BLASTX nr result

ID: Panax25_contig00039571 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00039571
         (499 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017222255.1 PREDICTED: scarecrow-like protein 18 [Daucus caro...    76   5e-13
XP_017221729.1 PREDICTED: DELLA protein RGL2-like [Daucus carota...    56   3e-06
XP_017216814.1 PREDICTED: DELLA protein RGA-like [Daucus carota ...    56   4e-06

>XP_017222255.1 PREDICTED: scarecrow-like protein 18 [Daucus carota subsp. sativus]
           KZM85573.1 hypothetical protein DCAR_027005 [Daucus
           carota subsp. sativus]
          Length = 579

 Score = 75.9 bits (185), Expect = 5e-13
 Identities = 65/194 (33%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
 Frame = +2

Query: 29  VREMFPLGQFYSNRIPNDYCYFMRDDSGEAAGNMAKQTEFYGTDQEWVESGNINLFHQNN 208
           V EMFP  Q  S  IPN++ Y  +D      GN  ++T++ G  +E  E  + NLF QN 
Sbjct: 2   VIEMFPSEQISSRCIPNEFGY-SKDYYFRKEGNAERKTQWNGI-EECEEWRSYNLFRQNT 59

Query: 209 TI----------------------------------QLCQEEHIKRTKIHSEISELIAPK 286
           T                                   QL  EE      IHSE  ELI  +
Sbjct: 60  TTQGNLFLSTKQQGLISSAEITNFDELCYDIKPLSSQLSLEELTNFATIHSEFQELITLQ 119

Query: 287 EEKSCTSSLASYGIQMNSEIELGLSD---CDVPSYD-TAACTKVDEKLSTKDFLGMAGEK 454
           E  S        GI++N+E + G +D    D+P YD T A   + E+LSTKDFL + GEK
Sbjct: 120 ESSS--------GIKLNNETKFGQADYEHFDLPIYDTTCANAGLSERLSTKDFLRLGGEK 171

Query: 455 FIQSTCISFDDLSV 496
           FIQS+   F++  +
Sbjct: 172 FIQSSSSVFNNFDL 185


>XP_017221729.1 PREDICTED: DELLA protein RGL2-like [Daucus carota subsp. sativus]
           KZM85572.1 hypothetical protein DCAR_027006 [Daucus
           carota subsp. sativus]
          Length = 546

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
 Frame = +2

Query: 215 QLCQEEHIKRTKIHSEISELIAPKEEKSCTSSLASYGI--QMNSEIELGLSDCDVPSYDT 388
           QL Q+E  K   IHSE+ EL AP++E+S  +SL+S+ I  +  S  E   S+        
Sbjct: 68  QLTQDECTKLRNIHSEMLELFAPEQERSSPTSLSSFRILNKCRSNFEEQNSEKVKVPDSE 127

Query: 389 AACTKVDEKLSTKDFLGMAGEKFIQSTCISFDDLSVL 499
            +C+KV  + S  + + +AGEKFI+S  +  DDLS L
Sbjct: 128 ISCSKVGGQ-SVIEIIQLAGEKFIKSRSLRIDDLSEL 163


>XP_017216814.1 PREDICTED: DELLA protein RGA-like [Daucus carota subsp. sativus]
           KZM86215.1 hypothetical protein DCAR_023349 [Daucus
           carota subsp. sativus]
          Length = 558

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
 Frame = +2

Query: 215 QLCQEEHIKRTKIHSEISELIAPKEEKSCTSSLASYGIQMNSE--------IELGLSDCD 370
           QL QEEH K   IHSE+ EL+AP+E++S  SSL+ + I  +S         +E+ +S  D
Sbjct: 81  QLSQEEHEKLRNIHSEVLELVAPEEDESSPSSLSPFRILSSSRSNFKGQNPVEVKVSGSD 140

Query: 371 VPSYDTAACTKVDEKLSTKDFLGMAGEKFIQSTCISFDD 487
           V      +  KV  + S  + + +AGE  IQS  +  DD
Sbjct: 141 V------SWPKVSSQ-SVNEIIRLAGENIIQSRSVKVDD 172


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