BLASTX nr result

ID: Panax25_contig00042268 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00042268
         (532 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017246292.1 PREDICTED: uncharacterized protein LOC108217899 i...    60   2e-12
XP_017246293.1 PREDICTED: uncharacterized protein LOC108217899 i...    60   2e-12
XP_017245160.1 PREDICTED: uncharacterized protein LOC108216827 [...    44   1e-06

>XP_017246292.1 PREDICTED: uncharacterized protein LOC108217899 isoform X1 [Daucus
           carota subsp. sativus]
          Length = 217

 Score = 60.5 bits (145), Expect(2) = 2e-12
 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
 Frame = +2

Query: 179 MSMTRSVISSNFTSLNIKFSRRFRTFFFNPISHLPIQKYRNGSLFEGSRSLQYFRANRMA 358
           MS+ RS++    +  +I    R+R   FNPI    ++ + N SL+  +RSL++       
Sbjct: 1   MSIARSIVCG-ISCTSITPLPRYRALVFNPIFETRVRGHGNKSLYSANRSLRF----STW 55

Query: 359 QNNSKTKRNLVVYCNLPPGTP-----LPFGALPDSWKDW 460
           Q+ SK KRN  VY ++PP  P     LP G LP SWK+W
Sbjct: 56  QHESKIKRNFAVYSSIPPEVPVSSGGLP-GGLPGSWKNW 93



 Score = 38.5 bits (88), Expect(2) = 2e-12
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +1

Query: 463 IGNAVTVAVSLLTNKWGTILKWT 531
           +G  VTV + LLTNKWG +LKWT
Sbjct: 95  LGMVVTVLIPLLTNKWGALLKWT 117


>XP_017246293.1 PREDICTED: uncharacterized protein LOC108217899 isoform X2 [Daucus
           carota subsp. sativus] KZM99759.1 hypothetical protein
           DCAR_012879 [Daucus carota subsp. sativus]
          Length = 213

 Score = 60.5 bits (145), Expect(2) = 2e-12
 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
 Frame = +2

Query: 179 MSMTRSVISSNFTSLNIKFSRRFRTFFFNPISHLPIQKYRNGSLFEGSRSLQYFRANRMA 358
           MS+ RS++    +  +I    R+R   FNPI    ++ + N SL+  +RSL++       
Sbjct: 1   MSIARSIVCG-ISCTSITPLPRYRALVFNPIFETRVRGHGNKSLYSANRSLRF----STW 55

Query: 359 QNNSKTKRNLVVYCNLPPGTP-----LPFGALPDSWKDW 460
           Q+ SK KRN  VY ++PP  P     LP G LP SWK+W
Sbjct: 56  QHESKIKRNFAVYSSIPPEVPVSSGGLP-GGLPGSWKNW 93



 Score = 38.5 bits (88), Expect(2) = 2e-12
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +1

Query: 463 IGNAVTVAVSLLTNKWGTILKWT 531
           +G  VTV + LLTNKWG +LKWT
Sbjct: 95  LGMVVTVLIPLLTNKWGALLKWT 117


>XP_017245160.1 PREDICTED: uncharacterized protein LOC108216827 [Daucus carota
           subsp. sativus] KZM99760.1 hypothetical protein
           DCAR_012878 [Daucus carota subsp. sativus]
          Length = 214

 Score = 43.5 bits (101), Expect(2) = 1e-06
 Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
 Frame = +2

Query: 245 FRTFFFNPISHLPIQKYRNGSLFEGSRSLQYFRANRMAQNNSKTKRNLVVYCN-LPPGTP 421
           F+TF FNPIS   I++  + S    +R+++Y     + Q++ K KRN VV  N +PP + 
Sbjct: 22  FQTFLFNPISETWIRRNGDKSSCITNRNIRY----SVWQHDVKLKRNFVVCSNGVPPESS 77

Query: 422 -----LPFGALPDSWKDW 460
                LP G +P SWK W
Sbjct: 78  ASSGGLP-GGIPGSWKSW 94



 Score = 35.8 bits (81), Expect(2) = 1e-06
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +1

Query: 463 IGNAVTVAVSLLTNKWGTILKWT 531
           +G  VTV + L+TNKWG IL WT
Sbjct: 96  LGIVVTVIIPLMTNKWGAILTWT 118


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