BLASTX nr result

ID: Panax25_contig00042749 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00042749
         (423 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ACS74199.1 putative gag-pol polyprotein [Fragaria x ananassa]         177   1e-48
JAU16310.1 Retrovirus-related Pol polyprotein from transposon TN...   166   3e-45
CAN60570.1 hypothetical protein VITISV_000227 [Vitis vinifera]        162   3e-44
AOZ57162.1 integrase, partial [Coccinia grandis]                      153   4e-44
CAN65222.1 hypothetical protein VITISV_038665 [Vitis vinifera]        163   7e-44
CAN61272.1 hypothetical protein VITISV_039063 [Vitis vinifera]        163   7e-44
KOM57411.1 hypothetical protein LR48_Vigan11g044400 [Vigna angul...   150   1e-43
OMO83367.1 Integrase, catalytic core [Corchorus capsularis]           160   3e-43
OMO73383.1 Integrase, catalytic core [Corchorus capsularis]           160   5e-43
KYP38864.1 Retrovirus-related Pol polyprotein from transposon TN...   157   6e-43
KYP50611.1 Retrovirus-related Pol polyprotein from transposon TN...   155   9e-43
ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop...   158   3e-42
ACL97384.1 Gag-Pol polyprotein [Medicago truncatula]                  157   5e-42
KYP40337.1 Retrovirus-related Pol polyprotein from transposon TN...   157   7e-42
KOM25686.1 hypothetical protein LR48_Vigan153s000800 [Vigna angu...   152   2e-41
ACL97387.1 Gag-Pol polyprotein [Lotus japonicus]                      155   3e-41
KYP40338.1 Retrovirus-related Pol polyprotein from transposon TN...   155   3e-41
KYP59920.1 Retrovirus-related Pol polyprotein from transposon TN...   146   4e-41
ACL97383.1 Gag-Pol polyprotein [Medicago truncatula]                  154   9e-41
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN...   153   1e-40

>ACS74199.1 putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  177 bits (448), Expect = 1e-48
 Identities = 78/131 (59%), Positives = 103/131 (78%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K+WK ++ N TG+K+K   SDN  EY+D  FLQ C DEGITR+F+VK++ +QNGVA+RMN
Sbjct: 502 KEWKAEVGNQTGRKIKCLRSDNGGEYRDKKFLQLCKDEGITRHFTVKKSPQQNGVAERMN 561

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           RTL+E+ + M+ +AGLP+ FW EA N  CYLINRSPS  I++K  EEVWSGKPVD+S ++
Sbjct: 562 RTLMEKERSMRFHAGLPEEFWAEAANHACYLINRSPSRAINFKCAEEVWSGKPVDYSNLR 621

Query: 385 IFGCPAYVHLP 417
           +FGC AY H+P
Sbjct: 622 VFGCSAYAHIP 632


>JAU16310.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Noccaea caerulescens]
          Length = 825

 Score =  166 bits (421), Expect = 3e-45
 Identities = 72/131 (54%), Positives = 102/131 (77%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K WK ++EN T +K+KY  SDN TEY D  F++FC + GI R+++V++T +QNGV++RMN
Sbjct: 544 KIWKAEVENQTERKVKYLRSDNGTEYTDGKFVKFCEEHGIQRHYTVRKTPQQNGVSERMN 603

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           RT+ E+A+C++LNAGLPK FW EA+N   YLINRSP + ++ K+ EEVW+G  +D S +K
Sbjct: 604 RTIAEKARCLRLNAGLPKQFWTEAVNMAVYLINRSPRSSLEGKVAEEVWTGVDIDLSNLK 663

Query: 385 IFGCPAYVHLP 417
           IFGCPAY+ +P
Sbjct: 664 IFGCPAYMLIP 674


>CAN60570.1 hypothetical protein VITISV_000227 [Vitis vinifera]
          Length = 605

 Score =  162 bits (409), Expect = 3e-44
 Identities = 72/133 (54%), Positives = 94/133 (70%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K WK ++EN TG+K+K   SDN TEY D  F + C   GI R+F V++T +QN VA+ MN
Sbjct: 39  KLWKTEVENQTGRKIKCLRSDNGTEYTDSKFTELCEQHGIKRHFIVRKTPQQNNVAEMMN 98

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
            T+ ER +C+KLN GL   FWVEA+N  CYLINRSP A +  K+ +EVW G PVD+S ++
Sbjct: 99  ITIAERTQCLKLNVGLENKFWVEAVNMACYLINRSPRATLHGKVVDEVWIGSPVDYSSLR 158

Query: 385 IFGCPAYVHLPVE 423
           +FGCP YVH+P E
Sbjct: 159 LFGCPTYVHIPNE 171


>AOZ57162.1 integrase, partial [Coccinia grandis]
          Length = 226

 Score =  153 bits (386), Expect = 4e-44
 Identities = 72/120 (60%), Positives = 88/120 (73%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           KQWK  IEN TGKK+K   +DN  E+    F +FC  EGI R+ +V+ T +QNGVA+RMN
Sbjct: 107 KQWKTLIENQTGKKIKRLRTDNGLEFCGSEFNEFCKAEGIVRHHTVRDTPQQNGVAERMN 166

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           +TLLERA+CM  NAGL + FW EA+NT CYLINR P  GID K P EVWSGKP D+S++K
Sbjct: 167 QTLLERARCMLSNAGLSRRFWAEAVNTACYLINRGPHTGIDCKTPYEVWSGKPADYSILK 226


>CAN65222.1 hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  163 bits (412), Expect = 7e-44
 Identities = 72/130 (55%), Positives = 99/130 (76%)
 Frame = +1

Query: 25   KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
            K+WK  +E  TGK +K   +DN  E+ +  F +FC  EGI R+ +V+ T +QNGVA+RMN
Sbjct: 640  KEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMN 699

Query: 205  RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
            +TL++RA+CM+++AGL K FW EA+NT  YL+NRSPS  ID+K P+EVWSGKP ++S +K
Sbjct: 700  QTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLK 759

Query: 385  IFGCPAYVHL 414
            IFGCPAY H+
Sbjct: 760  IFGCPAYAHV 769


>CAN61272.1 hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  163 bits (412), Expect = 7e-44
 Identities = 72/130 (55%), Positives = 99/130 (76%)
 Frame = +1

Query: 25   KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
            K+WK  +E  TGK +K   +DN  E+ +  F +FC  EGI R+ +V+ T +QNGVA+RMN
Sbjct: 853  KEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMN 912

Query: 205  RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
            +TL++RA+CM+++AGL K FW EA+NT  YL+NRSPS  ID+K P+EVWSGKP ++S +K
Sbjct: 913  QTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLK 972

Query: 385  IFGCPAYVHL 414
            IFGCPAY H+
Sbjct: 973  IFGCPAYAHV 982


>KOM57411.1 hypothetical protein LR48_Vigan11g044400 [Vigna angularis]
          Length = 179

 Score =  150 bits (379), Expect = 1e-43
 Identities = 71/124 (57%), Positives = 89/124 (71%)
 Frame = +1

Query: 43  IEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMNRTLLER 222
           +EN TG K+K   SDN  EY D  F +FC + GI    +V  T + NGVA+RMNRTL ER
Sbjct: 2   VENETGLKIKKLRSDNGGEYVDTRFKKFCYEHGIRMERTVPSTPQHNGVAERMNRTLTER 61

Query: 223 AKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMKIFGCPA 402
           AK M++ +GLPK FW EA+NT  YLINRSPS  +++KIPEEVWSGK V  S +++FGC A
Sbjct: 62  AKSMRVQSGLPKQFWAEAVNTAAYLINRSPSVPLEHKIPEEVWSGKEVKLSHLRVFGCVA 121

Query: 403 YVHL 414
           YVH+
Sbjct: 122 YVHI 125


>OMO83367.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 785

 Score =  160 bits (406), Expect = 3e-43
 Identities = 71/130 (54%), Positives = 98/130 (75%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K+WK+ IE  T +++K   +DN  E+    F +FC  EGI R+ +V+RT +QNGVA+RMN
Sbjct: 507 KEWKIMIEKHTSRQIKTLRTDNGLEFCGQEFNEFCKKEGILRHHTVRRTPQQNGVAERMN 566

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           +TLL+RA+C++LNAGL K FW EA+NTT YL+NRSPS  ID K P+++W  KP D+S ++
Sbjct: 567 QTLLQRARCIRLNAGLSKKFWAEAVNTTAYLVNRSPSTAIDLKTPQDLWYDKPSDYSGLR 626

Query: 385 IFGCPAYVHL 414
           IFGCPAY H+
Sbjct: 627 IFGCPAYAHV 636


>OMO73383.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 1212

 Score =  160 bits (406), Expect = 5e-43
 Identities = 72/130 (55%), Positives = 96/130 (73%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K+WK+ IE  T +++K   +DN  E+    F +FC  EGI R+ +V+RT +QNGVA+RMN
Sbjct: 455 KEWKIMIEKRTSRQIKTLRTDNGLEFCGQGFNEFCKKEGIVRHHTVRRTPQQNGVAERMN 514

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           +T+L+RA+CM+LNAGL K FW EA+N   YL NRSPS  ID K P+EVW  KP D+S ++
Sbjct: 515 QTVLQRARCMRLNAGLSKKFWAEAVNIAAYLANRSPSTAIDLKTPQEVWYDKPSDYSALR 574

Query: 385 IFGCPAYVHL 414
           IFGCPAYVH+
Sbjct: 575 IFGCPAYVHV 584


>KYP38864.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 507

 Score =  157 bits (396), Expect = 6e-43
 Identities = 71/130 (54%), Positives = 96/130 (73%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K+WK+ +E  T K++K   +DN  E+    F  +C  EGI R ++V+ T +QNGVA+RMN
Sbjct: 152 KEWKILMEKQTSKRVKRLRTDNGLEFCSKEFNDYCKAEGIARQYTVRNTPQQNGVAERMN 211

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           RTLLERA+C+  NAGL +SFW EA++TTCYLINRSPS  ID K P EVWS KP ++S+++
Sbjct: 212 RTLLERARCLLSNAGLSRSFWAEAVSTTCYLINRSPSTIIDCKTPIEVWSNKPANYSLLR 271

Query: 385 IFGCPAYVHL 414
           +FGC AY H+
Sbjct: 272 VFGCNAYYHV 281


>KYP50611.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 448

 Score =  155 bits (392), Expect = 9e-43
 Identities = 71/130 (54%), Positives = 95/130 (73%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K+WK+ +E    K++K   +DN  E+    F  FC  EGI R ++V+ T +QNGVA+RMN
Sbjct: 293 KEWKILMEKQISKRVKRLRTDNGLEFCSKEFNDFCKAEGIARQYTVRNTPQQNGVAERMN 352

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           +TLLERA+C+  NAGL +SFW EAI+TTCYLINRSPS  ID K P EVWS KP ++S+++
Sbjct: 353 KTLLERARCLLSNAGLSRSFWAEAISTTCYLINRSPSTVIDCKTPIEVWSNKPANYSLLR 412

Query: 385 IFGCPAYVHL 414
           +FGC AY H+
Sbjct: 413 VFGCNAYYHV 422


>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
           [Solanum lycopersicum]
          Length = 1307

 Score =  158 bits (400), Expect = 3e-42
 Identities = 74/130 (56%), Positives = 94/130 (72%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K+WK+ +EN TGKK+K   +DN  E+    F QFC DEGI R+ +V+ T +QNGVA+RMN
Sbjct: 519 KEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMN 578

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           +TLLERA+CM  NAGL + FW EA++T CYLINR P  GI  K P E+WSGK  D+S +K
Sbjct: 579 QTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLK 638

Query: 385 IFGCPAYVHL 414
            FGC AY H+
Sbjct: 639 AFGCTAYYHV 648


>ACL97384.1 Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  157 bits (398), Expect = 5e-42
 Identities = 75/128 (58%), Positives = 90/128 (70%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K +K +IE  TGKK+K   +DN  EY D  FL FC  EGI R F+V  T +QNGVA+RMN
Sbjct: 530 KAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMN 589

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           RTLLER + M   AG+ KSFW EA+ T CY+INRSPS  ID K P E+W GKPVD+S + 
Sbjct: 590 RTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLH 649

Query: 385 IFGCPAYV 408
           +FGCP YV
Sbjct: 650 VFGCPVYV 657


>KYP40337.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1269

 Score =  157 bits (397), Expect = 7e-42
 Identities = 72/130 (55%), Positives = 93/130 (71%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K WK  +EN TG K+K   +DN  EY+D  F +FC + GI    +V  T +QNGVA+RMN
Sbjct: 497 KMWKAMVENETGLKIKKLRTDNGGEYEDTRFKRFCYEHGIRMERTVPGTPQQNGVAERMN 556

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           RTL ERA+ M++ +GLPK FW EA+NT  YLINR PS  +++KIPEEVWSGK V  S ++
Sbjct: 557 RTLTERARSMRMQSGLPKQFWAEAVNTAAYLINRGPSVPLEHKIPEEVWSGKEVKLSHLR 616

Query: 385 IFGCPAYVHL 414
           +FGC AYVH+
Sbjct: 617 VFGCVAYVHI 626


>KOM25686.1 hypothetical protein LR48_Vigan153s000800 [Vigna angularis]
          Length = 473

 Score =  152 bits (384), Expect = 2e-41
 Identities = 72/128 (56%), Positives = 87/128 (67%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K++K ++E  TGK +K   +DN  EY D  FL FC  EGI R F+V  T +QNGVA+RMN
Sbjct: 142 KEFKAQVELETGKMIKCLRTDNGGEYTDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMN 201

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           RTLLER + M    GL KSFW EA+ T CYLINRSPS  I  K P E+W GKP D+S + 
Sbjct: 202 RTLLERTRAMLKTTGLAKSFWAEAVKTACYLINRSPSTAIGVKTPMEMWKGKPADYSSLH 261

Query: 385 IFGCPAYV 408
           +FGCP YV
Sbjct: 262 VFGCPVYV 269


>ACL97387.1 Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  155 bits (393), Expect = 3e-41
 Identities = 74/131 (56%), Positives = 92/131 (70%)
 Frame = +1

Query: 16  SLSKQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQ 195
           S+ K++K ++E  TGK++K   +DN  EY D  FL FC  EGITR F+V  T +QNGVA+
Sbjct: 527 SVFKEFKAQVELETGKRIKCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAE 586

Query: 196 RMNRTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFS 375
           RMNRTLLER + M   AGL KSFW EA  T CY+INRSPS  I  K P E+W GKP D+S
Sbjct: 587 RMNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYS 646

Query: 376 VMKIFGCPAYV 408
            +++FGCP YV
Sbjct: 647 SLRVFGCPVYV 657


>KYP40338.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 864

 Score =  155 bits (392), Expect = 3e-41
 Identities = 71/130 (54%), Positives = 92/130 (70%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K WK  +EN TG K+K   +DN  EY+D  F +FC + GI    +V  T +QNGVA+RMN
Sbjct: 497 KMWKAMVENETGLKIKKLRTDNGGEYEDTRFKRFCYEHGIRMERTVPGTPQQNGVAERMN 556

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           RTL ERA+ M++ +GLPK FW E +NT  YLINR PS  +++KIPEEVWSGK V  S ++
Sbjct: 557 RTLTERARSMRVQSGLPKQFWAETVNTAAYLINRGPSVPLEHKIPEEVWSGKEVKLSHLR 616

Query: 385 IFGCPAYVHL 414
           +FGC AYVH+
Sbjct: 617 VFGCVAYVHI 626


>KYP59920.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 259

 Score =  146 bits (369), Expect = 4e-41
 Identities = 66/124 (53%), Positives = 89/124 (71%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K+WK+ +EN TGK++K   +DN  E+    F  +C  EGI R ++V+ T +QNGVA+RMN
Sbjct: 104 KEWKILVENQTGKRIKRLRTDNGLEFCSAEFNDYCKKEGIVRQYTVRNTPQQNGVAERMN 163

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           RTLLE+ + +  NAGL KSFW EA+NT CYL+N SPS  I  K P EVWS KP ++S+++
Sbjct: 164 RTLLEKRRYLLSNAGLTKSFWAEAVNTACYLVNGSPSTIIGCKTPTEVWSTKPANYSILR 223

Query: 385 IFGC 396
           IFGC
Sbjct: 224 IFGC 227


>ACL97383.1 Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  154 bits (389), Expect = 9e-41
 Identities = 74/128 (57%), Positives = 89/128 (69%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K +K +IE  T KK+K   +DN  EY D  FL FC  EGI R F+V  T +QNGVA+RMN
Sbjct: 530 KAFKAQIELETRKKIKCLRTDNGGEYIDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMN 589

Query: 205 RTLLERAKCMKLNAGLPKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSVMK 384
           RTLLER + M   AG+ KSFW EA+ T CY+INRSPS  ID K P E+W GKPVD+S + 
Sbjct: 590 RTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLH 649

Query: 385 IFGCPAYV 408
           +FGCP YV
Sbjct: 650 VFGCPVYV 657


>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score =  153 bits (386), Expect = 1e-40
 Identities = 69/132 (52%), Positives = 97/132 (73%), Gaps = 2/132 (1%)
 Frame = +1

Query: 25  KQWKVKIEN*TGKKLKYFTSDNDTEYKDI*FLQFC*DEGITRNFSVKRTSEQNGVAQRMN 204
           K+WK  +E  TGKK+K   +DN  E+ +  F +FC + GI R+ ++    +QNGVA+R+N
Sbjct: 526 KKWKTLVETQTGKKVKKLRTDNGLEFCEGDFNEFCANHGIARHKTIPGKPQQNGVAERLN 585

Query: 205 RTLLERAKCMKLNAGL--PKSFWVEAINTTCYLINRSPSAGIDYKIPEEVWSGKPVDFSV 378
           RT+LERA+CM  NAGL   +  WVEA +T CYLINRSP + +++KIPEE+WSG P+D+S 
Sbjct: 586 RTILERARCMLSNAGLWHQRELWVEAASTACYLINRSPHSSLNFKIPEEIWSGNPIDYSN 645

Query: 379 MKIFGCPAYVHL 414
           ++IFGCPAY H+
Sbjct: 646 LRIFGCPAYAHV 657


Top