSKLCISSEI V
Sbjct: 83 LSVIESHSDKVLSADWWKSNSVISGGADSKLCISSEIPV 121