BLASTX nr result

ID: Panax25_contig00043319 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00043319
         (363 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017241259.1 PREDICTED: pentatricopeptide repeat-containing pr...    77   6e-14
OAY60485.1 hypothetical protein MANES_01G116200 [Manihot esculenta]    65   5e-10
CBI33534.3 unnamed protein product, partial [Vitis vinifera]           62   1e-08
XP_010693912.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   2e-08
XP_002272930.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   2e-08
XP_007215347.1 hypothetical protein PRUPE_ppa005397mg [Prunus pe...    58   2e-07
ONI17450.1 hypothetical protein PRUPE_3G160100 [Prunus persica]        58   3e-07
GAV73135.1 PPR domain-containing protein/PPR_2 domain-containing...    57   3e-07
KNA22345.1 hypothetical protein SOVF_035000 [Spinacia oleracea]        57   6e-07
XP_012077781.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   6e-07
XP_010274756.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   8e-07
XP_006383312.1 hypothetical protein POPTR_0005s14380g, partial [...    56   9e-07
XP_010274683.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   9e-07
XP_009371795.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   9e-07
XP_018816985.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   1e-06
XP_012854441.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   1e-06
XP_018816984.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   1e-06
XP_018816983.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   1e-06
XP_018816982.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   1e-06
XP_018816981.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   1e-06

>XP_017241259.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Daucus carota subsp. sativus]
           KZN01986.1 hypothetical protein DCAR_010740 [Daucus
           carota subsp. sativus]
          Length = 503

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 39/62 (62%), Positives = 50/62 (80%), Gaps = 5/62 (8%)
 Frame = +3

Query: 192 TSKINPKKRNLSS-----DSASHRDQVGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVS 356
           +S+++ KKR+ S+     DS + + +VGKRPTF SY DTPNLPPKVKLLCEIIA+TPS+S
Sbjct: 15  SSRLDYKKRHRSASLVHNDSPAGKHKVGKRPTFASYLDTPNLPPKVKLLCEIIANTPSLS 74

Query: 357 IE 362
           IE
Sbjct: 75  IE 76


>OAY60485.1 hypothetical protein MANES_01G116200 [Manihot esculenta]
          Length = 508

 Score = 65.5 bits (158), Expect = 5e-10
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = +3

Query: 204 NPKKRNLSSDSASHRDQVGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           +P     +S+  S  +   KRPTF SY DTPNLPPKVKLLCEIIA+TPS S+E
Sbjct: 26  SPSSSTTTSNLQSSSNPQTKRPTFPSYLDTPNLPPKVKLLCEIIANTPSSSVE 78


>CBI33534.3 unnamed protein product, partial [Vitis vinifera]
          Length = 506

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 32/55 (58%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
 Frame = +3

Query: 204 NPKKRNLSS--DSASHRDQVGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           +P +R+ SS  DSA+H  Q  KRP+F +Y +TPNL PKV+LLCEIIA+TPS ++E
Sbjct: 26  SPARRHSSSTTDSATHH-QTPKRPSFPTYLETPNLSPKVRLLCEIIANTPSSTVE 79


>XP_010693912.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial [Beta vulgaris subsp. vulgaris] KMT18652.1
           hypothetical protein BVRB_2g027810 [Beta vulgaris subsp.
           vulgaris]
          Length = 504

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = +3

Query: 255 VGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           +GKRP FVSY ++PNLPPK+KL+CEI+A+TPS S+E
Sbjct: 42  LGKRPNFVSYLESPNLPPKIKLICEIVANTPSSSVE 77


>XP_002272930.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial [Vitis vinifera] XP_010660324.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial [Vitis vinifera] XP_019080870.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial [Vitis vinifera]
          Length = 502

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 29/53 (54%), Positives = 41/53 (77%)
 Frame = +3

Query: 204 NPKKRNLSSDSASHRDQVGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           N +  + ++DSA+H  Q  KRP+F +Y +TPNL PKV+LLCEIIA+TPS ++E
Sbjct: 24  NKRHSSSTTDSATHH-QTPKRPSFPTYLETPNLSPKVRLLCEIIANTPSSTVE 75


>XP_007215347.1 hypothetical protein PRUPE_ppa005397mg [Prunus persica]
          Length = 463

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +3

Query: 261 KRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           KRPTF SY DTPNLPPK++LLCEI+A T ++S+E
Sbjct: 3   KRPTFASYLDTPNLPPKIRLLCEIVAKTHTLSVE 36


>ONI17450.1 hypothetical protein PRUPE_3G160100 [Prunus persica]
          Length = 535

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +3

Query: 261 KRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           KRPTF SY DTPNLPPK++LLCEI+A T ++S+E
Sbjct: 75  KRPTFASYLDTPNLPPKIRLLCEIVAKTHTLSVE 108


>GAV73135.1 PPR domain-containing protein/PPR_2 domain-containing protein
           [Cephalotus follicularis]
          Length = 501

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +3

Query: 261 KRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           KRP F SY DTP+L PKVKLLCEIIA+TPS++IE
Sbjct: 41  KRPVFSSYKDTPDLAPKVKLLCEIIAATPSLTIE 74


>KNA22345.1 hypothetical protein SOVF_035000 [Spinacia oleracea]
          Length = 505

 Score = 56.6 bits (135), Expect = 6e-07
 Identities = 25/38 (65%), Positives = 33/38 (86%), Gaps = 2/38 (5%)
 Frame = +3

Query: 255 VGK--RPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           VGK  RP F+SY D+PNLP K+KL+CEI+A+TPS+S+E
Sbjct: 41  VGKQQRPNFISYLDSPNLPSKIKLICEIVANTPSLSVE 78


>XP_012077781.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Jatropha curcas] KDP33157.1
           hypothetical protein JCGZ_13422 [Jatropha curcas]
          Length = 510

 Score = 56.6 bits (135), Expect = 6e-07
 Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 7/58 (12%)
 Frame = +3

Query: 210 KKRNLSSDSASHRDQVG-------KRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           KK +  S S+S R           KRP F SY DTPNLP K+KLLCE+IA+TPS ++E
Sbjct: 26  KKHHFRSPSSSSRATAEHQSSYSPKRPNFPSYIDTPNLPSKIKLLCELIANTPSSAVE 83


>XP_010274756.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Nelumbo nucifera]
          Length = 320

 Score = 56.2 bits (134), Expect = 8e-07
 Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 11/68 (16%)
 Frame = +3

Query: 192 TSKINPKKRNLSSDSASHRDQVG-----------KRPTFVSYNDTPNLPPKVKLLCEIIA 338
           +SK    K+  SS  A+     G           +RP F+SY ++PNLPPK KLLCEIIA
Sbjct: 14  SSKPEQNKKRQSSSYANPASDEGPEQQKQNQRQSRRPAFISYLESPNLPPKTKLLCEIIA 73

Query: 339 STPSVSIE 362
           +TPS ++E
Sbjct: 74  NTPSPTVE 81


>XP_006383312.1 hypothetical protein POPTR_0005s14380g, partial [Populus
           trichocarpa] ERP61109.1 hypothetical protein
           POPTR_0005s14380g, partial [Populus trichocarpa]
          Length = 497

 Score = 56.2 bits (134), Expect = 9e-07
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +3

Query: 210 KKRNLSSDSASHRDQVGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           K R+  S S+S    + K+P+F SY +TPNLPP +KLLCEIIA+TPS ++E
Sbjct: 21  KHRHHHSPSSS---SITKKPSFQSYLETPNLPPTIKLLCEIIANTPSHNVE 68


>XP_010274683.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Nelumbo nucifera]
          Length = 508

 Score = 56.2 bits (134), Expect = 9e-07
 Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 11/68 (16%)
 Frame = +3

Query: 192 TSKINPKKRNLSSDSASHRDQVG-----------KRPTFVSYNDTPNLPPKVKLLCEIIA 338
           +SK    K+  SS  A+     G           +RP F+SY ++PNLPPK KLLCEIIA
Sbjct: 14  SSKPEQNKKRQSSSYANPASDEGPEQQKQNQRQSRRPAFISYLESPNLPPKTKLLCEIIA 73

Query: 339 STPSVSIE 362
           +TPS ++E
Sbjct: 74  NTPSPTVE 81


>XP_009371795.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Pyrus x bretschneideri]
          Length = 535

 Score = 56.2 bits (134), Expect = 9e-07
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = +3

Query: 255 VGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           V KRPTF SY DTPNLPPK+ LLCEI+A T + S+E
Sbjct: 73  VAKRPTFASYLDTPNLPPKIGLLCEILAKTHTPSVE 108


>XP_018816985.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X5 [Juglans regia]
          Length = 521

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = +3

Query: 228 SDSASHRDQVGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           S   +H      RP F SY+D P+L PKVKL CEIIA+TPSVS+E
Sbjct: 46  SPPQTHLPNKRSRPAFASYSDAPDLHPKVKLFCEIIATTPSVSVE 90


>XP_012854441.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Erythranthe guttata] XP_012854448.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g77360, mitochondrial-like [Erythranthe guttata]
           EYU44576.1 hypothetical protein MIMGU_mgv1a004507mg
           [Erythranthe guttata]
          Length = 523

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 26/55 (47%), Positives = 38/55 (69%)
 Frame = +3

Query: 198 KINPKKRNLSSDSASHRDQVGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           +I+P   N    ++ HR   GKR  F+SY + P+LPPKVK+LC+IIA TP+ ++E
Sbjct: 44  RISPPS-NFPDQNSRHR-VTGKRSNFISYTELPSLPPKVKILCQIIAETPAAAVE 96


>XP_018816984.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X4 [Juglans regia]
          Length = 530

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = +3

Query: 228 SDSASHRDQVGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           S   +H      RP F SY+D P+L PKVKL CEIIA+TPSVS+E
Sbjct: 46  SPPQTHLPNKRSRPAFASYSDAPDLHPKVKLFCEIIATTPSVSVE 90


>XP_018816983.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X3 [Juglans regia]
          Length = 553

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = +3

Query: 228 SDSASHRDQVGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           S   +H      RP F SY+D P+L PKVKL CEIIA+TPSVS+E
Sbjct: 46  SPPQTHLPNKRSRPAFASYSDAPDLHPKVKLFCEIIATTPSVSVE 90


>XP_018816982.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X2 [Juglans regia]
          Length = 564

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = +3

Query: 228 SDSASHRDQVGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           S   +H      RP F SY+D P+L PKVKL CEIIA+TPSVS+E
Sbjct: 46  SPPQTHLPNKRSRPAFASYSDAPDLHPKVKLFCEIIATTPSVSVE 90


>XP_018816981.1 PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X1 [Juglans regia]
          Length = 575

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = +3

Query: 228 SDSASHRDQVGKRPTFVSYNDTPNLPPKVKLLCEIIASTPSVSIE 362
           S   +H      RP F SY+D P+L PKVKL CEIIA+TPSVS+E
Sbjct: 46  SPPQTHLPNKRSRPAFASYSDAPDLHPKVKLFCEIIATTPSVSVE 90


Top