BLASTX nr result
ID: Panax25_contig00042011
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00042011
(391 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAU76848.1 Retrovirus-related Pol polyprotein from transposon TN... 192 1e-54
ABW74566.1 integrase [Boechera divaricarpa] 187 2e-52
JAU21819.1 Retrovirus-related Pol polyprotein from transposon TN... 172 5e-52
CAN71759.1 hypothetical protein VITISV_020777 [Vitis vinifera] 182 5e-51
CAN60366.1 hypothetical protein VITISV_031870 [Vitis vinifera] 182 5e-51
CAN72676.1 hypothetical protein VITISV_020406 [Vitis vinifera] 182 7e-51
CAN60238.1 hypothetical protein VITISV_032906 [Vitis vinifera] 182 1e-50
CAN79116.1 hypothetical protein VITISV_002093 [Vitis vinifera] 176 1e-48
AAT38758.1 Putative gag-pol polyprotein, identical [Solanum demi... 175 2e-48
CAA69272.1 lectin receptor kinase, partial [Arabidopsis thaliana] 171 6e-48
KZV32174.1 retrovirus-related Pol polyprotein from transposon TN... 172 7e-48
XP_012853620.1 PREDICTED: uncharacterized protein LOC105973146 [... 170 1e-47
GAU48802.1 hypothetical protein TSUD_406350 [Trifolium subterran... 172 1e-47
AAF16534.1 T26F17.17 [Arabidopsis thaliana] 172 2e-47
AAG50698.1 copia-type polyprotein, putative [Arabidopsis thalian... 172 2e-47
XP_013688817.1 PREDICTED: uncharacterized protein LOC106392554, ... 172 4e-47
CAB75469.1 copia-type reverse transcriptase-like protein [Arabid... 171 5e-47
CAB71063.1 copia-type polyprotein [Arabidopsis thaliana] 171 7e-47
AAD50001.1 Hypothetical protein [Arabidopsis thaliana] 171 7e-47
KYP66219.1 Retrovirus-related Pol polyprotein from transposon TN... 171 9e-47
>JAU76848.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 900
Score = 192 bits (488), Expect = 1e-54
Identities = 95/130 (73%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Frame = +1
Query: 7 GIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISPTK 186
GI +LT TPEQNGVAERKNRTVVEMARSML +K LPN+FWAE+V T+V+LLNISPTK
Sbjct: 164 GIHHELTTAYTPEQNGVAERKNRTVVEMARSMLKQKNLPNQFWAESVRTAVYLLNISPTK 223
Query: 187 AVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLIDC---SKLDKKSEKYIFVGYSGETKGYR 357
AV N TPYEAW RKP VSHL++FGSIAYSLID KLD KSEK IF+GYS ++KGYR
Sbjct: 224 AVLNRTPYEAWCGRKPGVSHLRVFGSIAYSLIDAHNRKKLDDKSEKCIFLGYSSQSKGYR 283
Query: 358 LYNPENGKLI 387
LYNP +GK+I
Sbjct: 284 LYNPVSGKII 293
>ABW74566.1 integrase [Boechera divaricarpa]
Length = 1165
Score = 187 bits (474), Expect = 2e-52
Identities = 90/132 (68%), Positives = 107/132 (81%), Gaps = 3/132 (2%)
Frame = +1
Query: 1 QNGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISP 180
+ GI +LT TPEQNGVAERKN TVVEMARSML E+ LPN+FWAE+V T+V+LLNISP
Sbjct: 424 KEGIHHELTTAYTPEQNGVAERKNTTVVEMARSMLKERNLPNQFWAESVRTAVYLLNISP 483
Query: 181 TKAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLIDC---SKLDKKSEKYIFVGYSGETKG 351
TKAV N TPYEAW RKP VSHL++FGS+ YSLID KLD+KSEK IF+GY ++KG
Sbjct: 484 TKAVLNRTPYEAWCGRKPGVSHLRVFGSVCYSLIDAHNRKKLDEKSEKCIFLGYCSQSKG 543
Query: 352 YRLYNPENGKLI 387
YRLYNP +GK++
Sbjct: 544 YRLYNPVSGKIV 555
>JAU21819.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 201
Score = 172 bits (435), Expect = 5e-52
Identities = 85/132 (64%), Positives = 102/132 (77%), Gaps = 3/132 (2%)
Frame = +1
Query: 4 NGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISPT 183
NGI+RQLT+ RTP+QNGVAERKNRT++EMARSML K LP E WAE VA +V+L N SPT
Sbjct: 11 NGIRRQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKELWAEAVACAVYLSNRSPT 70
Query: 184 KAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLI---DCSKLDKKSEKYIFVGYSGETKGY 354
++V TP EAW RKP VSHL++FGSIA++ + SKLD KSEKYIF+GY +KGY
Sbjct: 71 RSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDANSKGY 130
Query: 355 RLYNPENGKLII 390
+LYNPE K II
Sbjct: 131 KLYNPETKKTII 142
>CAN71759.1 hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 182 bits (463), Expect = 5e-51
Identities = 89/133 (66%), Positives = 108/133 (81%), Gaps = 3/133 (2%)
Frame = +1
Query: 1 QNGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISP 180
+ G+ R+LT +P QNGVAERKNRTVVEMARSM+ K L N FWAE VAT+V+LLNISP
Sbjct: 568 EEGLHRELTTPYSPXQNGVAERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISP 627
Query: 181 TKAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLIDC---SKLDKKSEKYIFVGYSGETKG 351
TKAV N TPYEAW+ RKP VSHLK+FGS+AY+LID SKLD+KS K IF+GY ++KG
Sbjct: 628 TKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHNRSKLDEKSVKCIFIGYCSQSKG 687
Query: 352 YRLYNPENGKLII 390
Y+LYNP +GK+I+
Sbjct: 688 YKLYNPVSGKIIV 700
>CAN60366.1 hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 182 bits (463), Expect = 5e-51
Identities = 89/133 (66%), Positives = 108/133 (81%), Gaps = 3/133 (2%)
Frame = +1
Query: 1 QNGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISP 180
+ G+ R+LT +PEQNGVAERKNRTVVEMARSM+ K L N FWAE VAT+V+LLNISP
Sbjct: 583 EEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISP 642
Query: 181 TKAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLIDC---SKLDKKSEKYIFVGYSGETKG 351
TKAV N TPYEAW+ RKP VSHLK+FGS+AY+LID S LD+KS K IF+GY ++KG
Sbjct: 643 TKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHNHSNLDEKSIKCIFIGYCSQSKG 702
Query: 352 YRLYNPENGKLII 390
Y+LYNP +GK+I+
Sbjct: 703 YKLYNPVSGKIIV 715
>CAN72676.1 hypothetical protein VITISV_020406 [Vitis vinifera]
Length = 1183
Score = 182 bits (462), Expect = 7e-51
Identities = 88/133 (66%), Positives = 109/133 (81%), Gaps = 3/133 (2%)
Frame = +1
Query: 1 QNGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISP 180
+ G+ R+LT +PEQNGVAERKNRTVVEMARSM+ K L N FWAE VAT+V+LLNISP
Sbjct: 517 EEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISP 576
Query: 181 TKAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLIDC---SKLDKKSEKYIFVGYSGETKG 351
TKAV N TPYEAW+ +KP VSHLK+FGS+AY+LI+ SKLD+KS K IF+GY ++KG
Sbjct: 577 TKAVLNRTPYEAWYGKKPWVSHLKVFGSVAYTLIESHNRSKLDEKSVKCIFIGYCSQSKG 636
Query: 352 YRLYNPENGKLII 390
Y+LYNP +GK+I+
Sbjct: 637 YKLYNPVSGKIIV 649
>CAN60238.1 hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 182 bits (461), Expect = 1e-50
Identities = 88/133 (66%), Positives = 108/133 (81%), Gaps = 3/133 (2%)
Frame = +1
Query: 1 QNGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISP 180
+ G+ R+LT +PEQNGVAERKNRTVVEMARSM+ K L N FWAE VAT+V+LLNISP
Sbjct: 694 EEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMXAKNLSNHFWAEGVATAVYLLNISP 753
Query: 181 TKAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLIDC---SKLDKKSEKYIFVGYSGETKG 351
TKAV N TPYEAW+ RKP VSHLK+FGS+AY+L + SKLD+KS K IF+GY ++KG
Sbjct: 754 TKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLXBSHNRSKLDEKSVKCIFIGYCSQSKG 813
Query: 352 YRLYNPENGKLII 390
Y+LYNP +GK+I+
Sbjct: 814 YKLYNPVSGKIIV 826
>CAN79116.1 hypothetical protein VITISV_002093 [Vitis vinifera]
Length = 1109
Score = 176 bits (446), Expect = 1e-48
Identities = 86/126 (68%), Positives = 102/126 (80%), Gaps = 3/126 (2%)
Frame = +1
Query: 1 QNGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISP 180
+ G+ R+LT +PEQNGV ERKNRTVVEMARSM+ K L N FWAE VAT+V+LLNISP
Sbjct: 546 EEGLHRELTTPYSPEQNGVVERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISP 605
Query: 181 TKAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLIDC---SKLDKKSEKYIFVGYSGETKG 351
TKAV N TPYEAW+ RKP VSHLK+FGS+AY+LID SKLD+KS K IF+GY ++KG
Sbjct: 606 TKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHNRSKLDEKSVKCIFIGYCSQSKG 665
Query: 352 YRLYNP 369
Y+LYNP
Sbjct: 666 YKLYNP 671
>AAT38758.1 Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 175 bits (444), Expect = 2e-48
Identities = 90/131 (68%), Positives = 105/131 (80%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 QNGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISP 180
+NGI+R+LT TPEQNGVAERKNRTVVEMARS L KGLP+ FW E VAT V+ LNISP
Sbjct: 588 ENGIRRELTAPYTPEQNGVAERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNISP 647
Query: 181 TKAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLIDC-SKLDKKSEKYIFVGYSGETKGYR 357
TK V N TP EAW +KP VSHL+IFG IAY+L++ SKLD+KS K IFVGYS ++K YR
Sbjct: 648 TKDVWNTTPLEAWNGKKPRVSHLRIFGCIAYALVNFHSKLDEKSTKCIFVGYSLQSKAYR 707
Query: 358 LYNPENGKLII 390
LYNP +GK+II
Sbjct: 708 LYNPISGKVII 718
>CAA69272.1 lectin receptor kinase, partial [Arabidopsis thaliana]
Length = 623
Score = 171 bits (434), Expect = 6e-48
Identities = 84/132 (63%), Positives = 103/132 (78%), Gaps = 3/132 (2%)
Frame = +1
Query: 4 NGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISPT 183
NGI+RQLT+ R+P+QNGVAERKNRT++EMARSML K LP E WAE VA +V+LLN SPT
Sbjct: 110 NGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPT 169
Query: 184 KAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLI---DCSKLDKKSEKYIFVGYSGETKGY 354
K+V TP EAW RKP VSHL++FGSIA++ + +KLD KSEKYIF+GY +KGY
Sbjct: 170 KSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGY 229
Query: 355 RLYNPENGKLII 390
+LYNP+ K II
Sbjct: 230 KLYNPDTKKTII 241
>KZV32174.1 retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dorcoceras hygrometricum]
Length = 699
Score = 172 bits (436), Expect = 7e-48
Identities = 82/133 (61%), Positives = 104/133 (78%), Gaps = 3/133 (2%)
Frame = +1
Query: 1 QNGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISP 180
++GI ++LT TPEQNGVAERKNRT+VEMARSML KGLP FWAE V T+V+L+N+SP
Sbjct: 434 KHGIHKELTAPYTPEQNGVAERKNRTIVEMARSMLKSKGLPYNFWAEAVTTAVYLINLSP 493
Query: 181 TKAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLIDCS---KLDKKSEKYIFVGYSGETKG 351
TKAV N TPYEAW ++P+V HLKIFG I Y LI+ + KL++KS K IF+GY ++K
Sbjct: 494 TKAVMNKTPYEAWSGKRPSVEHLKIFGCIVYVLINANERHKLEEKSIKCIFIGYCSQSKA 553
Query: 352 YRLYNPENGKLII 390
YR+YNP GK+I+
Sbjct: 554 YRVYNPATGKVIV 566
>XP_012853620.1 PREDICTED: uncharacterized protein LOC105973146 [Erythranthe
guttata]
Length = 580
Score = 170 bits (431), Expect = 1e-47
Identities = 79/133 (59%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
Frame = +1
Query: 1 QNGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISP 180
+NGI+R LT+ R+P+QNGV ERKNRT++ MARSML K +PNEFWAE VA +V+L N SP
Sbjct: 311 ENGIRRPLTVPRSPQQNGVVERKNRTILNMARSMLKAKRMPNEFWAEAVACAVYLANRSP 370
Query: 181 TKAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLI---DCSKLDKKSEKYIFVGYSGETKG 351
TK V N TP EAW +KP+V HL++FGSIAY + + SKLD +S KY+F+GY +KG
Sbjct: 371 TKDVENQTPLEAWSGKKPSVHHLRVFGSIAYGHVPAQERSKLDDRSAKYVFIGYDLNSKG 430
Query: 352 YRLYNPENGKLII 390
Y+LYNP NGK+++
Sbjct: 431 YKLYNPANGKIVV 443
>GAU48802.1 hypothetical protein TSUD_406350 [Trifolium subterraneum]
Length = 785
Score = 172 bits (436), Expect = 1e-47
Identities = 84/132 (63%), Positives = 103/132 (78%), Gaps = 3/132 (2%)
Frame = +1
Query: 4 NGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISPT 183
NGI+RQLT+ R+P+QNGV ERKNRT++EMARSML K LP E WAE VA +V+L N SPT
Sbjct: 178 NGIRRQLTVPRSPQQNGVPERKNRTILEMARSMLKSKRLPKELWAEVVACAVYLSNRSPT 237
Query: 184 KAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLI---DCSKLDKKSEKYIFVGYSGETKGY 354
++V TP EAW RKP +SHL+IFGSIA++ + SKLD KSEKYIF+GY G +KGY
Sbjct: 238 RSVLGKTPQEAWSGRKPGISHLRIFGSIAHAHVLDEKRSKLDDKSEKYIFIGYDGNSKGY 297
Query: 355 RLYNPENGKLII 390
+LYNP+ GK II
Sbjct: 298 KLYNPDTGKTII 309
>AAF16534.1 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 172 bits (437), Expect = 2e-47
Identities = 85/132 (64%), Positives = 103/132 (78%), Gaps = 3/132 (2%)
Frame = +1
Query: 4 NGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISPT 183
NGI+RQLT+ R+P+QNGVAERKNRT++EMARSML K LP E WAE VA +V+LLN SPT
Sbjct: 552 NGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPT 611
Query: 184 KAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLI---DCSKLDKKSEKYIFVGYSGETKGY 354
K+V TP EAW RKP VSHL++FGSIA++ + SKLD KSEKYIF+GY +KGY
Sbjct: 612 KSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGY 671
Query: 355 RLYNPENGKLII 390
+LYNP+ K II
Sbjct: 672 KLYNPDTKKTII 683
>AAG50698.1 copia-type polyprotein, putative [Arabidopsis thaliana] AAG50765.1
copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 172 bits (437), Expect = 2e-47
Identities = 85/132 (64%), Positives = 103/132 (78%), Gaps = 3/132 (2%)
Frame = +1
Query: 4 NGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISPT 183
NGI+RQLT+ R+P+QNGVAERKNRT++EMARSML K LP E WAE VA +V+LLN SPT
Sbjct: 613 NGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPT 672
Query: 184 KAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLI---DCSKLDKKSEKYIFVGYSGETKGY 354
K+V TP EAW RKP VSHL++FGSIA++ + SKLD KSEKYIF+GY +KGY
Sbjct: 673 KSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGY 732
Query: 355 RLYNPENGKLII 390
+LYNP+ K II
Sbjct: 733 KLYNPDTKKTII 744
>XP_013688817.1 PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
napus]
Length = 2682
Score = 172 bits (435), Expect = 4e-47
Identities = 85/132 (64%), Positives = 102/132 (77%), Gaps = 3/132 (2%)
Frame = +1
Query: 4 NGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISPT 183
NGI+RQLT+ RTP+QNGVAERKNRT++EMARSML K LP E WAE VA +V++ N SPT
Sbjct: 621 NGIRRQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKELWAEAVACAVYISNRSPT 680
Query: 184 KAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLI---DCSKLDKKSEKYIFVGYSGETKGY 354
K+V TP EAW RKP VSHL++FGSIA++ + SKLD KSEKYIF+GY +KGY
Sbjct: 681 KSVLEKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDANSKGY 740
Query: 355 RLYNPENGKLII 390
+LYNPE K II
Sbjct: 741 KLYNPETKKTII 752
Score = 172 bits (435), Expect = 4e-47
Identities = 85/132 (64%), Positives = 102/132 (77%), Gaps = 3/132 (2%)
Frame = +1
Query: 4 NGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISPT 183
NGI+RQLT+ RTP+QNGVAERKNRT++EMARSML K LP E WAE VA +V++ N SPT
Sbjct: 1960 NGIRRQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKELWAEAVACAVYISNRSPT 2019
Query: 184 KAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLI---DCSKLDKKSEKYIFVGYSGETKGY 354
K+V TP EAW RKP VSHL++FGSIA++ + SKLD KSEKYIF+GY +KGY
Sbjct: 2020 KSVLEKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDANSKGY 2079
Query: 355 RLYNPENGKLII 390
+LYNPE K II
Sbjct: 2080 KLYNPETKKTII 2091
>CAB75469.1 copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 171 bits (434), Expect = 5e-47
Identities = 84/132 (63%), Positives = 103/132 (78%), Gaps = 3/132 (2%)
Frame = +1
Query: 4 NGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISPT 183
NGI+RQLT+ R+P+QNGVAERKNRT++EMARSML K LP E WAE VA +V+LLN SPT
Sbjct: 613 NGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPT 672
Query: 184 KAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLI---DCSKLDKKSEKYIFVGYSGETKGY 354
K+V TP EAW RKP VSHL++FGSIA++ + +KLD KSEKYIF+GY +KGY
Sbjct: 673 KSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGY 732
Query: 355 RLYNPENGKLII 390
+LYNP+ K II
Sbjct: 733 KLYNPDTKKTII 744
>CAB71063.1 copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 171 bits (433), Expect = 7e-47
Identities = 84/132 (63%), Positives = 102/132 (77%), Gaps = 3/132 (2%)
Frame = +1
Query: 4 NGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISPT 183
NGI+RQLT+ R+P+QNGV ERKNRT++EMARSML K LP E WAE VA +V+LLN SPT
Sbjct: 613 NGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPT 672
Query: 184 KAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLI---DCSKLDKKSEKYIFVGYSGETKGY 354
K+V TP EAW RKP VSHL++FGSIA++ + SKLD KSEKYIF+GY +KGY
Sbjct: 673 KSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGY 732
Query: 355 RLYNPENGKLII 390
+LYNP+ K II
Sbjct: 733 KLYNPDTKKTII 744
>AAD50001.1 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 171 bits (433), Expect = 7e-47
Identities = 84/132 (63%), Positives = 102/132 (77%), Gaps = 3/132 (2%)
Frame = +1
Query: 4 NGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISPT 183
NGI+RQLT+ R+P+QNGV ERKNRT++EMARSML K LP E WAE VA +V+LLN SPT
Sbjct: 613 NGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPT 672
Query: 184 KAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLI---DCSKLDKKSEKYIFVGYSGETKGY 354
K+V TP EAW RKP VSHL++FGSIA++ + SKLD KSEKYIF+GY +KGY
Sbjct: 673 KSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGY 732
Query: 355 RLYNPENGKLII 390
+LYNP+ K II
Sbjct: 733 KLYNPDTKKTII 744
>KYP66219.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1033
Score = 171 bits (432), Expect = 9e-47
Identities = 83/132 (62%), Positives = 103/132 (78%), Gaps = 3/132 (2%)
Frame = +1
Query: 4 NGIQRQLTMRRTPEQNGVAERKNRTVVEMARSMLSEKGLPNEFWAETVATSVFLLNISPT 183
NGI+RQLT+ R+P+QNGVAERKNRT++EMARSML K LP EFWAE VA +V+L N SPT
Sbjct: 545 NGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPT 604
Query: 184 KAVRNMTPYEAWWNRKPNVSHLKIFGSIAYSLI---DCSKLDKKSEKYIFVGYSGETKGY 354
++V TP EAW RKP +SHL++FGSIA+ + SKLD KSEKYIF+GY +KGY
Sbjct: 605 RSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGY 664
Query: 355 RLYNPENGKLII 390
+LYNP++ K II
Sbjct: 665 KLYNPDSRKTII 676