BLASTX nr result
ID: Panax25_contig00043347
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00043347
(598 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_019074131.1 PREDICTED: RNA polymerase II transcription factor... 254 3e-80
CAN81292.1 hypothetical protein VITISV_005315 [Vitis vinifera] 254 3e-80
XP_003635508.2 PREDICTED: RNA polymerase II transcription factor... 254 3e-80
XP_006347058.1 PREDICTED: general transcription factor IIH subun... 248 9e-78
KVH96938.1 Transcription factor TFIIH subunit p52/Tfb2 [Cynara c... 246 1e-77
XP_010316742.1 PREDICTED: RNA polymerase II transcription factor... 244 3e-77
KJB69494.1 hypothetical protein B456_011G026700 [Gossypium raimo... 243 6e-77
XP_019175446.1 PREDICTED: RNA polymerase II transcription factor... 246 1e-76
EOY28282.1 Transcription factor-related isoform 4 [Theobroma cacao] 245 1e-76
XP_019067850.1 PREDICTED: RNA polymerase II transcription factor... 244 1e-76
EOY28279.1 Transcription factor-related isoform 1 [Theobroma cacao] 245 1e-76
XP_019175439.1 PREDICTED: RNA polymerase II transcription factor... 246 1e-76
XP_007025657.2 PREDICTED: RNA polymerase II transcription factor... 244 3e-76
XP_016711087.1 PREDICTED: RNA polymerase II transcription factor... 243 3e-76
XP_016559882.1 PREDICTED: RNA polymerase II transcription factor... 244 4e-76
XP_011090547.1 PREDICTED: general transcription factor IIH subun... 244 4e-76
XP_004232855.1 PREDICTED: RNA polymerase II transcription factor... 244 4e-76
XP_008225066.1 PREDICTED: RNA polymerase II transcription factor... 244 6e-76
XP_016726206.1 PREDICTED: RNA polymerase II transcription factor... 243 7e-76
XP_012456827.1 PREDICTED: general transcription factor IIH subun... 243 7e-76
>XP_019074131.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
[Vitis vinifera]
Length = 442
Score = 254 bits (650), Expect = 3e-80
Identities = 126/148 (85%), Positives = 135/148 (91%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+IIAKNFMDMVASLPAMKLD LY N FICEAILRSLPPL+KKY+LQMLYIDVPVTA
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDALYHNTFICEAILRSLPPLAKKYILQMLYIDVPVTA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
K+MEEWVLADG SKHRVAIDRLIQLRVFTET DRKKET+YRLN TFQ N+Q H+I+GGVL
Sbjct: 61 KAMEEWVLADGFSKHRVAIDRLIQLRVFTETSDRKKETSYRLNPTFQTNLQKHLIYGGVL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS ITVRLPS DL+AYA QWE
Sbjct: 121 PREPMPSNITVRLPSLDDLEAYALGQWE 148
>CAN81292.1 hypothetical protein VITISV_005315 [Vitis vinifera]
Length = 451
Score = 254 bits (650), Expect = 3e-80
Identities = 126/148 (85%), Positives = 135/148 (91%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+IIAKNFMDMVASLPAMKLD LY N FICEAILRSLPPL+KKY+LQMLYIDVPVTA
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDALYHNTFICEAILRSLPPLAKKYILQMLYIDVPVTA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
K+MEEWVLADG SKHRVAIDRLIQLRVFTET DRKKET+YRLN TFQ N+Q H+I+GGVL
Sbjct: 61 KAMEEWVLADGFSKHRVAIDRLIQLRVFTETSDRKKETSYRLNPTFQTNLQKHLIYGGVL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS ITVRLPS DL+AYA QWE
Sbjct: 121 PREPMPSNITVRLPSLDDLEAYALGQWE 148
>XP_003635508.2 PREDICTED: RNA polymerase II transcription factor B subunit 2
[Vitis vinifera]
Length = 451
Score = 254 bits (650), Expect = 3e-80
Identities = 126/148 (85%), Positives = 135/148 (91%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+IIAKNFMDMVASLPAMKLD LY N FICEAILRSLPPL+KKY+LQMLYIDVPVTA
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDALYHNTFICEAILRSLPPLAKKYILQMLYIDVPVTA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
K+MEEWVLADG SKHRVAIDRLIQLRVFTET DRKKET+YRLN TFQ N+Q H+I+GGVL
Sbjct: 61 KAMEEWVLADGFSKHRVAIDRLIQLRVFTETSDRKKETSYRLNPTFQTNLQKHLIYGGVL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS ITVRLPS DL+AYA QWE
Sbjct: 121 PREPMPSNITVRLPSLDDLEAYALGQWE 148
>XP_006347058.1 PREDICTED: general transcription factor IIH subunit 4 [Solanum
tuberosum]
Length = 453
Score = 248 bits (634), Expect = 9e-78
Identities = 119/148 (80%), Positives = 132/148 (89%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+I+A+NFMDMVASLP MKLD LYDN FICEAILRSLPPL+KKYVLQMLYID+P+TA
Sbjct: 1 MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KSMEEWVL DG SKH+VAIDRLIQLRV TET DRKKE TY+LN FQ N+Q HI+HGG+L
Sbjct: 61 KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEATYQLNPKFQFNLQKHIVHGGIL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS ITVRLPS +L+AYA EQWE
Sbjct: 121 PREPMPSNITVRLPSLEELEAYAVEQWE 148
>KVH96938.1 Transcription factor TFIIH subunit p52/Tfb2 [Cynara cardunculus
var. scolymus]
Length = 406
Score = 246 bits (629), Expect = 1e-77
Identities = 117/148 (79%), Positives = 134/148 (90%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQVRIIAKNFMDMVASLPAMKLD+LY+N FICEAILRSLPPL+KKYVLQ+LYID PVTA
Sbjct: 1 MPQVRIIAKNFMDMVASLPAMKLDRLYENAFICEAILRSLPPLAKKYVLQLLYIDAPVTA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
S++EWVL DG++KHRVA+DRLIQLR+FTETVDRKKE TY+LN FQ N++ HI+HGGVL
Sbjct: 61 SSLQEWVLVDGATKHRVAVDRLIQLRIFTETVDRKKEATYKLNLMFQMNLRKHIVHGGVL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPM + ITVRLPS +LD YAS+QWE
Sbjct: 121 PREPMAANITVRLPSLEELDNYASQQWE 148
>XP_010316742.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X3 [Solanum lycopersicum]
Length = 365
Score = 244 bits (623), Expect = 3e-77
Identities = 118/148 (79%), Positives = 131/148 (88%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+I+A+NFMDMVASLP MKLD LYDN FICEAILRSLPPL+KKYVLQMLYID+P+TA
Sbjct: 1 MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KSMEEWVL DG SKH+VAIDRLIQLRV TET DRKKE Y+LN FQ N+Q HI++GGVL
Sbjct: 61 KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQFNLQKHIVYGGVL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS ITVRLPS +L+AYA EQWE
Sbjct: 121 PREPMPSNITVRLPSLEELEAYAVEQWE 148
>KJB69494.1 hypothetical protein B456_011G026700 [Gossypium raimondii]
Length = 362
Score = 243 bits (621), Expect = 6e-77
Identities = 116/148 (78%), Positives = 136/148 (91%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+IIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPL+KKYVLQMLYID+P+T+
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDLLYRNQFICEAILRSLPPLAKKYVLQMLYIDIPITS 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KS++EW+LADGSSKH+VAIDRLIQLRVF E +DRKKETTY+LNSTFQ N++ H+I GG+L
Sbjct: 61 KSLQEWLLADGSSKHKVAIDRLIQLRVF-EVIDRKKETTYKLNSTFQTNLRKHMISGGIL 119
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMP ++T RLP+S +LDAYA EQWE
Sbjct: 120 PREPMPQSVTARLPTSEELDAYAHEQWE 147
>XP_019175446.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Ipomoea nil]
Length = 452
Score = 246 bits (627), Expect = 1e-76
Identities = 116/148 (78%), Positives = 134/148 (90%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQVRI+AKNFMDMVASLPAMKLD LYDNPFICEAILRSLPPL+KKYVLQ+LYID P+ A
Sbjct: 1 MPQVRIVAKNFMDMVASLPAMKLDSLYDNPFICEAILRSLPPLAKKYVLQLLYIDSPIAA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KS+ EWVLADGS+KH+VAIDRLIQLR+ +ET DRKK+++Y+LN FQ N++ HI+HGG+L
Sbjct: 61 KSIGEWVLADGSTKHKVAIDRLIQLRLLSETFDRKKDSSYQLNPKFQYNLRKHIVHGGIL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS ITVRLP +LDAYASEQWE
Sbjct: 121 PREPMPSNITVRLPKLEELDAYASEQWE 148
>EOY28282.1 Transcription factor-related isoform 4 [Theobroma cacao]
Length = 445
Score = 245 bits (626), Expect = 1e-76
Identities = 118/148 (79%), Positives = 136/148 (91%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+IIAKNFMDMVASLPA+KLD LY N FICEAILRS+PPL+KKYVLQMLYIDVPVTA
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDMLYRNQFICEAILRSMPPLAKKYVLQMLYIDVPVTA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KS+EEWVLADGSSKH+VAIDRLIQLR+ E +DRKKET+Y+LN TFQ N++ H+I+GG+L
Sbjct: 61 KSLEEWVLADGSSKHKVAIDRLIQLRIL-EVIDRKKETSYKLNPTFQTNLRKHLIYGGIL 119
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS +TVRLP+S +LDAYA EQWE
Sbjct: 120 PREPMPSNVTVRLPTSEELDAYAHEQWE 147
>XP_019067850.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Solanum lycopersicum]
Length = 409
Score = 244 bits (623), Expect = 1e-76
Identities = 118/148 (79%), Positives = 131/148 (88%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+I+A+NFMDMVASLP MKLD LYDN FICEAILRSLPPL+KKYVLQMLYID+P+TA
Sbjct: 1 MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KSMEEWVL DG SKH+VAIDRLIQLRV TET DRKKE Y+LN FQ N+Q HI++GGVL
Sbjct: 61 KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQFNLQKHIVYGGVL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS ITVRLPS +L+AYA EQWE
Sbjct: 121 PREPMPSNITVRLPSLEELEAYAVEQWE 148
>EOY28279.1 Transcription factor-related isoform 1 [Theobroma cacao]
Length = 451
Score = 245 bits (626), Expect = 1e-76
Identities = 118/148 (79%), Positives = 136/148 (91%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+IIAKNFMDMVASLPA+KLD LY N FICEAILRS+PPL+KKYVLQMLYIDVPVTA
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDMLYRNQFICEAILRSMPPLAKKYVLQMLYIDVPVTA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KS+EEWVLADGSSKH+VAIDRLIQLR+ E +DRKKET+Y+LN TFQ N++ H+I+GG+L
Sbjct: 61 KSLEEWVLADGSSKHKVAIDRLIQLRIL-EVIDRKKETSYKLNPTFQTNLRKHLIYGGIL 119
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS +TVRLP+S +LDAYA EQWE
Sbjct: 120 PREPMPSNVTVRLPTSEELDAYAHEQWE 147
>XP_019175439.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Ipomoea nil]
Length = 466
Score = 246 bits (627), Expect = 1e-76
Identities = 116/148 (78%), Positives = 134/148 (90%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQVRI+AKNFMDMVASLPAMKLD LYDNPFICEAILRSLPPL+KKYVLQ+LYID P+ A
Sbjct: 1 MPQVRIVAKNFMDMVASLPAMKLDSLYDNPFICEAILRSLPPLAKKYVLQLLYIDSPIAA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KS+ EWVLADGS+KH+VAIDRLIQLR+ +ET DRKK+++Y+LN FQ N++ HI+HGG+L
Sbjct: 61 KSIGEWVLADGSTKHKVAIDRLIQLRLLSETFDRKKDSSYQLNPKFQYNLRKHIVHGGIL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS ITVRLP +LDAYASEQWE
Sbjct: 121 PREPMPSNITVRLPKLEELDAYASEQWE 148
>XP_007025657.2 PREDICTED: RNA polymerase II transcription factor B subunit 2
[Theobroma cacao]
Length = 451
Score = 244 bits (624), Expect = 3e-76
Identities = 118/148 (79%), Positives = 135/148 (91%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+IIAKNFMDMVASLPA+KLD LY N FICEAILRS+PPL+KKYVLQMLYIDVPVTA
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDMLYRNQFICEAILRSMPPLAKKYVLQMLYIDVPVTA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KS+EEWVLADGSSKH+VAIDRLIQLR+ E +DRKKET Y+LN TFQ N++ H+I+GG+L
Sbjct: 61 KSLEEWVLADGSSKHKVAIDRLIQLRIL-EVIDRKKETIYKLNPTFQTNLRKHLIYGGIL 119
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS +TVRLP+S +LDAYA EQWE
Sbjct: 120 PREPMPSNVTVRLPTSEELDAYAHEQWE 147
>XP_016711087.1 PREDICTED: RNA polymerase II transcription factor B subunit 2-like
[Gossypium hirsutum]
Length = 415
Score = 243 bits (621), Expect = 3e-76
Identities = 116/148 (78%), Positives = 136/148 (91%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+IIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPL+KKYVLQMLYID+P+T+
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDLLYRNQFICEAILRSLPPLAKKYVLQMLYIDIPITS 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KS++EW+LADGSSKH+VAIDRLIQLRVF E +DRKKETTY+LNSTFQ N++ H+I GG+L
Sbjct: 61 KSLQEWLLADGSSKHKVAIDRLIQLRVF-EVIDRKKETTYKLNSTFQTNLRKHMISGGIL 119
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMP ++T RLP+S +LDAYA EQWE
Sbjct: 120 PREPMPQSVTARLPTSEELDAYAHEQWE 147
>XP_016559882.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
[Capsicum annuum]
Length = 453
Score = 244 bits (623), Expect = 4e-76
Identities = 117/148 (79%), Positives = 132/148 (89%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+I+A+NFMDMVASLP MKLD LYDN FICEAILRSLPPL+KKYVLQ+LYID P++A
Sbjct: 1 MPQVKIVARNFMDMVASLPTMKLDMLYDNSFICEAILRSLPPLAKKYVLQLLYIDKPISA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
K+MEEWVL DG SKH+VAIDRLIQLRV TET DRKKE TY+LN FQ N+Q HI+HGGVL
Sbjct: 61 KTMEEWVLPDGFSKHKVAIDRLIQLRVMTETYDRKKEATYQLNPKFQFNLQKHIVHGGVL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS ITVRLPS +L+AYA+EQWE
Sbjct: 121 PREPMPSNITVRLPSLEELEAYAAEQWE 148
>XP_011090547.1 PREDICTED: general transcription factor IIH subunit 4 [Sesamum
indicum]
Length = 453
Score = 244 bits (623), Expect = 4e-76
Identities = 117/148 (79%), Positives = 131/148 (88%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQ++I+A+NFMDMVASLPAMKLDKLY+N FICEAILRSLPPL+KKYVLQ+LYID PVTA
Sbjct: 1 MPQLKIVARNFMDMVASLPAMKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVTA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
K +EEWVLADG SKHRVA+DRLIQLR+ TETV+RKKE TY N TFQ N+Q HI+HGGVL
Sbjct: 61 KWLEEWVLADGISKHRVAVDRLIQLRILTETVERKKEATYLFNPTFQRNLQKHILHGGVL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS I RLPS DLDAYA +QWE
Sbjct: 121 PREPMPSNIIARLPSLEDLDAYAVQQWE 148
>XP_004232855.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Solanum lycopersicum] XP_015065870.1
PREDICTED: general transcription factor IIH subunit 4
[Solanum pennellii]
Length = 453
Score = 244 bits (623), Expect = 4e-76
Identities = 118/148 (79%), Positives = 131/148 (88%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+I+A+NFMDMVASLP MKLD LYDN FICEAILRSLPPL+KKYVLQMLYID+P+TA
Sbjct: 1 MPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KSMEEWVL DG SKH+VAIDRLIQLRV TET DRKKE Y+LN FQ N+Q HI++GGVL
Sbjct: 61 KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQFNLQKHIVYGGVL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS ITVRLPS +L+AYA EQWE
Sbjct: 121 PREPMPSNITVRLPSLEELEAYAVEQWE 148
>XP_008225066.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
[Prunus mume]
Length = 455
Score = 244 bits (622), Expect = 6e-76
Identities = 120/148 (81%), Positives = 134/148 (90%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQVRIIAKNFMDMVA+LPAMKLDKLY+N FICEAILRSLPPL+KKYVLQML I+VPVTA
Sbjct: 1 MPQVRIIAKNFMDMVAALPAMKLDKLYENAFICEAILRSLPPLAKKYVLQMLCIEVPVTA 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KSMEEWVL DG SKHRVAIDRLIQLR+FTETVDRK+ETTY LN FQ N++ +++G VL
Sbjct: 61 KSMEEWVLPDGVSKHRVAIDRLIQLRIFTETVDRKRETTYTLNPIFQTNLKKLLLYGVVL 120
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMPS +TVRLPSS DL+A+A EQWE
Sbjct: 121 PREPMPSNVTVRLPSSEDLEAFALEQWE 148
>XP_016726206.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
[Gossypium hirsutum]
Length = 451
Score = 243 bits (621), Expect = 7e-76
Identities = 116/148 (78%), Positives = 136/148 (91%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+IIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPL+KKYVLQMLYID+P+T+
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDLLYRNQFICEAILRSLPPLAKKYVLQMLYIDIPITS 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KS++EW+LADGSSKH+VAIDRLIQLRVF E +DRKKETTY+LNSTFQ N++ H+I GG+L
Sbjct: 61 KSLQEWLLADGSSKHKVAIDRLIQLRVF-EVIDRKKETTYKLNSTFQTNLRKHMISGGIL 119
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMP ++T RLP+S +LDAYA EQWE
Sbjct: 120 PREPMPQSVTARLPTSEELDAYAHEQWE 147
>XP_012456827.1 PREDICTED: general transcription factor IIH subunit 4 [Gossypium
raimondii] KJB69492.1 hypothetical protein
B456_011G026700 [Gossypium raimondii]
Length = 451
Score = 243 bits (621), Expect = 7e-76
Identities = 116/148 (78%), Positives = 136/148 (91%)
Frame = +2
Query: 155 MPQVRIIAKNFMDMVASLPAMKLDKLYDNPFICEAILRSLPPLSKKYVLQMLYIDVPVTA 334
MPQV+IIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPL+KKYVLQMLYID+P+T+
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDLLYRNQFICEAILRSLPPLAKKYVLQMLYIDIPITS 60
Query: 335 KSMEEWVLADGSSKHRVAIDRLIQLRVFTETVDRKKETTYRLNSTFQNNIQNHIIHGGVL 514
KS++EW+LADGSSKH+VAIDRLIQLRVF E +DRKKETTY+LNSTFQ N++ H+I GG+L
Sbjct: 61 KSLQEWLLADGSSKHKVAIDRLIQLRVF-EVIDRKKETTYKLNSTFQTNLRKHMISGGIL 119
Query: 515 PREPMPSTITVRLPSSVDLDAYASEQWE 598
PREPMP ++T RLP+S +LDAYA EQWE
Sbjct: 120 PREPMPQSVTARLPTSEELDAYAHEQWE 147