BLASTX nr result
ID: Panax25_contig00040021
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00040021
(370 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAU40589.1 hypothetical protein LC_TR7371_c25_g1_i1_g.25010, par... 92 2e-20
JAU08363.1 Retrovirus-related Pol polyprotein from transposon TN... 92 2e-19
CDP15021.1 unnamed protein product [Coffea canephora] 82 1e-15
XP_015081422.1 PREDICTED: uncharacterized protein LOC107025070 [... 69 2e-12
XP_016498615.1 PREDICTED: uncharacterized protein LOC107817324 [... 64 2e-09
OMP03432.1 Integrase, catalytic core [Corchorus capsularis] 64 3e-09
XP_019236203.1 PREDICTED: uncharacterized protein LOC109216496 [... 63 4e-09
XP_017181790.1 PREDICTED: uncharacterized protein LOC108170853 [... 62 7e-09
KYP60150.1 Retrovirus-related Pol polyprotein from transposon TN... 60 3e-08
XP_008347143.1 PREDICTED: uncharacterized protein LOC103410171 [... 60 6e-08
OMO67597.1 hypothetical protein COLO4_30078 [Corchorus olitorius] 57 8e-08
KYP49539.1 Retrovirus-related Pol polyprotein from transposon TN... 58 3e-07
KYP49538.1 Retrovirus-related Pol polyprotein from transposon TN... 58 3e-07
ONK61043.1 uncharacterized protein A4U43_C08F25650 [Asparagus of... 56 3e-07
CAN73532.1 hypothetical protein VITISV_012827 [Vitis vinifera] 57 6e-07
CAN71427.1 hypothetical protein VITISV_027864 [Vitis vinifera] 56 1e-06
OMO79399.1 Zinc finger, CCHC-type [Corchorus capsularis] 55 2e-06
XP_008386078.1 PREDICTED: uncharacterized protein LOC103448592 [... 54 4e-06
XP_016546053.1 PREDICTED: uncharacterized protein LOC107846093 [... 54 7e-06
CBI36427.3 unnamed protein product, partial [Vitis vinifera] 53 9e-06
>JAU40589.1 hypothetical protein LC_TR7371_c25_g1_i1_g.25010, partial [Noccaea
caerulescens]
Length = 248
Score = 92.4 bits (228), Expect = 2e-20
Identities = 49/109 (44%), Positives = 64/109 (58%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWEHCLSITADQSTIVTSARTDVNA 169
C RCG+ GH K +CRVKL N+A K SE +W C ++ A S T+
Sbjct: 149 CYRCGKLGHFKKDCRVKLKET--NMAESKCHSEYEEWGKCFTVEAASSGTSTTK------ 200
Query: 168 SIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPVEK 22
+ N+WIVDSG SHH T N+ LFS ++ H GK+ I TADNS++ VEK
Sbjct: 201 --NIGNDWIVDSGCSHHITGNEKLFSSLQHHEGKEAIITADNSIHRVEK 247
>JAU08363.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Noccaea caerulescens]
Length = 1335
Score = 92.4 bits (228), Expect = 2e-19
Identities = 49/109 (44%), Positives = 64/109 (58%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWEHCLSITADQSTIVTSARTDVNA 169
C RCG+ GH K +CRVKL N+A K SE +W C ++ A S T+
Sbjct: 248 CYRCGKLGHFKKDCRVKLKET--NMAESKCHSEYEEWGKCFTVEAASSGTSTTK------ 299
Query: 168 SIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPVEK 22
+ N+WIVDSG SHH T N+ LFS ++ H GK+ I TADNS++ VEK
Sbjct: 300 --NIGNDWIVDSGCSHHITGNEKLFSSLQHHEGKEAIITADNSIHRVEK 346
>CDP15021.1 unnamed protein product [Coffea canephora]
Length = 544
Score = 81.6 bits (200), Expect = 1e-15
Identities = 41/111 (36%), Positives = 58/111 (52%)
Frame = -2
Query: 354 VVCNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWEHCLSITADQSTIVTSARTDV 175
++C RC +PGHI NC+V + A EKD+ W C + + D
Sbjct: 238 IICYRCHKPGHIMKNCKVSIQETNVAAA-EKDDQSDEDWGKCF--------VAETKDIDA 288
Query: 174 NASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPVEK 22
ASI+ +EWIVDSG HH T ++S FS+ + G+ I ADNS++ V K
Sbjct: 289 LASINLEDEWIVDSGCGHHLTGDESKFSNFHQYNGRHAIVIADNSIHSVSK 339
>XP_015081422.1 PREDICTED: uncharacterized protein LOC107025070 [Solanum pennellii]
Length = 138
Score = 68.9 bits (167), Expect = 2e-12
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = -2
Query: 243 KWEHCLSITADQSTIVTSARTDVN-ASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGK 67
KWE C SI + + + VN A+ + EWIVDSG SHH T +DSLFS +R H G
Sbjct: 2 KWEQCFSIQIVEPKL---EQDFVNYANNNKREEWIVDSGCSHHVTGDDSLFSAMRDHHGD 58
Query: 66 KTIATADNSLYPVEKGHFEADI 1
+ I T DN YPVEKG + ++
Sbjct: 59 RVIITGDNLTYPVEKGVVKIEV 80
>XP_016498615.1 PREDICTED: uncharacterized protein LOC107817324 [Nicotiana tabacum]
Length = 557
Score = 63.9 bits (154), Expect = 2e-09
Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Frame = -2
Query: 342 RCGRPGHIKANCRVKLMVAGANVAHEK----DESEQSKWEHCLSITADQSTIVTSARTDV 175
RCG+ GHIK CR K N+A K +E ++ W C TA+ I +
Sbjct: 256 RCGKVGHIKRYCRAK----ECNIAQIKKVVEEEEKEEDWGKCF--TAETRAI------NA 303
Query: 174 NASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSL 37
ASI++ WIVD G HH T + S FS R + G I TADN++
Sbjct: 304 MASINFERNWIVDLGCGHHLTRDQSKFSTFREYNGHDVIVTADNTV 349
>OMP03432.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1347
Score = 63.5 bits (153), Expect = 3e-09
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWEHCLSITADQSTIVTSART---- 181
C CG+ GH +CR K A + W+ +S ++ + +A T
Sbjct: 263 CYSCGKVGHFARDCRFKQAQGNAATTSRGGIDSEEDWDFQVSFAVEEPEELATACTVEQE 322
Query: 180 -----DVNASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPV 28
+ I++NN+W+VDSG S+H T + S+ + GK+ + TA+NS P+
Sbjct: 323 QETALSTVSKINFNNDWLVDSGCSNHMTGDKEKLSNTSTYAGKRMVVTANNSKLPI 378
>XP_019236203.1 PREDICTED: uncharacterized protein LOC109216496 [Nicotiana
attenuata]
Length = 297
Score = 62.8 bits (151), Expect = 4e-09
Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWEHCLSITADQSTIVTSARTDVNA 169
C RCG+ GHIK CRVK N+A K +E+ + E D T+ +NA
Sbjct: 201 CYRCGKLGHIKRYCRVK----ERNIAQIKKVTEEEEKEE------DWGKGFTAETRAINA 250
Query: 168 --SIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATAD 46
SI++ +WIVDSG HH T + S FS + G I TAD
Sbjct: 251 MASINFERDWIVDSGCGHHLTGDQSKFSTFHEYNGHDVIVTAD 293
>XP_017181790.1 PREDICTED: uncharacterized protein LOC108170853 [Malus domestica]
Length = 248
Score = 61.6 bits (148), Expect = 7e-09
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVA--HEKDESEQSKWEHCLSITADQSTIVTSARTDV 175
C CG+ GH+ +C K +N A K SE L T ++ +T +
Sbjct: 145 CYNCGKKGHMAKDCWTKKEPVESNTATSSSKKNSEDGWDAEALFATEEEELALTVTTPE- 203
Query: 174 NASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNS 40
IDYNN+WIVDSG S+H T + ++ + G + + TADNS
Sbjct: 204 --RIDYNNDWIVDSGCSNHMTGDKQKLQNLSEYKGSRVVVTADNS 246
>KYP60150.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 493
Score = 60.5 bits (145), Expect = 3e-08
Identities = 33/107 (30%), Positives = 59/107 (55%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWEHCLSITADQSTIVTSARTDVNA 169
C CG+ GH C + G V ++DE+++ +W+ S +S R +V+
Sbjct: 281 CYNCGKKGHYVRECWAR-KEEGNTVTLKQDENKE-EWDVHASYAVKESR-----RDEVSE 333
Query: 168 SIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPV 28
+I+Y+++WIVDSG S+H T + F + + G++ + TA+NS P+
Sbjct: 334 AINYDDDWIVDSGCSNHMTGDKGKFLSMSEYKGERVVVTANNSKMPI 380
>XP_008347143.1 PREDICTED: uncharacterized protein LOC103410171 [Malus domestica]
Length = 508
Score = 59.7 bits (143), Expect = 6e-08
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKD-ESEQSKWEHCLSITADQSTIVTSARTDVN 172
C CG+ GH +C K +N A E+ + W+ ++ + + T
Sbjct: 260 CYNCGKMGHXAKDCWTKXKPVESNTATSSSKENSEDGWDAEALFATEEEELALTVTTQER 319
Query: 171 ASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPV 28
IDY N+WIVDSG +H T + ++ + G + + TADNS P+
Sbjct: 320 --IDYKNDWIVDSGCFNHMTGDKQKLQNLSEYKGGRVVVTADNSRLPI 365
>OMO67597.1 hypothetical protein COLO4_30078 [Corchorus olitorius]
Length = 138
Score = 57.0 bits (136), Expect = 8e-08
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWEHCLSITADQS-------TIVTS 190
C G+ H CR K A + WE +S D+ T+
Sbjct: 10 CYNYGKICHFTRGCRFKQAQGNAATTSRGKNGNEEDWEFQVSFAVDEPEEHATSFTVEPE 69
Query: 189 ARTDVN--ASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPV 28
T ++ + ID++N+W+VDSG S H T S++ + GK+ + TA+NS P+
Sbjct: 70 QETALSTVSKIDFSNDWLVDSGCSKHMTGEKEKLSNMSTYTGKRMVVTANNSKLPI 125
>KYP49539.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 477
Score = 57.8 bits (138), Expect = 3e-07
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 20/127 (15%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWE--------------------HC 229
C CG+ GH C + G V ++DE+++ +W+ C
Sbjct: 245 CYNCGKKGHYVRECWAR-KEEGNTVTLKQDENKE-EWDVHASYAVKESRRDEGVEIVASC 302
Query: 228 LSITADQSTIVTSARTDVNASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATA 49
+ ++ST+VT V+ +I+Y+++WIVDSG S+H T + F + + G++ + TA
Sbjct: 303 MDELVEESTLVT-----VSEAINYDDDWIVDSGCSNHMTGDKGKFLSMSEYKGERVVVTA 357
Query: 48 DNSLYPV 28
+NS P+
Sbjct: 358 NNSKMPI 364
>KYP49538.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan] KYP49541.1 Retrovirus-related Pol
polyprotein from transposon TNT 1-94 [Cajanus cajan]
KYP49543.1 Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Cajanus cajan] KYP49555.1
Retrovirus-related Pol polyprotein from transposon TNT
1-94 [Cajanus cajan]
Length = 502
Score = 57.8 bits (138), Expect = 3e-07
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 20/127 (15%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWE--------------------HC 229
C CG+ GH C + G V ++DE+++ +W+ C
Sbjct: 270 CYNCGKKGHYVRECWAR-KEEGNTVTLKQDENKE-EWDVHASYAVKESRRDEGVEIVASC 327
Query: 228 LSITADQSTIVTSARTDVNASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATA 49
+ ++ST+VT V+ +I+Y+++WIVDSG S+H T + F + + G++ + TA
Sbjct: 328 MDELVEESTLVT-----VSEAINYDDDWIVDSGCSNHMTGDKGKFLSMSEYKGERVVVTA 382
Query: 48 DNSLYPV 28
+NS P+
Sbjct: 383 NNSKMPI 389
>ONK61043.1 uncharacterized protein A4U43_C08F25650 [Asparagus officinalis]
Length = 181
Score = 56.2 bits (134), Expect = 3e-07
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = -2
Query: 369 DCHVKVVCNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQ 247
+C VK+VC RC + GHIK NCRVKL+ + N+AHE E ++
Sbjct: 139 NCRVKIVCKRCEKSGHIKPNCRVKLVESDVNIAHEVKEEDE 179
>CAN73532.1 hypothetical protein VITISV_012827 [Vitis vinifera]
Length = 1194
Score = 57.0 bits (136), Expect = 6e-07
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWE-HCLSITADQSTIVTSARTDVN 172
C CG+ GH+ +C K + +N A + E E W+ + +S + + +
Sbjct: 260 CYNCGKKGHMAKDCWSKKGLVESNAATSESEBE---WDAQAFFVAXGESXFIATT----S 312
Query: 171 ASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPV 28
IDY +WI+DSG S+H T + D+ + G+ + T +NS P+
Sbjct: 313 EQIDYEKDWIIDSGCSNHMTGDKEKLXDLSEYKGRHMVVTXNNSKJPI 360
>CAN71427.1 hypothetical protein VITISV_027864 [Vitis vinifera]
Length = 1300
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/107 (28%), Positives = 48/107 (44%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWEHCLSITADQSTIVTSARTDVNA 169
C C + GH+ +C K + +N K E E +I TS +
Sbjct: 260 CYNCXKKGHMAKDCWSKKGLVESNATTSKSEDEWDAQAFFAAIGESAFIATTSEQ----- 314
Query: 168 SIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPV 28
IDY +WI+DSG S+H T + D+ + G+ + TA+NS P+
Sbjct: 315 -IDYEKDWIIDSGCSNHMTGDKEKLQDLSEYKGRHMVVTANNSKLPI 360
>OMO79399.1 Zinc finger, CCHC-type [Corchorus capsularis]
Length = 306
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWEHCLSITADQSTIVTSART---- 181
C CG+ GH + K A + W+ +S ++ + +A T
Sbjct: 112 CYNCGKVGHFARDYWFKQAQGNAATTSRGGNDSEEDWDFQVSFAVEEPEELATACTVEPE 171
Query: 180 -----DVNASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPV 28
+ + ID++N+W+VDS S+H T + S++ + GK+ + TA+NS P+
Sbjct: 172 QETALSMVSKIDFSNDWLVDSYCSNHMTGDKEKLSNMSTYAGKRMVVTANNSKLPI 227
>XP_008386078.1 PREDICTED: uncharacterized protein LOC103448592 [Malus domestica]
Length = 455
Score = 54.3 bits (129), Expect = 4e-06
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKD-ESEQSKWEHCLSITADQSTIVTSARTDVN 172
C + GH+ +C K +N A E+ + W+ ++ + + T
Sbjct: 260 CYNYRKMGHMAKDCWTKKKPVESNTATSSSKENSEDGWDAEALFATEEEELALTVTTQ-- 317
Query: 171 ASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPV 28
IDY N+WIVDSG S+H T + ++ + G + TADNS P+
Sbjct: 318 EQIDYKNDWIVDSGCSNHMTGDKQKLQNLSEYKGGHVVVTADNSRLPI 365
>XP_016546053.1 PREDICTED: uncharacterized protein LOC107846093 [Capsicum annuum]
Length = 315
Score = 53.5 bits (127), Expect = 7e-06
Identities = 30/107 (28%), Positives = 49/107 (45%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWEHCLSITADQSTIVTSARTDVNA 169
C + G+ GH+ CR K NV E E W+ A++ + + + +
Sbjct: 195 CYKYGKKGHMVKTCRSKKKSVKGNVVTSNSEEE---WDAEAFFAAEEDELALTVT--IFS 249
Query: 168 SIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPV 28
IDY N+WIVDSG S+ T + ++ + G + A+NS P+
Sbjct: 250 KIDYENDWIVDSGCSNRMTGDKDKLKNLSKYKGSCVVVIANNSKLPI 296
>CBI36427.3 unnamed protein product, partial [Vitis vinifera]
Length = 216
Score = 52.8 bits (125), Expect = 9e-06
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = -2
Query: 348 CNRCGRPGHIKANCRVKLMVAGANVAHEKDESEQSKWEHCLSITA--DQSTIVTSARTDV 175
C C + H+ +C K + +N A K E E W+ + A + + I T++
Sbjct: 65 CYNCRKKCHMAKDCWSKKGLVESNAATSKSEDE---WDAQVFFAAIGESAFIATTSE--- 118
Query: 174 NASIDYNNEWIVDSGFSHHAT*NDSLFSDVRPHCGKKTIATADNSLYPV 28
IDY +WI+DSG S+H T + D+ + G+ + T +NS P+
Sbjct: 119 --KIDYEKDWIIDSGCSNHMTGDKEKLQDLSEYKGRHMVVTVNNSKLPI 165