BLASTX nr result
ID: Panax25_contig00042268
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax25_contig00042268 (532 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_017246292.1 PREDICTED: uncharacterized protein LOC108217899 i... 60 2e-12 XP_017246293.1 PREDICTED: uncharacterized protein LOC108217899 i... 60 2e-12 XP_017245160.1 PREDICTED: uncharacterized protein LOC108216827 [... 44 1e-06 >XP_017246292.1 PREDICTED: uncharacterized protein LOC108217899 isoform X1 [Daucus carota subsp. sativus] Length = 217 Score = 60.5 bits (145), Expect(2) = 2e-12 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 5/99 (5%) Frame = +2 Query: 179 MSMTRSVISSNFTSLNIKFSRRFRTFFFNPISHLPIQKYRNGSLFEGSRSLQYFRANRMA 358 MS+ RS++ + +I R+R FNPI ++ + N SL+ +RSL++ Sbjct: 1 MSIARSIVCG-ISCTSITPLPRYRALVFNPIFETRVRGHGNKSLYSANRSLRF----STW 55 Query: 359 QNNSKTKRNLVVYCNLPPGTP-----LPFGALPDSWKDW 460 Q+ SK KRN VY ++PP P LP G LP SWK+W Sbjct: 56 QHESKIKRNFAVYSSIPPEVPVSSGGLP-GGLPGSWKNW 93 Score = 38.5 bits (88), Expect(2) = 2e-12 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = +1 Query: 463 IGNAVTVAVSLLTNKWGTILKWT 531 +G VTV + LLTNKWG +LKWT Sbjct: 95 LGMVVTVLIPLLTNKWGALLKWT 117 >XP_017246293.1 PREDICTED: uncharacterized protein LOC108217899 isoform X2 [Daucus carota subsp. sativus] KZM99759.1 hypothetical protein DCAR_012879 [Daucus carota subsp. sativus] Length = 213 Score = 60.5 bits (145), Expect(2) = 2e-12 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 5/99 (5%) Frame = +2 Query: 179 MSMTRSVISSNFTSLNIKFSRRFRTFFFNPISHLPIQKYRNGSLFEGSRSLQYFRANRMA 358 MS+ RS++ + +I R+R FNPI ++ + N SL+ +RSL++ Sbjct: 1 MSIARSIVCG-ISCTSITPLPRYRALVFNPIFETRVRGHGNKSLYSANRSLRF----STW 55 Query: 359 QNNSKTKRNLVVYCNLPPGTP-----LPFGALPDSWKDW 460 Q+ SK KRN VY ++PP P LP G LP SWK+W Sbjct: 56 QHESKIKRNFAVYSSIPPEVPVSSGGLP-GGLPGSWKNW 93 Score = 38.5 bits (88), Expect(2) = 2e-12 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = +1 Query: 463 IGNAVTVAVSLLTNKWGTILKWT 531 +G VTV + LLTNKWG +LKWT Sbjct: 95 LGMVVTVLIPLLTNKWGALLKWT 117 >XP_017245160.1 PREDICTED: uncharacterized protein LOC108216827 [Daucus carota subsp. sativus] KZM99760.1 hypothetical protein DCAR_012878 [Daucus carota subsp. sativus] Length = 214 Score = 43.5 bits (101), Expect(2) = 1e-06 Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 6/78 (7%) Frame = +2 Query: 245 FRTFFFNPISHLPIQKYRNGSLFEGSRSLQYFRANRMAQNNSKTKRNLVVYCN-LPPGTP 421 F+TF FNPIS I++ + S +R+++Y + Q++ K KRN VV N +PP + Sbjct: 22 FQTFLFNPISETWIRRNGDKSSCITNRNIRY----SVWQHDVKLKRNFVVCSNGVPPESS 77 Query: 422 -----LPFGALPDSWKDW 460 LP G +P SWK W Sbjct: 78 ASSGGLP-GGIPGSWKSW 94 Score = 35.8 bits (81), Expect(2) = 1e-06 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 463 IGNAVTVAVSLLTNKWGTILKWT 531 +G VTV + L+TNKWG IL WT Sbjct: 96 LGIVVTVIIPLMTNKWGAILTWT 118