BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00043420
         (438 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019073825.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   3e-07
XP_008383901.1 PREDICTED: pentatricopeptide repeat-containing pr...    52   6e-07

>XP_019073825.1 PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Vitis vinifera]
          Length = 218

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 38/74 (51%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = +1

Query: 64  TSSTTNRNNYQLLLLRAGPRLKPLQQVHAHLTVSGS-DIPXXXXXXXXXXCAAGSILYTC 240
           T S ++   YQ+LL  AGPRLKPLQQVHAHL VSGS              C AGSILYT 
Sbjct: 9   TLSPSHSPAYQVLL-HAGPRLKPLQQVHAHLIVSGSYRSRALLTKLLTLACTAGSILYTR 67

Query: 241 SLPTLLLNPQHQLF 282
            L   + NP   LF
Sbjct: 68  QLFFSITNPDSFLF 81


>XP_008383901.1 PREDICTED: pentatricopeptide repeat-containing protein At2g33760
           [Malus domestica]
          Length = 591

 Score = 52.0 bits (123), Expect(2) = 6e-07
 Identities = 29/48 (60%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = +1

Query: 97  LLLLRAGPRLKPLQQVHAHLTVSGSD-IPXXXXXXXXXXCAAGSILYT 237
           L LLRAGPR+KPLQQVHAHL VSGS              C AGSI YT
Sbjct: 23  LALLRAGPRIKPLQQVHAHLVVSGSHRSRALLTKLLTLACEAGSIFYT 70



 Score = 28.5 bits (62), Expect(2) = 6e-07
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 248 QLFFSIPNXXXXXXXXXXXXXXKFHFRLHSILFYHRMISSCL 373
           +LF S+P               KF F  +++ FYH M++ C+
Sbjct: 72  RLFLSVPIPDAFLFNSLIKASSKFGFPQYTVFFYHSMLAFCI 113