BLASTX nr result

ID: Panax25_contig00039808 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00039808
         (573 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002325139.2 hypothetical protein POPTR_0018s11780g [Populus t...    36   1e-06

>XP_002325139.2 hypothetical protein POPTR_0018s11780g [Populus trichocarpa]
           EEF03704.2 hypothetical protein POPTR_0018s11780g
           [Populus trichocarpa]
          Length = 549

 Score = 35.8 bits (81), Expect(4) = 1e-06
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +1

Query: 223 EMYGNHQGFWLGSLKSEKEAA 285
           ++Y NHQ  WLG+ KSEKEAA
Sbjct: 61  QIYANHQRIWLGTFKSEKEAA 81



 Score = 30.0 bits (66), Expect(4) = 1e-06
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +1

Query: 418 VGKAS*FVIPKKYASSYFPCI 480
           VGK +  VIPKKYA  YFP I
Sbjct: 177 VGKLNRIVIPKKYAIKYFPHI 197



 Score = 26.9 bits (58), Expect(4) = 1e-06
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 531 FRYCYWRKSSSQSY 572
           FRYCYW+  SSQSY
Sbjct: 221 FRYCYWK--SSQSY 232



 Score = 25.0 bits (53), Expect(4) = 1e-06
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 16/56 (28%)
 Frame = +2

Query: 287 EVVLHMINRVWYQ---RS*LTLCQQHWKGEI-------------LCKRLFDKELTP 406
           EVVL+MI    YQ    +    C Q  + E+              CK+LF KELTP
Sbjct: 119 EVVLNMIKDGTYQCKFANFTRTCSQSVETELSLKLMMPQSNQGLTCKQLFQKELTP 174


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