BLASTX nr result

ID: Panax25_contig00043395 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00043395
         (731 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OIT01967.1 putative ribonuclease h protein [Nicotiana attenuata]       61   9e-08
XP_009795398.1 PREDICTED: uncharacterized protein LOC104242095 [...    60   2e-07
OIT29927.1 putative ribonuclease h protein [Nicotiana attenuata]       59   4e-07
OAY52390.1 hypothetical protein MANES_04G079500 [Manihot esculenta]    58   1e-06
OIT29929.1 putative ribonuclease h protein [Nicotiana attenuata]       57   4e-06

>OIT01967.1 putative ribonuclease h protein [Nicotiana attenuata]
          Length = 221

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = -2

Query: 229 FSSCGYLKLNTDDSCF--RGSSSCGRVIRDDSRKWVYDYMRKIPGTKTSSLVAEICGIYK 56
           F   GY+K+NTD S     G +  G + RDD R+W+  +  ++    TSS+ AE+  I+ 
Sbjct: 44  FPPQGYIKINTDGSFMPNSGLAGFGGIARDDKRRWIGGFYGRLSMKATSSITAELWAIHG 103

Query: 55  GLLLIKDMGFKKVFIETD 2
           GL L K+   KKV IETD
Sbjct: 104 GLTLAKNYNLKKVLIETD 121


>XP_009795398.1 PREDICTED: uncharacterized protein LOC104242095 [Nicotiana
           sylvestris]
          Length = 229

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
 Frame = -2

Query: 250 HTQNTLE-----------FSSCGYLKLNTDDSCF--RGSSSCGRVIRDDSRKWVYDYMRK 110
           H+Q+T++           F   G++K+NTDDS     G +  G V RDD  +W+  +  +
Sbjct: 26  HSQSTIKQSNAPVYINWSFPPSGFIKINTDDSFIPNSGLAGFGGVARDDKGRWIGGFYDR 85

Query: 109 IPGTKTSSLVAEICGIYKGLLLIKDMGFKKVFIETD 2
           +    TSSL  E+  I+ GL L K+   KKV IETD
Sbjct: 86  LSKKATSSLTLELWAIHGGLTLAKNYNLKKVIIETD 121


>OIT29927.1 putative ribonuclease h protein [Nicotiana attenuata]
          Length = 214

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
 Frame = -2

Query: 229 FSSCGYLKLNTDDSCF--RGSSSCGRVIRDDSRKWVYDYMRKIPGTKTSSLVAEICGIYK 56
           F   GY+K+NTDDS     G +  G + RDD  +W+  +  ++    TSS+  E+  I+ 
Sbjct: 43  FPPQGYIKINTDDSFMPNSGLAGFGGIARDDKGRWIGGFYGRLSMKATSSITPELWAIHG 102

Query: 55  GLLLIKDMGFKKVFIETD 2
           GL L K+   KKV IETD
Sbjct: 103 GLTLAKNYNLKKVLIETD 120


>OAY52390.1 hypothetical protein MANES_04G079500 [Manihot esculenta]
          Length = 209

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = -2

Query: 217 GYLKLNTDDSCFR--GSSSCGRVIRDDSRKWVYDYMRKIPGTKTSSLVAEICGIYKGLLL 44
           G++KLN D SC    G +S G ++RD S  WV  +   I   +TS L AEI GI  GL L
Sbjct: 49  GWMKLNVDGSCLGNPGPASAGGLLRDSSSNWVIGFGLNIG--ETSILNAEIIGILVGLQL 106

Query: 43  IKDMGFKKVFIETD 2
           +  MGF++V +E+D
Sbjct: 107 VWSMGFRRVIVESD 120


>OIT29929.1 putative ribonuclease h protein [Nicotiana attenuata]
          Length = 215

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
 Frame = -2

Query: 229 FSSCGYLKLNTDDSCF--RGSSSCGRVIRDDSRKWVYDYMRKIPGTKTSSLVAEICGIYK 56
           F   GY+K+NTD S     G +  G + RDD  +W+  +  ++    TSS+  E+  I+ 
Sbjct: 44  FPPQGYIKINTDGSFMPNSGLAGFGGIARDDKGRWIGGFYGRLSVKATSSITPELWAIHG 103

Query: 55  GLLLIKDMGFKKVFIETD 2
           GL L K+   KKV IETD
Sbjct: 104 GLTLAKNYNLKKVLIETD 121


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