BLASTX nr result

ID: Panax25_contig00042843 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00042843
         (501 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDP06953.1 unnamed protein product [Coffea canephora]                  72   1e-11
XP_002269920.2 PREDICTED: DNA polymerase epsilon catalytic subun...    70   4e-11
CBI17056.3 unnamed protein product, partial [Vitis vinifera]           70   4e-11
XP_015873463.1 PREDICTED: DNA polymerase epsilon catalytic subun...    70   6e-11
XP_006384633.1 DNA-directed DNA polymerase epsilon catalytic sub...    70   8e-11
XP_011046263.1 PREDICTED: LOW QUALITY PROTEIN: DNA polymerase ep...    70   8e-11
KZM94429.1 hypothetical protein DCAR_017672 [Daucus carota subsp...    64   1e-10
KDP34715.1 hypothetical protein JCGZ_10920 [Jatropha curcas]           69   1e-10
XP_012075886.1 PREDICTED: DNA polymerase epsilon catalytic subun...    69   1e-10
GAV76364.1 LOW QUALITY PROTEIN: DNA_pol_B domain-containing prot...    69   2e-10
XP_019453891.1 PREDICTED: DNA polymerase epsilon catalytic subun...    69   2e-10
KHG07913.1 DNA polymerase epsilon catalytic subunit A [Gossypium...    69   2e-10
XP_017607285.1 PREDICTED: DNA polymerase epsilon catalytic subun...    69   2e-10
XP_016750910.1 PREDICTED: DNA polymerase epsilon catalytic subun...    69   2e-10
XP_015951709.1 PREDICTED: DNA polymerase epsilon catalytic subun...    69   2e-10
XP_016187564.1 PREDICTED: DNA polymerase epsilon catalytic subun...    69   2e-10
XP_018844516.1 PREDICTED: DNA polymerase epsilon catalytic subun...    69   2e-10
XP_006349108.1 PREDICTED: DNA polymerase epsilon catalytic subun...    69   2e-10
XP_002529065.1 PREDICTED: DNA polymerase epsilon catalytic subun...    69   2e-10
XP_017607284.1 PREDICTED: DNA polymerase epsilon catalytic subun...    69   2e-10

>CDP06953.1 unnamed protein product [Coffea canephora]
          Length = 2321

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 34/42 (80%), Positives = 36/42 (85%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEIS 128
            GSFRC E V EFRN+MQVFL IA  QKFQLLQECTSWILE+S
Sbjct: 2277 GSFRCKEDVSEFRNKMQVFLNIAQDQKFQLLQECTSWILEVS 2318


>XP_002269920.2 PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 33/41 (80%), Positives = 37/41 (90%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
            GSFRC E V EF+++MQVFLKIA+ QKFQLLQECTSWILEI
Sbjct: 2173 GSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQECTSWILEI 2213


>CBI17056.3 unnamed protein product, partial [Vitis vinifera]
          Length = 2723

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 33/41 (80%), Positives = 37/41 (90%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
            GSFRC E V EF+++MQVFLKIA+ QKFQLLQECTSWILEI
Sbjct: 2682 GSFRCKEDVSEFQSKMQVFLKIAMLQKFQLLQECTSWILEI 2722


>XP_015873463.1 PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Ziziphus
            jujuba]
          Length = 2202

 Score = 70.1 bits (170), Expect = 6e-11
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
            GS+RC E V EF N+M++FL +A+QQKFQLLQECTSWILEI
Sbjct: 2161 GSYRCKEDVSEFHNKMRIFLNVAVQQKFQLLQECTSWILEI 2201


>XP_006384633.1 DNA-directed DNA polymerase epsilon catalytic subunit family protein
            [Populus trichocarpa] ERP62430.1 DNA-directed DNA
            polymerase epsilon catalytic subunit family protein
            [Populus trichocarpa]
          Length = 2160

 Score = 69.7 bits (169), Expect = 8e-11
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
            GS+RC E V EFR +MQ+FL +AI+QKFQLLQECTSWILE+
Sbjct: 2118 GSYRCREDVSEFRRKMQIFLNVAIRQKFQLLQECTSWILEV 2158


>XP_011046263.1 PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
            subunit A-like [Populus euphratica]
          Length = 2161

 Score = 69.7 bits (169), Expect = 8e-11
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
            GS+RC E V EFR +MQ+FL +AI+QKFQLLQECTSWILE+
Sbjct: 2119 GSYRCREDVSEFRRKMQIFLNVAIRQKFQLLQECTSWILEV 2159


>KZM94429.1 hypothetical protein DCAR_017672 [Daucus carota subsp. sativus]
          Length = 83

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +3

Query: 3   GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
           GSFRC EV PEFR++M+V  KIA  QKFQLLQECTS ILE+
Sbjct: 42  GSFRCKEVFPEFRSKMEVLFKIAKHQKFQLLQECTSRILEV 82


>KDP34715.1 hypothetical protein JCGZ_10920 [Jatropha curcas]
          Length = 1142

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
            GS+RC E V EFR +MQ+FL +AI QKFQLLQECTSWILE+
Sbjct: 1101 GSYRCKEDVSEFRRKMQIFLNVAIHQKFQLLQECTSWILEV 1141


>XP_012075886.1 PREDICTED: DNA polymerase epsilon catalytic subunit A [Jatropha
            curcas]
          Length = 2219

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
            GS+RC E V EFR +MQ+FL +AI QKFQLLQECTSWILE+
Sbjct: 2178 GSYRCKEDVSEFRRKMQIFLNVAIHQKFQLLQECTSWILEV 2218


>GAV76364.1 LOW QUALITY PROTEIN: DNA_pol_B domain-containing
            protein/DNA_pol_B_exo1 domain-containing protein/DUF1744
            domain-containing protein [Cephalotus follicularis]
          Length = 2218

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
            GSFRC E   EFR++MQ+FL IAIQQ+FQLLQ+CTSWILE+
Sbjct: 2177 GSFRCREDASEFRSKMQIFLNIAIQQEFQLLQQCTSWILEV 2217


>XP_019453891.1 PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Lupinus
            angustifolius]
          Length = 2219

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILE 122
            GSFRC E V EFR++MQVFL +AI+QKFQLLQECTSWIL+
Sbjct: 2179 GSFRCKEGVSEFRSKMQVFLNVAIRQKFQLLQECTSWILK 2218


>KHG07913.1 DNA polymerase epsilon catalytic subunit A [Gossypium arboreum]
          Length = 905

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEIS 128
           GSF+C E V EFR++MQ+FL IAI++KFQLLQECTSWIL+I+
Sbjct: 864 GSFKCKEDVSEFRSKMQIFLNIAIRKKFQLLQECTSWILQIN 905


>XP_017607285.1 PREDICTED: DNA polymerase epsilon catalytic subunit A-like isoform X2
            [Gossypium arboreum]
          Length = 2204

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEIS 128
            GSF+C E V EFR++MQ+FL IAI++KFQLLQECTSWIL+I+
Sbjct: 2163 GSFKCKEDVSEFRSKMQIFLNIAIRKKFQLLQECTSWILQIN 2204


>XP_016750910.1 PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Gossypium
            hirsutum]
          Length = 2204

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEIS 128
            GSF+C E V EFR++MQ+FL IAI++KFQLLQECTSWIL+I+
Sbjct: 2163 GSFKCKEDVSEFRSKMQIFLNIAIRKKFQLLQECTSWILQIN 2204


>XP_015951709.1 PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Arachis
            duranensis]
          Length = 2205

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
            GSFRC E V EFR++MQVF  IA +QKFQLLQECTSWILE+
Sbjct: 2163 GSFRCKEDVTEFRSKMQVFFNIAFRQKFQLLQECTSWILEL 2203


>XP_016187564.1 PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Arachis
            ipaensis]
          Length = 2207

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
            GSFRC E V EFR++MQVF  IA +QKFQLLQECTSWILE+
Sbjct: 2165 GSFRCKEDVTEFRSKMQVFFNIAFRQKFQLLQECTSWILEL 2205


>XP_018844516.1 PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Juglans
            regia]
          Length = 2218

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
            GSFRC E + +FR++MQ+FL IAI QKFQLLQECTSWILE+
Sbjct: 2177 GSFRCKEDLKDFRSKMQIFLNIAIHQKFQLLQECTSWILEL 2217


>XP_006349108.1 PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Solanum
            tuberosum]
          Length = 2218

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILE 122
            GSF C E V +FRN+MQVFL IA+ QKFQLLQECTSWILE
Sbjct: 2177 GSFSCKEDVSDFRNKMQVFLNIAVNQKFQLLQECTSWILE 2216


>XP_002529065.1 PREDICTED: DNA polymerase epsilon catalytic subunit A [Ricinus
            communis] EEF33309.1 DNA polymerase epsilon, catalytic
            subunit, putative [Ricinus communis]
          Length = 2227

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEI 125
            G++RC E V EFR++MQ+FL +AI QKFQLLQECTSWILE+
Sbjct: 2186 GAYRCKEDVSEFRSKMQIFLNVAISQKFQLLQECTSWILEV 2226


>XP_017607284.1 PREDICTED: DNA polymerase epsilon catalytic subunit A-like isoform X1
            [Gossypium arboreum]
          Length = 2235

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = +3

Query: 3    GSFRCNEVVPEFRNRMQVFLKIAIQQKFQLLQECTSWILEIS 128
            GSF+C E V EFR++MQ+FL IAI++KFQLLQECTSWIL+I+
Sbjct: 2194 GSFKCKEDVSEFRSKMQIFLNIAIRKKFQLLQECTSWILQIN 2235


Top