BLASTX nr result
ID: Panax25_contig00042487
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00042487
(703 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJR32914.1 photosystem II protein L (chloroplast) [Dunalia spinosa] 113 3e-29
AFK48829.1 unknown [Lotus japonicus] 110 4e-28
EPS74274.1 hypothetical protein M569_00484, partial [Genlisea au... 75 1e-21
YP_009256050.1 photosystem II protein VI (chloroplast) [Scopolia... 93 2e-21
XP_003606015.1 cytochrome b559 subunit alpha [Medicago truncatul... 96 2e-21
EPS74273.1 hypothetical protein M569_00483, partial [Genlisea au... 93 4e-21
EPS74683.1 hypothetical protein M569_00058, partial [Genlisea au... 76 1e-20
KQK12756.1 hypothetical protein BRADI_1g05779 [Brachypodium dist... 65 5e-18
KQJ84944.1 hypothetical protein BRADI_5g23871 [Brachypodium dist... 65 5e-18
KRH27388.1 hypothetical protein GLYMA_12G232700 [Glycine max] 65 5e-17
XP_002888378.1 hypothetical protein ARALYDRAFT_894035 [Arabidops... 63 6e-14
YP_009111670.1 photosystem II protein L (chloroplast) [Apios ame... 71 4e-13
KJB39097.1 hypothetical protein B456_007G008800 [Gossypium raimo... 62 4e-13
ANP25832.1 photosystem II protein L (chloroplast) [Litsea glutin... 69 3e-12
XP_002886851.1 hypothetical protein ARALYDRAFT_893949 [Arabidops... 69 8e-12
EPS73485.1 cytochrome b559 subunit alpha [Genlisea aurea] 53 4e-11
AFU94384.1 PsbL, partial (chloroplast) [Schistostemon retusum] 65 7e-11
AFU94352.1 PsbL, partial (chloroplast) [Bergia texana] 65 7e-11
AKR80948.1 photosystem II protein L (plastid) [Lophiola aurea] 65 7e-11
YP_001312218.1 photosystem II protein L [Cycas taitungensis] YP_... 65 7e-11
>AJR32914.1 photosystem II protein L (chloroplast) [Dunalia spinosa]
Length = 65
Score = 113 bits (283), Expect = 3e-29
Identities = 53/58 (91%), Positives = 54/58 (93%)
Frame = -1
Query: 496 LYLPFFFWGQYQQCSSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
+YLP FFW QYQQCSSSNDK NPNYRA TQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 1 MYLPSFFWDQYQQCSSSNDKLNPNYRATTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 58
>AFK48829.1 unknown [Lotus japonicus]
Length = 72
Score = 110 bits (276), Expect = 4e-28
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = -1
Query: 481 FFWGQYQQCSSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
FFW QYQQCSSSNDKPNPNYRAMTQSNPNEQ+VELNRTSLYWGLLLIFVLAVL
Sbjct: 13 FFWDQYQQCSSSNDKPNPNYRAMTQSNPNEQSVELNRTSLYWGLLLIFVLAVL 65
>EPS74274.1 hypothetical protein M569_00484, partial [Genlisea aurea]
Length = 70
Score = 74.7 bits (182), Expect(2) = 1e-21
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = -1
Query: 430 PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
PNYR MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 28 PNYRTMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 63
Score = 56.6 bits (135), Expect(2) = 1e-21
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -2
Query: 510 CSRPSCTYRFFFGVNISNAVHPTINLI 430
CS PSCTYR FFGVNISNAVHPTINLI
Sbjct: 1 CSWPSCTYRLFFGVNISNAVHPTINLI 27
>YP_009256050.1 photosystem II protein VI (chloroplast) [Scopolia parviflora]
ANF05229.1 photosystem II protein VI (chloroplast)
[Scopolia parviflora]
Length = 47
Score = 93.2 bits (230), Expect = 2e-21
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = -2
Query: 519 MVGCSRPSCTYRFFFGVNISNAVHPTINLIRIIEL*HNQTRTNKMLN 379
MVGCSRPSCTYR FFG+NISNAVHPTINLIRIIEL HNQTRTNKML+
Sbjct: 1 MVGCSRPSCTYRLFFGINISNAVHPTINLIRIIELRHNQTRTNKMLS 47
>XP_003606015.1 cytochrome b559 subunit alpha [Medicago truncatula] AES88212.1
cytochrome b559 subunit alpha [Medicago truncatula]
Length = 136
Score = 95.9 bits (237), Expect = 2e-21
Identities = 45/49 (91%), Positives = 47/49 (95%)
Frame = -1
Query: 469 QYQQCSSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
++ QCSSSNDKPNPNYRA TQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 81 RWLQCSSSNDKPNPNYRATTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 129
>EPS74273.1 hypothetical protein M569_00483, partial [Genlisea aurea]
Length = 81
Score = 93.2 bits (230), Expect = 4e-21
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -3
Query: 176 SGVNG*YYWKDSSLDNRYCSWYSCDWFNRYFFLWFIFRIGFIPVVI 39
SG+NG +YWKDSSLDNRYC+WYSCDW NRYF LW IFRI FIPVVI
Sbjct: 1 SGINGRHYWKDSSLDNRYCNWYSCDWLNRYFLLWVIFRIRFIPVVI 46
>EPS74683.1 hypothetical protein M569_00058, partial [Genlisea aurea]
Length = 67
Score = 76.3 bits (186), Expect(2) = 1e-20
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = -1
Query: 430 PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 28 PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 63
Score = 51.6 bits (122), Expect(2) = 1e-20
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2
Query: 510 CSRPSCTYRFFFGVNISNAVHPTINLI 430
CS PSCTYR F GVNISNAVHPT NLI
Sbjct: 1 CSWPSCTYRLFLGVNISNAVHPTKNLI 27
>KQK12756.1 hypothetical protein BRADI_1g05779 [Brachypodium distachyon]
Length = 142
Score = 65.5 bits (158), Expect(2) = 5e-18
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1
Query: 421 RAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
+ MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 103 QTMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 135
Score = 53.9 bits (128), Expect(2) = 5e-18
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -3
Query: 533 DESLRWLAVHGLAVPTVFFLGSISAMQ 453
DE +RWLA+HGLAVPTVFFLGSISAMQ
Sbjct: 77 DEFMRWLAIHGLAVPTVFFLGSISAMQ 103
>KQJ84944.1 hypothetical protein BRADI_5g23871 [Brachypodium distachyon]
KQK18180.1 hypothetical protein BRADI_1g39213
[Brachypodium distachyon]
Length = 142
Score = 65.5 bits (158), Expect(2) = 5e-18
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1
Query: 421 RAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
+ MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 103 QTMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 135
Score = 53.9 bits (128), Expect(2) = 5e-18
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -3
Query: 533 DESLRWLAVHGLAVPTVFFLGSISAMQ 453
DE +RWLA+HGLAVPTVFFLGSISAMQ
Sbjct: 77 DEFMRWLAIHGLAVPTVFFLGSISAMQ 103
>KRH27388.1 hypothetical protein GLYMA_12G232700 [Glycine max]
Length = 142
Score = 64.7 bits (156), Expect(2) = 5e-17
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -1
Query: 421 RAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
+A TQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 103 QATTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 135
Score = 51.2 bits (121), Expect(2) = 5e-17
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -3
Query: 533 DESLRWLAVHGLAVPTVFFLGSISAMQ 453
DE +RWLAVHGLAVPTV FLGSISAMQ
Sbjct: 77 DEFIRWLAVHGLAVPTVSFLGSISAMQ 103
>XP_002888378.1 hypothetical protein ARALYDRAFT_894035 [Arabidopsis lyrata subsp.
lyrata] EFH64637.1 hypothetical protein
ARALYDRAFT_894035 [Arabidopsis lyrata subsp. lyrata]
Length = 136
Score = 63.2 bits (152), Expect(2) = 6e-14
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -1
Query: 418 AMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
AMTQSNPNEQ+VELNRTSLYWGLL IFVLAVL
Sbjct: 98 AMTQSNPNEQSVELNRTSLYWGLLFIFVLAVL 129
Score = 42.4 bits (98), Expect(2) = 6e-14
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -3
Query: 533 DESLRWLAVHGLAVPTVFFLGSIS 462
DE +RWLAVHGLAVPTV FLG+++
Sbjct: 77 DEFMRWLAVHGLAVPTVSFLGAMT 100
>YP_009111670.1 photosystem II protein L (chloroplast) [Apios americana]
YP_009172292.1 photosystem II protein L (chloroplast)
[Colobanthus quitensis] YP_009309171.1 photosystem II
protein L (chloroplast) [Cajanus cajan] AHI95799.1
photosystem II protein L (chloroplast) [Apios americana]
ALF99689.1 photosystem II protein L (chloroplast)
[Colobanthus quitensis] AOS87035.1 photosystem II
protein L (chloroplast) [Cajanus cajan]
Length = 43
Score = 71.2 bits (173), Expect = 4e-13
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -1
Query: 427 NYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
NYRA TQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 2 NYRATTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 36
>KJB39097.1 hypothetical protein B456_007G008800 [Gossypium raimondii]
Length = 85
Score = 62.0 bits (149), Expect(2) = 4e-13
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -1
Query: 418 AMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
AMTQSNPNEQNVEL TSLYWGLLLIFVLAVL
Sbjct: 47 AMTQSNPNEQNVELKSTSLYWGLLLIFVLAVL 78
Score = 40.8 bits (94), Expect(2) = 4e-13
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -3
Query: 533 DESLRWLAVHGLAVPTVFFLGSIS 462
DE +RWL VHGLAVPTV FLG+++
Sbjct: 26 DEFMRWLVVHGLAVPTVSFLGAMT 49
>ANP25832.1 photosystem II protein L (chloroplast) [Litsea glutinosa]
Length = 42
Score = 68.9 bits (167), Expect = 3e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -1
Query: 424 YRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
YRA TQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 2 YRATTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 35
>XP_002886851.1 hypothetical protein ARALYDRAFT_893949 [Arabidopsis lyrata subsp.
lyrata] EFH63110.1 hypothetical protein
ARALYDRAFT_893949 [Arabidopsis lyrata subsp. lyrata]
Length = 85
Score = 68.9 bits (167), Expect = 8e-12
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = -3
Query: 143 SSLDNRYCSWYSCDWFNRYFFLWFIFRIGFIPVVI 39
SSL NRYCSWYSCD FNRYF LWFIFRI FIPV I
Sbjct: 50 SSLGNRYCSWYSCDRFNRYFLLWFIFRIRFIPVEI 84
Score = 60.1 bits (144), Expect = 2e-08
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 415 MTQSNPNEQNVELNRTSLYWGLLLIFVLA 329
MTQSNPNEQ+VELNRTSLYWGLLLIFVLA
Sbjct: 1 MTQSNPNEQSVELNRTSLYWGLLLIFVLA 29
>EPS73485.1 cytochrome b559 subunit alpha [Genlisea aurea]
Length = 131
Score = 52.8 bits (125), Expect(2) = 4e-11
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -3
Query: 527 SLRWLAVHGLAVPTVFFLGSISAMQFIQ 444
+ RWLAVH LA+PTVFF+GSISAMQFIQ
Sbjct: 76 TFRWLAVHALAIPTVFFIGSISAMQFIQ 103
Score = 43.1 bits (100), Expect(2) = 4e-11
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1
Query: 385 VELNRTSLYWGLLLIFVLAVL 323
+ELNRTSLYWGLLLIFVLAVL
Sbjct: 104 LELNRTSLYWGLLLIFVLAVL 124
>AFU94384.1 PsbL, partial (chloroplast) [Schistostemon retusum]
Length = 33
Score = 65.1 bits (157), Expect = 7e-11
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 415 MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 1 MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 31
>AFU94352.1 PsbL, partial (chloroplast) [Bergia texana]
Length = 36
Score = 65.1 bits (157), Expect = 7e-11
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 415 MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 1 MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 31
>AKR80948.1 photosystem II protein L (plastid) [Lophiola aurea]
Length = 38
Score = 65.1 bits (157), Expect = 7e-11
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 415 MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 1 MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 31
>YP_001312218.1 photosystem II protein L [Cycas taitungensis] YP_005352722.1 psbL
gene product (chloroplast) [Ginkgo biloba]
YP_007474639.1 photosystem II protein L (chloroplast)
[Cycas revoluta] YP_009113554.1 photosystem II protein L
(chloroplast) [Bowenia serrulata] YP_009113641.1
photosystem II protein L (chloroplast) [Ceratozamia
hildae] YP_009113742.1 photosystem II protein L
(chloroplast) [Zamia furfuracea] YP_009113837.1
photosystem II protein L (chloroplast) [Stangeria
eriopus] YP_009158357.1 photosystem II protein L
(chloroplast) [Macrozamia mountperriensis]
YP_009158444.1 photosystem II protein L (chloroplast)
[Dioon spinulosum] YP_009158531.1 photosystem II protein
L (chloroplast) [Lepidozamia peroffskyana]
YP_009158618.1 photosystem II protein L (chloroplast)
[Encephalartos lehmannii] YP_009308209.1 photosystem II
protein L (chloroplast) [Cycas panzhihuaensis] Q71L51.1
RecName: Full=Photosystem II reaction center protein L;
Short=PSII-L Q71L70.1 RecName: Full=Photosystem II
reaction center protein L; Short=PSII-L Q71L82.1
RecName: Full=Photosystem II reaction center protein L;
Short=PSII-L Q7IW42.1 RecName: Full=Photosystem II
reaction center protein L; Short=PSII-L Q9THZ2.1
RecName: Full=Photosystem II reaction center protein L;
Short=PSII-L A6H5J3.1 RecName: Full=Photosystem II
reaction center protein L; Short=PSII-L CAB61493.1
L-peptide (chloroplast) [Ginkgo biloba] AAF73301.1
photosystem II subunit L (chloroplast) [Zamia
furfuracea] AAG26224.1 photosystem II subunit
(chloroplast) [Ginkgo biloba] AAQ05222.1 photosystem II
subunit L (chloroplast) [Bowenia serrulata] AAQ05230.1
photosystem II subunit L (chloroplast) [Ceratozamia
miqueliana] AAQ05234.1 photosystem II subunit L
(chloroplast) [Cycas revoluta] AAQ05238.1 photosystem II
subunit L (chloroplast) [Dioon purpusii] AAQ05242.1
photosystem II subunit L (chloroplast) [Encephalartos
barteri] AAQ05253.1 photosystem II subunit L
(chloroplast) [Stangeria eriopus] AAW21828.1 photosystem
II subunit L (chloroplast) [Lepidozamia hopei]
AAW21832.1 photosystem II subunit L (chloroplast)
[Macrozamia moorei] AAZ04907.1 photosystem II protein L,
partial (chloroplast) [Ginkgo biloba] BAF64959.1
photosystem II protein L (chloroplast) [Cycas
taitungensis] ABU85280.1 photosystem II protein L,
partial (chloroplast) [Cycas micronesica] BAL03652.1
photosystem II protein L (chloroplast) [Bowenia
serrulata] AEQ37128.1 photosystem II protein L
(chloroplast) [Ginkgo biloba] AEX98435.1 photosystem II
protein L (chloroplast) [Ginkgo biloba] AEX98853.1
photosystem II protein L (chloroplast) [Ginkgo biloba]
AEX99020.1 photosystem II protein L (chloroplast)
[Ginkgo biloba] AEX99188.1 photosystem II protein L
(chloroplast) [Cycas revoluta] BAL72607.1 photosystem II
protein L (chloroplast) [Ginkgo biloba] AFM54160.1 PsbL
(chloroplast) [Ceratozamia hildae] AFM54161.1 PsbL
(chloroplast) [Zamia furfuracea] AFR13732.1 photosystem
II protein L (chloroplast) [Bowenia serrulata]
AFR13819.1 photosystem II protein L (chloroplast)
[Ceratozamia hildae] AFR45389.1 photosystem II protein L
(chloroplast) [Zamia furfuracea] AFR45485.1 photosystem
II protein L (chloroplast) [Stangeria eriopus]
AFR53222.1 photosystem II protein L (chloroplast)
[Encephalartos lehmannii] AFR59404.1 photosystem II
protein L (chloroplast) [Lepidozamia peroffskyana]
AFS64393.1 photosystem II protein L (chloroplast)
[Macrozamia mountperriensis] AFS64456.1 photosystem II
protein L (chloroplast) [Dioon spinulosum] AJE71406.1
photosystem II protein L (plastid) [Ginkgo biloba]
BAR93307.1 photosystem II protein L (chloroplast) [Zamia
furfuracea] BAR93393.1 photosystem II protein L
(chloroplast) [Stangeria eriopus] BAR93476.1 photosystem
II protein L (chloroplast) [Ceratozamia hildae]
BAR93563.1 photosystem II protein L (chloroplast)
[Macrozamia mountperriensis] BAR93650.1 photosystem II
protein L (chloroplast) [Dioon spinulosum] BAR93737.1
photosystem II protein L (chloroplast) [Lepidozamia
peroffskyana] BAR93824.1 photosystem II protein L
(chloroplast) [Encephalartos lehmannii] AOS53158.1
photosystem II protein L (chloroplast) [Cycas
panzhihuaensis]
Length = 38
Score = 65.1 bits (157), Expect = 7e-11
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -1
Query: 415 MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 323
MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL
Sbjct: 1 MTQSNPNEQNVELNRTSLYWGLLLIFVLAVL 31