BLASTX nr result

ID: Panax25_contig00042494 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00042494
         (699 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM88922.1 hypothetical protein DCAR_025997 [Daucus carota subsp...    90   5e-17
XP_017217620.1 PREDICTED: transformation/transcription domain-as...    90   5e-17
CAN69918.1 hypothetical protein VITISV_044430 [Vitis vinifera]         57   6e-06

>KZM88922.1 hypothetical protein DCAR_025997 [Daucus carota subsp. sativus]
          Length = 3706

 Score = 90.1 bits (222), Expect = 5e-17
 Identities = 44/66 (66%), Positives = 46/66 (69%)
 Frame = +2

Query: 500 KVYQNFRLTVTHFLESGVVPPPAPXXXXXXXXXXXXXXIEDVKPLTMDMSDQMSHAVGAG 679
           K+YQNFRLTVTHF ESG VPPPAP              IEDVKPL MD+SDQMS   GAG
Sbjct: 145 KIYQNFRLTVTHFFESGAVPPPAPAISGSNSTTSALSTIEDVKPLAMDISDQMSPTAGAG 204

Query: 680 QLNPST 697
           QLNPST
Sbjct: 205 QLNPST 210


>XP_017217620.1 PREDICTED: transformation/transcription domain-associated protein
           [Daucus carota subsp. sativus]
          Length = 3895

 Score = 90.1 bits (222), Expect = 5e-17
 Identities = 44/66 (66%), Positives = 46/66 (69%)
 Frame = +2

Query: 500 KVYQNFRLTVTHFLESGVVPPPAPXXXXXXXXXXXXXXIEDVKPLTMDMSDQMSHAVGAG 679
           K+YQNFRLTVTHF ESG VPPPAP              IEDVKPL MD+SDQMS   GAG
Sbjct: 145 KIYQNFRLTVTHFFESGAVPPPAPAISGSNSTTSALSTIEDVKPLAMDISDQMSPTAGAG 204

Query: 680 QLNPST 697
           QLNPST
Sbjct: 205 QLNPST 210


>CAN69918.1 hypothetical protein VITISV_044430 [Vitis vinifera]
          Length = 303

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 37/71 (52%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
 Frame = +2

Query: 500 KVYQNFRLTVTHFLESG-VVPPPAPXXXXXXXXXXXXXXIEDVKPLTMDMSDQ----MSH 664
           K+YQNFRLTV+HF E+G  VP P P               EDVKP  MD+SDQ     + 
Sbjct: 119 KIYQNFRLTVSHFFENGAAVPVPVPVPVPVSVPVGG----EDVKP--MDVSDQAITTTTG 172

Query: 665 AVGAGQLNPST 697
            VGAGQLNPST
Sbjct: 173 YVGAGQLNPST 183


Top