BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00039625
         (376 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017236137.1 PREDICTED: polyadenylation and cleavage factor ho...    70   2e-11
XP_019078215.1 PREDICTED: polyadenylation and cleavage factor ho...    64   2e-09
XP_010655357.1 PREDICTED: polyadenylation and cleavage factor ho...    64   2e-09
XP_017236138.1 PREDICTED: polyadenylation and cleavage factor ho...    54   9e-06
XP_006449074.1 hypothetical protein CICLE_v10014158mg [Citrus cl...    54   1e-05

>XP_017236137.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Daucus carota subsp. sativus] KZN07292.1 hypothetical
           protein DCAR_008129 [Daucus carota subsp. sativus]
          Length = 986

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 46/124 (37%), Positives = 61/124 (49%)
 Frame = +2

Query: 2   RGSSTFALKMSSSTFEPLNAEXXXXXXXXXXXXWPHGKTQKPYLLPSLATLPLQKQIWSH 181
           RGS  FA +MSS T E LN E                  QK   +  LA+ PLQK++WS 
Sbjct: 565 RGSLDFASRMSSLTRESLNPEVL--------------SAQKSNPVSQLASYPLQKRMWSQ 610

Query: 182 FDSMNATKANIDQGLNKSFLGQQQLDSAEHKAATNQLPQFHHQQAVPISLNQQNQAHNAV 361
            + ++A  +N DQG+  SF            +A N   QF ++Q  P SL+QQN   N V
Sbjct: 611 MEPVSAGYSNADQGMKNSF------------SAPNHQAQFSNRQVGPNSLHQQNHTQNVV 658

Query: 362 LQPP 373
           L+PP
Sbjct: 659 LRPP 662


>XP_019078215.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Vitis vinifera]
          Length = 1033

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 45/119 (37%), Positives = 59/119 (49%)
 Frame = +2

Query: 14  TFALKMSSSTFEPLNAEXXXXXXXXXXXXWPHGKTQKPYLLPSLATLPLQKQIWSHFDSM 193
           T A +M SS+   +N E            WP     K +L P L+ LP  KQI + F+ M
Sbjct: 611 TVASRMGSSSLNSMNVEVQSAAAPASTGMWPPVNVHKTHLPPLLSNLPQTKQIRNQFNLM 670

Query: 194 NATKANIDQGLNKSFLGQQQLDSAEHKAATNQLPQFHHQQAVPISLNQQNQAHNAVLQP 370
           NAT A ++Q  NKS L   +LDS        +LPQ  ++QA  I LN +NQ     LQP
Sbjct: 671 NATTAVVNQDPNKS-LFLPELDS--------KLPQMANRQAGSIPLNGKNQTQVTRLQP 720


>XP_010655357.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Vitis vinifera]
          Length = 1046

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 45/119 (37%), Positives = 59/119 (49%)
 Frame = +2

Query: 14  TFALKMSSSTFEPLNAEXXXXXXXXXXXXWPHGKTQKPYLLPSLATLPLQKQIWSHFDSM 193
           T A +M SS+   +N E            WP     K +L P L+ LP  KQI + F+ M
Sbjct: 611 TVASRMGSSSLNSMNVEVQSAAAPASTGMWPPVNVHKTHLPPLLSNLPQTKQIRNQFNLM 670

Query: 194 NATKANIDQGLNKSFLGQQQLDSAEHKAATNQLPQFHHQQAVPISLNQQNQAHNAVLQP 370
           NAT A ++Q  NKS L   +LDS        +LPQ  ++QA  I LN +NQ     LQP
Sbjct: 671 NATTAVVNQDPNKS-LFLPELDS--------KLPQMANRQAGSIPLNGKNQTQVTRLQP 720


>XP_017236138.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Daucus carota subsp. sativus]
          Length = 922

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 29/80 (36%), Positives = 43/80 (53%)
 Frame = +2

Query: 134 LPSLATLPLQKQIWSHFDSMNATKANIDQGLNKSFLGQQQLDSAEHKAATNQLPQFHHQQ 313
           +P  +   LQK++WS  + ++A  +N DQG+  SF            +A N   QF ++Q
Sbjct: 531 IPPSSQRNLQKRMWSQMEPVSAGYSNADQGMKNSF------------SAPNHQAQFSNRQ 578

Query: 314 AVPISLNQQNQAHNAVLQPP 373
             P SL+QQN   N VL+PP
Sbjct: 579 VGPNSLHQQNHTQNVVLRPP 598


>XP_006449074.1 hypothetical protein CICLE_v10014158mg [Citrus clementina]
           ESR62314.1 hypothetical protein CICLE_v10014158mg
           [Citrus clementina]
          Length = 975

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 33/82 (40%), Positives = 43/82 (52%)
 Frame = +2

Query: 101 WPHGKTQKPYLLPSLATLPLQKQIWSHFDSMNATKANIDQGLNKSFLGQQQLDSAEHKAA 280
           W      KP+L P     P QKQ  + FDS+NA  + ++QGL+KS      L ++E K  
Sbjct: 574 WAPMNLHKPHLPPGQPVYPQQKQTRTQFDSINAAGSILNQGLSKS------LYNSESKEL 627

Query: 281 TNQLPQFHHQQAVPISLNQQNQ 346
           +   PQ H Q A P   NQQNQ
Sbjct: 628 SLMKPQLHDQHATP---NQQNQ 646