BLASTX nr result
ID: Panax25_contig00039808
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax25_contig00039808 (573 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_002325139.2 hypothetical protein POPTR_0018s11780g [Populus t... 36 1e-06 >XP_002325139.2 hypothetical protein POPTR_0018s11780g [Populus trichocarpa] EEF03704.2 hypothetical protein POPTR_0018s11780g [Populus trichocarpa] Length = 549 Score = 35.8 bits (81), Expect(4) = 1e-06 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = +1 Query: 223 EMYGNHQGFWLGSLKSEKEAA 285 ++Y NHQ WLG+ KSEKEAA Sbjct: 61 QIYANHQRIWLGTFKSEKEAA 81 Score = 30.0 bits (66), Expect(4) = 1e-06 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +1 Query: 418 VGKAS*FVIPKKYASSYFPCI 480 VGK + VIPKKYA YFP I Sbjct: 177 VGKLNRIVIPKKYAIKYFPHI 197 Score = 26.9 bits (58), Expect(4) = 1e-06 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = +3 Query: 531 FRYCYWRKSSSQSY 572 FRYCYW+ SSQSY Sbjct: 221 FRYCYWK--SSQSY 232 Score = 25.0 bits (53), Expect(4) = 1e-06 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 16/56 (28%) Frame = +2 Query: 287 EVVLHMINRVWYQ---RS*LTLCQQHWKGEI-------------LCKRLFDKELTP 406 EVVL+MI YQ + C Q + E+ CK+LF KELTP Sbjct: 119 EVVLNMIKDGTYQCKFANFTRTCSQSVETELSLKLMMPQSNQGLTCKQLFQKELTP 174