BLASTX nr result
ID: Panax25_contig00040267
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00040267
(458 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017229501.1 PREDICTED: F-box protein At3g07870 [Daucus carota... 64 5e-17
XP_017257437.1 PREDICTED: F-box protein At3g07870-like [Daucus c... 72 2e-15
XP_017252188.1 PREDICTED: F-box protein At3g07870-like [Daucus c... 52 2e-09
XP_017234898.1 PREDICTED: F-box protein CPR30-like [Daucus carot... 45 6e-08
XP_015165811.1 PREDICTED: F-box/kelch-repeat protein At3g06240-l... 48 5e-07
XP_017215652.1 PREDICTED: F-box protein At3g07870-like isoform X... 43 5e-06
XP_017215653.1 PREDICTED: F-box protein At3g07870-like isoform X... 43 5e-06
>XP_017229501.1 PREDICTED: F-box protein At3g07870 [Daucus carota subsp. sativus]
KZN11645.1 hypothetical protein DCAR_004301 [Daucus
carota subsp. sativus]
Length = 372
Score = 64.3 bits (155), Expect(2) = 5e-17
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = -2
Query: 457 GNKECWTKEVVIQEHSARVLYEMVHIIKVLKDGTILMLFRDDFMFT 320
G KE W+KE++I + S +LYE+VH +KV KD TILMLFR+DF+FT
Sbjct: 282 GMKESWSKEIIIPDDSTGLLYEIVHTLKVFKDETILMLFRNDFLFT 327
Score = 50.4 bits (119), Expect(2) = 5e-17
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = -1
Query: 332 FYVHHHPGNKTFIVLDILGADNGGTFDALVHVPSFIALKNFVLENVSV 189
F +HPGNKT +LD TFDA+V+VPSFI L++F E VSV
Sbjct: 324 FLFTYHPGNKTLQILDNFQRGVFDTFDAMVYVPSFITLRSFTSEKVSV 371
>XP_017257437.1 PREDICTED: F-box protein At3g07870-like [Daucus carota subsp.
sativus] KZM91537.1 hypothetical protein DCAR_021098
[Daucus carota subsp. sativus]
Length = 373
Score = 71.6 bits (174), Expect(2) = 2e-15
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = -2
Query: 457 GNKECWTKEVVIQEHSARVLYEMVHIIKVLKDGTILMLFRDDFMFT 320
G KE WTKEVVI+E+ AR L EMVH++KV DG+ILMLFRDDFMFT
Sbjct: 294 GLKESWTKEVVIRENHARPLDEMVHVLKVFMDGSILMLFRDDFMFT 339
Score = 38.1 bits (87), Expect(2) = 2e-15
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -1
Query: 332 FYVHHHPGNKTFIVLDILGADNGGTFDALVHVPSFIAL 219
F +HPG KT L+I + G FDA+++VPSFI L
Sbjct: 336 FMFTYHPGTKTVQELEIFRDPSRGIFDAMLYVPSFIRL 373
>XP_017252188.1 PREDICTED: F-box protein At3g07870-like [Daucus carota subsp.
sativus] KZM93157.1 hypothetical protein DCAR_016402
[Daucus carota subsp. sativus]
Length = 379
Score = 52.0 bits (123), Expect(2) = 2e-09
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = -2
Query: 457 GNKECWTKEVVIQEHSARVLYEMVHIIKVLKDGTILMLFRDDFMFT 320
G K CW KE+VI R LY+ VH++ VL+DG+ILM+ + MFT
Sbjct: 289 GLKACWVKEIVINNDFHRPLYKTVHVLTVLRDGSILMVAHNGHMFT 334
Score = 37.0 bits (84), Expect(2) = 2e-09
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = -1
Query: 329 YVHHHPGNKTFIVLDILGADNGGTFDALVHVPSFIALKNFVLENVSV 189
+ +HH GNKT LD+ + + +V+VPSFI L++F+ E V +
Sbjct: 333 FTYHH-GNKTLQQLDLSWTSDFSICNVMVYVPSFIRLRSFMSERVLI 378
>XP_017234898.1 PREDICTED: F-box protein CPR30-like [Daucus carota subsp. sativus]
KZN05465.1 hypothetical protein DCAR_006302 [Daucus
carota subsp. sativus]
Length = 487
Score = 45.4 bits (106), Expect(2) = 6e-08
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = -2
Query: 457 GNKECWTKEVVIQEHSARVLYEMVHIIKVLKDGTILMLFRDDFMFT 320
G KE W+KE++IQE + + +++KVLKDG+ILML + +FT
Sbjct: 397 GVKESWSKEIIIQELNFGLHCRTFYVLKVLKDGSILMLCSANLLFT 442
Score = 38.5 bits (88), Expect(2) = 6e-08
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = -1
Query: 320 HHPGNKTFIVLDILGADNGGTFDALVHVPSFIALKNFVLENVS 192
+HPG K + V+ + A V+VPSFI+LK+F+LENVS
Sbjct: 443 YHPGTKIWQVVPCFKEYEIQSMYASVYVPSFISLKSFMLENVS 485
>XP_015165811.1 PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
tuberosum]
Length = 373
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 21/48 (43%), Positives = 35/48 (72%), Gaps = 3/48 (6%)
Frame = -2
Query: 457 GNKECWTKEVVIQ---EHSARVLYEMVHIIKVLKDGTILMLFRDDFMF 323
G + W K++VI E++ + YEM++++KVL+DG +L L+RDDF+F
Sbjct: 284 GVTDSWVKQIVINNAPEYNDWLSYEMINLLKVLEDGQVLFLWRDDFLF 331
Score = 32.7 bits (73), Expect(2) = 5e-07
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = -1
Query: 332 FYVHHHPGNKTFIVLDILGADNGGTFDALVHVPSFIALKNFVLENVSV 189
F HHP KT +LD+ G A HV S ++LKNF +E V+V
Sbjct: 329 FLFLHHPVKKTLKMLDVC----EGNLLACGHVSSSLSLKNFEVEVVNV 372
>XP_017215652.1 PREDICTED: F-box protein At3g07870-like isoform X1 [Daucus carota
subsp. sativus]
Length = 390
Score = 43.1 bits (100), Expect(2) = 5e-06
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = -2
Query: 457 GNKECWTKEVVIQEHSARVLYEMVHIIKVLKDGTILMLFRDDFMFT 320
G KE WTKE+VI++ + YE+V + LK G+ILM+ F+FT
Sbjct: 303 GIKESWTKEIVIKDKPGWLQYEIVQPLISLKSGSILMVCYGHFLFT 348
Score = 34.3 bits (77), Expect(2) = 5e-06
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1
Query: 257 FDALVHVPSFIALKNFVLENVSV 189
+DA+V+VPSFI LK+F+LE V V
Sbjct: 367 YDAMVYVPSFIRLKSFMLEKVLV 389
>XP_017215653.1 PREDICTED: F-box protein At3g07870-like isoform X2 [Daucus carota
subsp. sativus]
Length = 389
Score = 43.1 bits (100), Expect(2) = 5e-06
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = -2
Query: 457 GNKECWTKEVVIQEHSARVLYEMVHIIKVLKDGTILMLFRDDFMFT 320
G KE WTKE+VI++ + YE+V + LK G+ILM+ F+FT
Sbjct: 302 GIKESWTKEIVIKDKPGWLQYEIVQPLISLKSGSILMVCYGHFLFT 347
Score = 34.3 bits (77), Expect(2) = 5e-06
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1
Query: 257 FDALVHVPSFIALKNFVLENVSV 189
+DA+V+VPSFI LK+F+LE V V
Sbjct: 366 YDAMVYVPSFIRLKSFMLEKVLV 388