BLASTX nr result

ID: Panax25_contig00039454 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00039454
         (572 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015381977.1 PREDICTED: RNA-directed DNA polymerase homolog [C...    56   4e-06

>XP_015381977.1 PREDICTED: RNA-directed DNA polymerase homolog [Citrus sinensis]
          Length = 229

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
 Frame = -1

Query: 425 FCCLDIDLGFHASQSLHELSLVDNGSNHVVSLEQSSLHDL----LSYDFDSRSVYHQDGL 258
           FC L++ L F  S+   ++S++     H +      L +L    +    D +S YHQ  +
Sbjct: 22  FCTLNLYLDFQGSE---QISVLKRKDQHPIPRLDDMLDELHGSCVFSKIDLKSGYHQIRI 78

Query: 257 RDE------------LFACLVSSLRLAKALHTSMELLNYILNSFMGKFVILYFDDIPIFV 114
           R+             L+  LV    L+ A  T M L+N++L +F+GKFV++YFDDI I+ 
Sbjct: 79  REGDEWKTAFKTKYGLYEWLVMPFGLSNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYS 138

Query: 113 NTLGNSLACVEFV 75
             L   +  ++ V
Sbjct: 139 KGLDEHIEHLQSV 151


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