BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00043178
         (1005 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC26250.1 contains similarity to reverse transcriptase (Pfam: r...   542   0.0  
BAA22288.1 polyprotein [Oryza australiensis]                          513   e-169
AAV85747.1 Integrase core domain, putative [Oryza sativa Japonic...   493   e-162
ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass...   479   e-153
CAE03845.1 OSJNBb0089K06.4 [Oryza sativa Japonica Group]              448   e-148
AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-clas...   443   e-145
ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass...   444   e-144
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass...   441   e-142
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]         434   e-140
AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]         420   e-135
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]    424   e-135
AAP52343.2 retrotransposon protein, putative, Ty1-copia subclass...   395   e-130
AAM74249.1 Putative retroelement [Oryza sativa Japonica Group]        395   e-130
ABA97705.1 retrotransposon protein, putative, Ty1-copia subclass...   389   e-126
KYP42262.1 Retrovirus-related Pol polyprotein from transposon TN...   377   e-123
AMY96445.1 gag/pol protein [Momordica dioica]                         383   e-119
EXX50149.1 gag-pol fusion protein [Rhizophagus irregularis DAOM ...   372   e-115
KZV20448.1 retrovirus-related Pol polyprotein from transposon TN...   330   e-107
AAR06328.1 putative polyprotein [Oryza sativa Japonica Group]         333   e-102
ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass...   333   e-102

>AAC26250.1 contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] CAB80804.1 putative
            retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  542 bits (1397), Expect = 0.0
 Identities = 255/335 (76%), Positives = 286/335 (85%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLEMPIYNINTKRFKSND 180
            IISVSCLD +GF F IKN  CSF  +D+ YG A L NGL++L+  MPIYNI TK+FKSND
Sbjct: 18   IISVSCLDMEGFHFSIKNKCCSFDRDDMFYGSAPLDNGLHVLNQSMPIYNIRTKKFKSND 77

Query: 181  SNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERAS 360
             N T+LWHCRLGHINEK I KLH DG L+SFD+ESYE CESCLLGKMTKAPFTGHSERAS
Sbjct: 78   LNPTFLWHCRLGHINEKHIQKLHSDGLLNSFDYESYETCESCLLGKMTKAPFTGHSERAS 137

Query: 361  DVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQN 540
            D+LGLIH+DVCGPMS+ ARG + YFITFTDDFSRYGYVYLM+H            NEVQN
Sbjct: 138  DLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMKHKSKSFENFKEFQNEVQN 197

Query: 541  QFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVRS 720
            QFGKSIKALRSDRGGEYLSQ F D L+ECGI+SQLTPPGTPQWNGVSERRNRTLLDMVRS
Sbjct: 198  QFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQWNGVSERRNRTLLDMVRS 257

Query: 721  MMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCEAFVKR 900
            MMSH DLP  FWG+ALET+AF LNR P+K+V+KTPYE+WTGK P++SF+KIWGCE++ KR
Sbjct: 258  MMSHTDLPSPFWGYALETSAFMLNRCPSKSVEKTPYEIWTGKVPNLSFLKIWGCESYAKR 317

Query: 901  LNSDKLGPKSDKCNFVGYPKETKGYYFYKPSENKV 1005
            L +DKLGPKSDKC FVGYPKETKGYYFY P++NKV
Sbjct: 318  LITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNKV 352


>BAA22288.1 polyprotein [Oryza australiensis]
          Length = 1317

 Score =  513 bits (1322), Expect = e-169
 Identities = 243/336 (72%), Positives = 278/336 (82%), Gaps = 1/336 (0%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLEM-PIYNINTKRFKSN 177
            +IS SCL  +G+ F   NN CS YL D+ Y  A L NGLY+L+LE  PIYNINT+R  SN
Sbjct: 373  VISASCLQAEGYDFRSMNNGCSIYLRDMFYFHAPLVNGLYVLNLEASPIYNINTERQLSN 432

Query: 178  DSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERA 357
            D N T++WHCRLGHIN+KR+ KLHKDG L SFDFES+E CESCLLGKMTKAPFTGHSERA
Sbjct: 433  DINPTFIWHCRLGHINKKRMEKLHKDGLLHSFDFESFETCESCLLGKMTKAPFTGHSERA 492

Query: 358  SDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQ 537
            SD+L L+H+DVCGPMSS ARG + YFITFTDDFSRYGY+YLMRH            NEVQ
Sbjct: 493  SDLLALVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIYLMRHKSESFEKFKEFQNEVQ 552

Query: 538  NQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVR 717
            N  GK+IK LRSDRGGEY+SQ+F + LK+CGI+ QLTPPGTPQWNGVSERRNRTLLDMVR
Sbjct: 553  NHLGKTIKFLRSDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGVSERRNRTLLDMVR 612

Query: 718  SMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCEAFVK 897
            SMMS +DLP+SFWG+ALETAA TLNRVP+K+V+KTPYE+WTG+ PS+SF+KIWGCEA+VK
Sbjct: 613  SMMSQSDLPLSFWGYALETAALTLNRVPSKSVEKTPYEIWTGQPPSLSFLKIWGCEAYVK 672

Query: 898  RLNSDKLGPKSDKCNFVGYPKETKGYYFYKPSENKV 1005
            RL SDKL PKSDKC  VGYPKETKGYYFY   + KV
Sbjct: 673  RLQSDKLTPKSDKCFVVGYPKETKGYYFYNREQAKV 708


>AAV85747.1 Integrase core domain, putative [Oryza sativa Japonica Group]
            AAX92956.1 retrotransposon protein, putative, Ty1-copia
            sub-class [Oryza sativa Japonica Group] ABA92827.2
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1184

 Score =  493 bits (1269), Expect = e-162
 Identities = 235/336 (69%), Positives = 268/336 (79%), Gaps = 1/336 (0%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLE-MPIYNINTKRFKSN 177
            +IS SCL  +G+ F   +N CS Y NDI Y  A + +GLYI++L    +YNIN KR + N
Sbjct: 349  VISASCLQAEGYGFRSVDNDCSVYYNDIFYFHAPMMSGLYIVNLNGYSVYNINAKRQRPN 408

Query: 178  DSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERA 357
            D N T++WHCRLGHINEKR+ K+H+DG L SFDFES+E CESCLLGKMTKAPFTG SERA
Sbjct: 409  DLNPTFIWHCRLGHINEKRMEKIHRDGLLHSFDFESFETCESCLLGKMTKAPFTGQSERA 468

Query: 358  SDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQ 537
            S++L L+H+DVCGPMSS ARG F YF TFTDDFSRYGYVYLMRH            NEVQ
Sbjct: 469  SELLALVHTDVCGPMSSTARGGFGYFFTFTDDFSRYGYVYLMRHKSESFEKFKEFHNEVQ 528

Query: 538  NQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVR 717
            N  GK+IK LRSDRGGEYLS +F + LKECGI+ QLTPPGTPQWNGVSE RNRTLLDMVR
Sbjct: 529  NHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSEWRNRTLLDMVR 588

Query: 718  SMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCEAFVK 897
            SMMS  +L +SFWG+ALET AFTLN VP+K+V KTPYE+WTGKRPS+SF+KIWGCE +VK
Sbjct: 589  SMMSQTNLLLSFWGYALETTAFTLNSVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEVYVK 648

Query: 898  RLNSDKLGPKSDKCNFVGYPKETKGYYFYKPSENKV 1005
            RL SDKL PKSDKC FVGYPKETKGYYFY   E KV
Sbjct: 649  RLQSDKLTPKSDKCFFVGYPKETKGYYFYNQEEGKV 684


>ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score =  479 bits (1233), Expect = e-153
 Identities = 232/336 (69%), Positives = 265/336 (78%), Gaps = 1/336 (0%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLE-MPIYNINTKRFKSN 177
            +IS SCL  +G+ F   +N CS Y NDI Y  A + +GLYI++L+   IYNIN KR   N
Sbjct: 849  VISASCLQAEGYGFRSVDNGCSVYYNDIFYFHAPMMSGLYIVNLDGCSIYNINAKRQGPN 908

Query: 178  DSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERA 357
            D N T++WHCRLGHINEKR+ KLH+DG L S DFES+E CESCLLGKMTKAPFTG SER 
Sbjct: 909  DLNPTFIWHCRLGHINEKRMEKLHRDGLLHSLDFESFETCESCLLGKMTKAPFTGQSERT 968

Query: 358  SDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQ 537
            S++L L+H+DVCGPMSS AR  F YFITFTDDFSRYGYVYLMRH            NEVQ
Sbjct: 969  SELLVLVHTDVCGPMSSTARCGFGYFITFTDDFSRYGYVYLMRHKSESFEKFKEFQNEVQ 1028

Query: 538  NQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVR 717
            N   K+IK LRSD GGEYLS +F + LK CGI+ QLTPPGTPQWNGVSERRNRTLL+MVR
Sbjct: 1029 NHLRKTIKYLRSDHGGEYLSLEFGNHLKGCGIVPQLTPPGTPQWNGVSERRNRTLLNMVR 1088

Query: 718  SMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCEAFVK 897
            SMMS  +L +SFWG+ALETAAFTLNRVP+K+V KTPYE+WTGKRPS+SF+KIWGCE +VK
Sbjct: 1089 SMMSQTNLLLSFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEVYVK 1148

Query: 898  RLNSDKLGPKSDKCNFVGYPKETKGYYFYKPSENKV 1005
            RL SDKL PKS+KC FVGYPKETKGYY Y   E KV
Sbjct: 1149 RLQSDKLTPKSNKCFFVGYPKETKGYYLYNREEGKV 1184


>CAE03845.1 OSJNBb0089K06.4 [Oryza sativa Japonica Group]
          Length = 873

 Score =  448 bits (1152), Expect = e-148
 Identities = 213/287 (74%), Positives = 236/287 (82%)
 Frame = +1

Query: 145  YNINTKRFKSNDSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMT 324
            YNIN KR + ND N T++WHCRLGHINEKR+ KLH+DG L SFDFES+E  E CLLGKMT
Sbjct: 216  YNINAKRQRPNDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFETYEFCLLGKMT 275

Query: 325  KAPFTGHSERASDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXX 504
            KAPFTG SER+S++LGL+H DVC PMSS ARG F YFITFTDDFSRY YVYLMRH     
Sbjct: 276  KAPFTGQSERSSELLGLVHIDVCEPMSSTARGGFGYFITFTDDFSRYVYVYLMRHKSESF 335

Query: 505  XXXXXXXNEVQNQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSE 684
                   NEVQN  GK+IK LRSDRGGEYLS +F + LKECGI+ QLTPPGTPQWN VSE
Sbjct: 336  EKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNRVSE 395

Query: 685  RRNRTLLDMVRSMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSF 864
            RRNRTLLDMV+SMMS  DLP+ FWG+ALETAAFTLNRVP+K+V KT YE+WTGKRPS+SF
Sbjct: 396  RRNRTLLDMVQSMMSQTDLPLCFWGYALETAAFTLNRVPSKSVDKTSYEIWTGKRPSLSF 455

Query: 865  MKIWGCEAFVKRLNSDKLGPKSDKCNFVGYPKETKGYYFYKPSENKV 1005
            +KIWGCE +VKRL SDKL PKSDKC FVGYPKETKGYYFY   E KV
Sbjct: 456  LKIWGCEVYVKRLQSDKLTPKSDKCFFVGYPKETKGYYFYNREEGKV 502


>AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] ABA93176.1 retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 938

 Score =  443 bits (1139), Expect = e-145
 Identities = 209/296 (70%), Positives = 242/296 (81%), Gaps = 1/296 (0%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLE-MPIYNINTKRFKSN 177
            +IS SCL  +G+ F   +N CS Y NDI Y  A + NGLYI++L+   +YNIN KR + N
Sbjct: 258  VISASCLQAEGYGFRSVDNGCSVYYNDIFYFHAPMMNGLYIVNLDGCSVYNINAKRQRPN 317

Query: 178  DSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERA 357
            D N T++WHCRLGHINE+R+ KLH+DG L SFDFES+E CESCLLGKMTKAPFTG SE+A
Sbjct: 318  DLNPTFIWHCRLGHINERRMEKLHRDGLLHSFDFESFETCESCLLGKMTKAPFTGQSEKA 377

Query: 358  SDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQ 537
            S++LGL+H+DVCGPMSS ARG F YFITFT+DFSRYGYVYLMRH            NEVQ
Sbjct: 378  SELLGLVHTDVCGPMSSTARGGFGYFITFTNDFSRYGYVYLMRHKSDSFEKFKEFQNEVQ 437

Query: 538  NQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVR 717
            N  GK+IK LRSDRGGEYLS +F + LKECGI+ QLTPPGTPQWNGVSERRNRTLLDMVR
Sbjct: 438  NHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDMVR 497

Query: 718  SMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCE 885
            SMMS  DLP+SFWG+ LETAAFTLNRVP+K+V KTPYE+WTGKRPS+SF+KIWGCE
Sbjct: 498  SMMSQTDLPLSFWGYTLETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCE 553


>ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  444 bits (1142), Expect = e-144
 Identities = 216/318 (67%), Positives = 249/318 (78%), Gaps = 1/318 (0%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLE-MPIYNINTKRFKSN 177
            +IS SCL  +G+ F   +N CS Y NDI Y    + NGLYI++L+   +YNIN KR   N
Sbjct: 425  VISASCLQAEGYGFRSVDNGCSVYYNDIFYFHVPMMNGLYIVNLDGCSVYNINAKRQCPN 484

Query: 178  DSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERA 357
              N T++WHCRLGHINEKR+ KLH+DG L SFDFES++  ESCLLGKMTK PFTG SERA
Sbjct: 485  YLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFKTYESCLLGKMTKGPFTGQSERA 544

Query: 358  SDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQ 537
            S++LGL+H+DVCGPMSS ARG F YFITFTDDFS+YGYVYLMRH            NEVQ
Sbjct: 545  SELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSKYGYVYLMRHKSESFEKFKEFQNEVQ 604

Query: 538  NQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVR 717
            N  GK+IK LRSDRGGEYLS +F +  KECGI+ QLTPPGTPQWN VSERRNRTLLDMVR
Sbjct: 605  NHLGKTIKYLRSDRGGEYLSLEFGNHRKECGIVPQLTPPGTPQWNAVSERRNRTLLDMVR 664

Query: 718  SMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCEAFVK 897
            SMMS  +LP+SF G+ALET AFTLN VP+K+V KTPYE+WTG RPS+SF+KIWG E +VK
Sbjct: 665  SMMSQTNLPLSFSGYALETTAFTLNWVPSKSVDKTPYEIWTGNRPSLSFLKIWGYEVYVK 724

Query: 898  RLNSDKLGPKSDKCNFVG 951
            RL SDKL PKSDKC FVG
Sbjct: 725  RLQSDKLTPKSDKCFFVG 742


>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  441 bits (1134), Expect = e-142
 Identities = 216/336 (64%), Positives = 250/336 (74%), Gaps = 1/336 (0%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLE-MPIYNINTKRFKSN 177
            +IS SCL  +G+ F   +N CS Y NDI Y  A + NGLYI++L+   +YNIN KR + N
Sbjct: 338  VISTSCLQAEGYGFRSVDNGCSVYYNDIFYFHAPMMNGLYIVNLDGCSVYNINAKRQRPN 397

Query: 178  DSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERA 357
            + N T++WHC LGHINEKRI KLH+DG L SFDFES++ CESCLLGKMTKAPFTG SERA
Sbjct: 398  NLNPTFIWHCCLGHINEKRIEKLHRDGLLHSFDFESFKTCESCLLGKMTKAPFTGQSERA 457

Query: 358  SDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQ 537
            S++LGL+H+DVCGPMSS ARG F YFITFTD+FSRYGYVYLMRH            NEVQ
Sbjct: 458  SELLGLVHTDVCGPMSSTARGGFGYFITFTDEFSRYGYVYLMRHKSESFEKFQEFQNEVQ 517

Query: 538  NQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVR 717
            N  GK+IK LRSDRGGEYLS ++ + LKECGI+ QLTPPGTPQWN VSERRNR LLDMVR
Sbjct: 518  NHLGKTIKYLRSDRGGEYLSLEYGNHLKECGIVPQLTPPGTPQWNAVSERRNRILLDMVR 577

Query: 718  SMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCEAFVK 897
            SMMS  D+P+SFWG+ALETAAFTLNRVP+K+V KTPYE+WTGKRPS+SF+KIW CE    
Sbjct: 578  SMMSQTDMPLSFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWCCE---- 633

Query: 898  RLNSDKLGPKSDKCNFVGYPKETKGYYFYKPSENKV 1005
                                 ETKGYYFY   E KV
Sbjct: 634  ---------------------ETKGYYFYNREEGKV 648


>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  434 bits (1115), Expect = e-140
 Identities = 212/331 (64%), Positives = 246/331 (74%), Gaps = 1/331 (0%)
 Frame = +1

Query: 16   CLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLE-MPIYNINTKRFKSNDSNLT 192
            C + +G+ F   +N CS Y NDI Y  A + NGLYI++L+   +YNIN KR + N+ N T
Sbjct: 256  CKETEGYGFRSVDNGCSVYYNDIFYFHAPMMNGLYIVNLDGCSVYNINAKRQRPNNLNPT 315

Query: 193  YLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERASDVLG 372
            ++WHC LGHINEKRI KLH+DG L SFDFES++ CESCLLGKMTKAPFTG SERAS++LG
Sbjct: 316  FIWHCCLGHINEKRIEKLHRDGLLHSFDFESFKTCESCLLGKMTKAPFTGQSERASELLG 375

Query: 373  LIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQNQFGK 552
            L+H+DVCGPMSS ARG F YFITFTD+FSRYGYVYLMRH            NEVQN  GK
Sbjct: 376  LVHTDVCGPMSSTARGGFGYFITFTDEFSRYGYVYLMRHKSESFEKFQEFQNEVQNHLGK 435

Query: 553  SIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVRSMMSH 732
            +IK LRSDRGGEYLS ++ + LKECGI+ QLTPPGTPQWN VSERRNR LLDMVRSMMS 
Sbjct: 436  TIKYLRSDRGGEYLSLEYGNHLKECGIVPQLTPPGTPQWNAVSERRNRILLDMVRSMMSQ 495

Query: 733  ADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCEAFVKRLNSD 912
             D+P+SFWG+ALETAAFTLNRVP+K+V KTPYE+WTGKRPS+SF+KIW CE         
Sbjct: 496  TDMPLSFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWCCE--------- 546

Query: 913  KLGPKSDKCNFVGYPKETKGYYFYKPSENKV 1005
                            ETKGYYFY   E KV
Sbjct: 547  ----------------ETKGYYFYNREEGKV 561


>AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  420 bits (1079), Expect = e-135
 Identities = 210/336 (62%), Positives = 242/336 (72%), Gaps = 1/336 (0%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLE-MPIYNINTKRFKSN 177
            +IS SCL  +G+ F   +N CS Y NDI Y    + NGLYI++L+   +YNIN KR   N
Sbjct: 352  VISASCLQAEGYGFRSVDNGCSVYYNDIFYFHVPMMNGLYIVNLDGCSVYNINAKRQCPN 411

Query: 178  DSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERA 357
              N T++WHCRLGHINEKR+ KLH+DG L SFDFES++  ESCLLGKMTK PFTG SERA
Sbjct: 412  YLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFKTYESCLLGKMTKGPFTGQSERA 471

Query: 358  SDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQ 537
            S++LGL+H+DVCGPMSS ARG F YFITFTDDFS+YGYVYLMRH            NEVQ
Sbjct: 472  SELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSKYGYVYLMRHKSESFEKFKEFQNEVQ 531

Query: 538  NQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVR 717
            N  GK+IK LRSDRGGEYLS +F +  KECGI+ QLTPPGTPQWN VSERRNRTLLDMVR
Sbjct: 532  NHLGKTIKYLRSDRGGEYLSLEFGNHRKECGIVPQLTPPGTPQWNAVSERRNRTLLDMVR 591

Query: 718  SMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCEAFVK 897
            SMMS  +LP+SF G+ALET AFTLN VP+K+V KTPYE+WTG RPS+SF+KIWG E    
Sbjct: 592  SMMSQTNLPLSFSGYALETTAFTLNWVPSKSVDKTPYEIWTGNRPSLSFLKIWGYE---- 647

Query: 898  RLNSDKLGPKSDKCNFVGYPKETKGYYFYKPSENKV 1005
                                 ETKGYYFY   E KV
Sbjct: 648  ---------------------ETKGYYFYNREEGKV 662


>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  424 bits (1091), Expect = e-135
 Identities = 198/291 (68%), Positives = 240/291 (82%), Gaps = 1/291 (0%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLE-MPIYNINTKRFKSN 177
            IIS SCL  +G+ FII+++ CS +LND+ YG A + NGL+IL+L+  PI+NIN KR + N
Sbjct: 461  IISASCLMTEGYKFIIEDHGCSIFLNDMFYGYAPVLNGLFILNLDDAPIFNINAKRLRPN 520

Query: 178  DSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERA 357
            + N T++WHCRLGHI+EKR+ KLH DG L+SFD ES+E CESC+LGKMTK PFTG +ERA
Sbjct: 521  NMNSTFIWHCRLGHISEKRMKKLHDDGILNSFDLESFETCESCILGKMTKTPFTGRNERA 580

Query: 358  SDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQ 537
            SD+L LIH+DVCGPMS+ ARG F YFITFTDD+SRYGY+YLMRH            NEVQ
Sbjct: 581  SDLLALIHTDVCGPMSTTARGGFQYFITFTDDYSRYGYIYLMRHKSESFEKFKEFQNEVQ 640

Query: 538  NQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVR 717
            NQ GK+IK+LRSDRGGE+LSQ+F + LK+CGI+ QLTPP TPQWNGVSER NRTLLDMVR
Sbjct: 641  NQLGKTIKSLRSDRGGEFLSQEFGNHLKQCGIVPQLTPPSTPQWNGVSERCNRTLLDMVR 700

Query: 718  SMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMK 870
             MMS +DLP+ FWG+ALETAAFTLNRVP+K+V KTPYE+WTGK PS+SF+K
Sbjct: 701  LMMSQSDLPLYFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKSPSLSFLK 751


>AAP52343.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 655

 Score =  395 bits (1016), Expect = e-130
 Identities = 190/259 (73%), Positives = 213/259 (82%), Gaps = 2/259 (0%)
 Frame = +1

Query: 235  ISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERASDVLGLIHSDVCGPMSSLA 414
            + KLH+DG L SFDFES+E CESCLLGK+TKAPFTG SERAS++L L+H+DVCGPMSS A
Sbjct: 1    MEKLHRDGLLHSFDFESFETCESCLLGKITKAPFTGQSERASELLRLVHTDVCGPMSSTA 60

Query: 415  RGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQNQFGKSIKALRSDRGGEYL 594
            RG F YFI FTDDFSRYGYVYLMRH            NEVQN   K+IK LRSDRGGEY 
Sbjct: 61   RGGFGYFIIFTDDFSRYGYVYLMRHKSESFEKFKEFHNEVQNHLDKTIKYLRSDRGGEYW 120

Query: 595  SQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHADLPISFWGHALET 774
            S +F + LKECGI+ QLTPPGTPQ NGVS+RRNRTLLDMVRSMMS  DLP+SFWG+ALET
Sbjct: 121  SLEFGNHLKECGIVPQLTPPGTPQLNGVSKRRNRTLLDMVRSMMSQTDLPLSFWGYALET 180

Query: 775  AAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCEAFVKRLNSDKLGP--KSDKCNFV 948
            A FT+NRVP+K++ KTPYE+WTGKRPS+SF+KIWGCE +VKRL SDKL P  KSDKC FV
Sbjct: 181  AVFTVNRVPSKSMDKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSKSDKCFFV 240

Query: 949  GYPKETKGYYFYKPSENKV 1005
            GYPKETKGYYFY   E KV
Sbjct: 241  GYPKETKGYYFYNREEGKV 259


>AAM74249.1 Putative retroelement [Oryza sativa Japonica Group]
          Length = 700

 Score =  395 bits (1016), Expect = e-130
 Identities = 190/259 (73%), Positives = 213/259 (82%), Gaps = 2/259 (0%)
 Frame = +1

Query: 235  ISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERASDVLGLIHSDVCGPMSSLA 414
            + KLH+DG L SFDFES+E CESCLLGK+TKAPFTG SERAS++L L+H+DVCGPMSS A
Sbjct: 1    MEKLHRDGLLHSFDFESFETCESCLLGKITKAPFTGQSERASELLRLVHTDVCGPMSSTA 60

Query: 415  RGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQNQFGKSIKALRSDRGGEYL 594
            RG F YFI FTDDFSRYGYVYLMRH            NEVQN   K+IK LRSDRGGEY 
Sbjct: 61   RGGFGYFIIFTDDFSRYGYVYLMRHKSESFEKFKEFHNEVQNHLDKTIKYLRSDRGGEYW 120

Query: 595  SQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHADLPISFWGHALET 774
            S +F + LKECGI+ QLTPPGTPQ NGVS+RRNRTLLDMVRSMMS  DLP+SFWG+ALET
Sbjct: 121  SLEFGNHLKECGIVPQLTPPGTPQLNGVSKRRNRTLLDMVRSMMSQTDLPLSFWGYALET 180

Query: 775  AAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCEAFVKRLNSDKLGP--KSDKCNFV 948
            A FT+NRVP+K++ KTPYE+WTGKRPS+SF+KIWGCE +VKRL SDKL P  KSDKC FV
Sbjct: 181  AVFTVNRVPSKSMDKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSKSDKCFFV 240

Query: 949  GYPKETKGYYFYKPSENKV 1005
            GYPKETKGYYFY   E KV
Sbjct: 241  GYPKETKGYYFYNREEGKV 259


>ABA97705.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 810

 Score =  389 bits (999), Expect = e-126
 Identities = 190/288 (65%), Positives = 217/288 (75%)
 Frame = +1

Query: 142  IYNINTKRFKSNDSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKM 321
            +YNIN KR + ND N T+ WHCRLGHINEKR+ KL++DG L SFDFES+E CESCLLGKM
Sbjct: 130  VYNINAKRQRPNDLNPTFSWHCRLGHINEKRMEKLYRDGLLHSFDFESFETCESCLLGKM 189

Query: 322  TKAPFTGHSERASDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXX 501
            TKAPFT  SE AS++L L+++DVCG MSS ARG F YFITFT DFSRYGYVYLMR     
Sbjct: 190  TKAPFTSQSEWASELLALVYTDVCGLMSSTARGDFGYFITFTGDFSRYGYVYLMRQKSET 249

Query: 502  XXXXXXXXNEVQNQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVS 681
                    NEVQN  GK+IK LRSDRGG+YLS +F + LKEC I+ QLT PGTPQWNGVS
Sbjct: 250  FEKFKEFQNEVQNHLGKTIKYLRSDRGGKYLSLEFGNHLKECRIVPQLTLPGTPQWNGVS 309

Query: 682  ERRNRTLLDMVRSMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMS 861
            ERRNRTLLDM+  + S                AFT+N+VP+K+V K PYE+WTGKRPS+S
Sbjct: 310  ERRNRTLLDMLLGLRS-------------RDTAFTINKVPSKSVDKIPYEIWTGKRPSLS 356

Query: 862  FMKIWGCEAFVKRLNSDKLGPKSDKCNFVGYPKETKGYYFYKPSENKV 1005
            F+KIWGCE +VKRL SDKL PKSDKC FVGY KETKGYYFY   E KV
Sbjct: 357  FLKIWGCEVYVKRLQSDKLTPKSDKCFFVGYHKETKGYYFYNREEGKV 404


>KYP42262.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 656

 Score =  377 bits (969), Expect = e-123
 Identities = 183/314 (58%), Positives = 232/314 (73%), Gaps = 3/314 (0%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYIL-DLEM-PIYNI-NTKRFK 171
            IIS+S LDK GF  I  NN CS Y  D  Y    L +G+Y+L D+ + P+ ++ N KR +
Sbjct: 297  IISISMLDKHGFLTIFNNNICSIYRGDDLYVNGYLQHGIYVLPDVNLNPVMHVSNVKRKR 356

Query: 172  SNDSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSE 351
             +  N TYLWHCRLGHI EKRI+KLHK+G+LD +D+ESY  CESCL GKMTK+PFTG  E
Sbjct: 357  DDQVNKTYLWHCRLGHIGEKRINKLHKEGYLDQYDYESYTTCESCLKGKMTKSPFTGKGE 416

Query: 352  RASDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNE 531
            RAS++LGLIH+DVCGPM   A+G + YFITFTDD SRYG+VYLM+H            +E
Sbjct: 417  RASELLGLIHTDVCGPMKIQAKGGYSYFITFTDDMSRYGFVYLMKHKSESFEMFKRFRSE 476

Query: 532  VQNQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDM 711
            V+ Q GK++K LRSDRGGEYLS DF D LKE GI+SQ  PPGTPQ NGVSERRNRTLLDM
Sbjct: 477  VEKQTGKNVKVLRSDRGGEYLSNDFLDHLKENGILSQWKPPGTPQHNGVSERRNRTLLDM 536

Query: 712  VRSMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCEAF 891
            V+SMM   DLPI+ WG+ALE++A+ LN+VPTK++  TPYE+W G++P++  +K+WGC A 
Sbjct: 537  VKSMMGFTDLPINLWGYALESSAYLLNKVPTKSLSTTPYEIWKGRKPNLKHIKVWGCHAL 596

Query: 892  VKRLNSDKLGPKSD 933
            ++  N  ++  K D
Sbjct: 597  LR--NCKQINLKQD 608


>AMY96445.1 gag/pol protein [Momordica dioica]
          Length = 1313

 Score =  383 bits (984), Expect = e-119
 Identities = 191/343 (55%), Positives = 236/343 (68%), Gaps = 8/343 (2%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLEMP--------IYNIN 156
            +IS++C+ +  ++   + N        I    A +  G Y L             I+N+ 
Sbjct: 378  LISIACILEHIYTISFEVNEVFILCKGIQICHAPIVRGFYKLRPTRANVVLNTTHIHNLE 437

Query: 157  TKRFKSNDSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPF 336
            T+  K N+ +  YLWH RLGHIN  RI KLHKDG L+  +  S   CESCL GKMTK PF
Sbjct: 438  TQNKKQNNDSAMYLWHLRLGHINLNRIEKLHKDGLLEQLEDFSLPPCESCLEGKMTKRPF 497

Query: 337  TGHSERASDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXX 516
            TG   RASD+L LIH+DVCGPMS  ARG + YF++FTDD SRYGYVYL++H         
Sbjct: 498  TGKGLRASDLLELIHTDVCGPMSVKARGGYQYFLSFTDDLSRYGYVYLLKHKSESFEKFK 557

Query: 517  XXXNEVQNQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNR 696
                EV+N+ GK IK LRSDRGGEY+S +F D L+E GI+SQL+ PGTPQ NGVSERRNR
Sbjct: 558  EFQAEVENEIGKKIKTLRSDRGGEYMSSEFGDHLREFGIVSQLSAPGTPQCNGVSERRNR 617

Query: 697  TLLDMVRSMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIW 876
            TLLDMVRSMMS+ADLP SFWG+A E     LNRVP+K+V++TPYE+W G++ S+SF+KIW
Sbjct: 618  TLLDMVRSMMSYADLPDSFWGYARERERAILNRVPSKSVEETPYELWYGRKSSLSFLKIW 677

Query: 877  GCEAFVKRLNSDKLGPKSDKCNFVGYPKETKGYYFYKPSENKV 1005
            GC A VK+L   KL P+S+KC FVGYPKET+GYYFY P ENKV
Sbjct: 678  GCPAHVKKLQPKKLEPRSEKCLFVGYPKETRGYYFYHPQENKV 720


>EXX50149.1 gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
          Length = 1303

 Score =  372 bits (954), Expect = e-115
 Identities = 189/342 (55%), Positives = 239/342 (69%), Gaps = 7/342 (2%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNN--RCSFYLNDICYGVAQLFNGLY-----ILDLEMPIYNINT 159
            IIS   L ++GF F   NN    S + N I    A   +G+Y     + +L   +  I++
Sbjct: 346  IISFHALFRQGFHFSFDNNIGSISVFKNGILNFTAYPCDGVYETVECVDNLGHSVNYIDS 405

Query: 160  KRFKSNDSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFT 339
                ++      LWH RLGHI++KRI++L KDG L+SFD +S + CESCLLGKMTK+PF 
Sbjct: 406  ----TSGVEKACLWHSRLGHISKKRIAQLQKDGVLESFDLKSDDVCESCLLGKMTKSPFK 461

Query: 340  GHSERASDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXX 519
            G  ER   +L +IH+DVCGP  S  +    +++TFTDDFSRYGY+YL++H          
Sbjct: 462  GSFERGEGLLDIIHTDVCGPFRSTTKDGTRFYVTFTDDFSRYGYIYLIKHKSDTFEKFKE 521

Query: 520  XXNEVQNQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRT 699
              NEV+NQ G+ IK LRSDRGGEYLS +F D LKECGI+SQLTPP TPQ NGV+ERRNRT
Sbjct: 522  FKNEVENQLGRKIKMLRSDRGGEYLSIEFLDYLKECGIVSQLTPPRTPQLNGVAERRNRT 581

Query: 700  LLDMVRSMMSHADLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWG 879
            LLDMVRSMMS A LPI FWG+ALETAA  LN VPTK V KTP+EMWTGK PS++ +K+WG
Sbjct: 582  LLDMVRSMMSRASLPIHFWGYALETAAHILNLVPTKKVAKTPHEMWTGKVPSLAHIKVWG 641

Query: 880  CEAFVKRLNSDKLGPKSDKCNFVGYPKETKGYYFYKPSENKV 1005
            CEAFV+R   DKL  +S++C F+GYPK++ GY FY+PSE+ V
Sbjct: 642  CEAFVRRETQDKLAERSERCFFLGYPKQSFGYLFYRPSEDVV 683


>KZV20448.1 retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Dorcoceras hygrometricum]
          Length = 444

 Score =  330 bits (846), Expect = e-107
 Identities = 161/270 (59%), Positives = 189/270 (70%)
 Frame = +1

Query: 196  LWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERASDVLGL 375
            LWH RLGH++  R++KL +    D  D  S   CESCL GK+TK PF G  ERA D+L L
Sbjct: 1    LWHARLGHVSLSRMNKLVRSDLFDLSDINSLPTCESCLKGKITKHPFKGKGERAQDLLDL 60

Query: 376  IHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQNQFGKS 555
            IH+DVCG  S   +    YFITFTDD+SRYGY+YLM++             +V+NQ GKS
Sbjct: 61   IHTDVCGLFSIGTKYGHTYFITFTDDYSRYGYLYLMKYKSESFERFKEFKAKVENQLGKS 120

Query: 556  IKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHA 735
            IKALRSDRGGEYLS +F D L+E GI+SQ TPP TPQ NGV+ERRNRT  DMVRSMMS  
Sbjct: 121  IKALRSDRGGEYLSAEFQDYLRENGILSQWTPPATPQLNGVAERRNRTFFDMVRSMMSFT 180

Query: 736  DLPISFWGHALETAAFTLNRVPTKTVQKTPYEMWTGKRPSMSFMKIWGCEAFVKRLNSDK 915
            +LP SFWG+ALETA   LN V TK V KTPYE+W GK P  SFM+IWGC A+VK+   DK
Sbjct: 181  ELPTSFWGYALETAVMLLNNVHTKAVDKTPYEIWMGKPPKYSFMRIWGCPAYVKQTVGDK 240

Query: 916  LGPKSDKCNFVGYPKETKGYYFYKPSENKV 1005
            L  +S  C F+GYPK + GYYFY PSE KV
Sbjct: 241  LDTRSILCYFIGYPKNSIGYYFYYPSETKV 270


>AAR06328.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  333 bits (855), Expect = e-102
 Identities = 161/239 (67%), Positives = 186/239 (77%), Gaps = 1/239 (0%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLE-MPIYNINTKRFKSN 177
            +IS SCL  +G+ F   +N CS Y ND+ Y  A + NGLYI++L+   +YNIN KR   N
Sbjct: 465  VISASCLQAEGYGFRSMDNGCSVYYNDLFYFHAPMMNGLYIVNLDGCSVYNINAKRQHPN 524

Query: 178  DSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERA 357
            D N T++WHCRLGHINEKR+ KLH+DG L SFDFES+E CESCLLGKMTKAPFTG S+RA
Sbjct: 525  DLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFETCESCLLGKMTKAPFTGQSKRA 584

Query: 358  SDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQ 537
            S++LGL+H+DVCGPMSS ARG F YFITFTDDFSR GYVYLMRH            NE Q
Sbjct: 585  SELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSRCGYVYLMRHKSESVEKFKKFQNEEQ 644

Query: 538  NQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMV 714
            N  GK+IK LRSDRGGEYLS +F + LKECGI+ QLTPPGTPQWNGVSERRNRTLLDM+
Sbjct: 645  NYLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDML 703


>ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1073

 Score =  333 bits (855), Expect = e-102
 Identities = 161/239 (67%), Positives = 186/239 (77%), Gaps = 1/239 (0%)
 Frame = +1

Query: 1    IISVSCLDKKGFSFIIKNNRCSFYLNDICYGVAQLFNGLYILDLE-MPIYNINTKRFKSN 177
            +IS SCL  +G+ F   +N CS Y ND+ Y  A + NGLYI++L+   +YNIN KR   N
Sbjct: 465  VISASCLQAEGYGFRSMDNGCSVYYNDLFYFHAPMMNGLYIVNLDGCSVYNINAKRQHPN 524

Query: 178  DSNLTYLWHCRLGHINEKRISKLHKDGFLDSFDFESYEKCESCLLGKMTKAPFTGHSERA 357
            D N T++WHCRLGHINEKR+ KLH+DG L SFDFES+E CESCLLGKMTKAPFTG S+RA
Sbjct: 525  DLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFETCESCLLGKMTKAPFTGQSKRA 584

Query: 358  SDVLGLIHSDVCGPMSSLARGRFYYFITFTDDFSRYGYVYLMRHXXXXXXXXXXXXNEVQ 537
            S++LGL+H+DVCGPMSS ARG F YFITFTDDFSR GYVYLMRH            NE Q
Sbjct: 585  SELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSRCGYVYLMRHKSESVEKFKKFQNEEQ 644

Query: 538  NQFGKSIKALRSDRGGEYLSQDFDDLLKECGIISQLTPPGTPQWNGVSERRNRTLLDMV 714
            N  GK+IK LRSDRGGEYLS +F + LKECGI+ QLTPPGTPQWNGVSERRNRTLLDM+
Sbjct: 645  NYLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDML 703