BLASTX nr result
ID: Panax25_contig00039392
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00039392
(521 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP63256.1 Retrovirus-related Pol polyprotein from transposon TN... 214 1e-67
KYP68962.1 Retrovirus-related Pol polyprotein from transposon TN... 219 3e-67
KZV32174.1 retrovirus-related Pol polyprotein from transposon TN... 226 4e-67
GAU22794.1 hypothetical protein TSUD_142340 [Trifolium subterran... 227 8e-67
KYP39385.1 Retrovirus-related Pol polyprotein from transposon TN... 225 1e-66
KYP33156.1 Retrovirus-related Pol polyprotein from transposon TN... 221 2e-66
GAU35153.1 hypothetical protein TSUD_217860 [Trifolium subterran... 224 2e-65
CAN79061.1 hypothetical protein VITISV_024577 [Vitis vinifera] 223 3e-64
AAG50698.1 copia-type polyprotein, putative [Arabidopsis thalian... 221 1e-63
CAB71063.1 copia-type polyprotein [Arabidopsis thaliana] 219 4e-63
AAD50001.1 Hypothetical protein [Arabidopsis thaliana] 219 4e-63
CAB75469.1 copia-type reverse transcriptase-like protein [Arabid... 219 7e-63
AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana] 218 1e-62
KYP43625.1 Retrovirus-related Pol polyprotein from transposon TN... 216 4e-62
KYP41863.1 Retrovirus-related Pol polyprotein from transposon TN... 210 7e-62
OMO68768.1 Integrase, catalytic core [Corchorus capsularis] 216 7e-62
KYP57480.1 Retrovirus-related Pol polyprotein from transposon TN... 199 1e-61
XP_013688817.1 PREDICTED: uncharacterized protein LOC106392554, ... 215 1e-61
XP_009356290.1 PREDICTED: uncharacterized protein LOC103947158 [... 212 2e-61
JAU74580.1 Retrovirus-related Pol polyprotein from transposon TN... 203 4e-61
>KYP63256.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 231
Score = 214 bits (545), Expect = 1e-67
Identities = 100/173 (57%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Frame = -1
Query: 521 LPFPKN-SWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
LPF +WRAK LEL+H+DICGPMRT SL+N RYFILF+D+++RM W+YF+ KS F
Sbjct: 26 LPFSTGKAWRAKDLLELIHADICGPMRTSSLHNNRYFILFIDNFSRMTWVYFIKAKSEVF 85
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
IF + K L +KQSG Q+K+L++DRG E+ F ++ GI+RQ+TV+ SPQQN V++
Sbjct: 86 GIFKKLKTLVKKQSGKQIKVLRSDRGKEYTSHEFDKLCEDEGIERQITVAYSPQQNEVSE 145
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
RKN T++EM+RSML+EK LPN WAEA++T++YILNR PTK V++KTP EAW+
Sbjct: 146 RKNHTVMEMSRSMLKEKGLPNTFWAEAVYTAVYILNRCPTKVVQDKTPIEAWS 198
>KYP68962.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 401
Score = 219 bits (557), Expect = 3e-67
Identities = 100/166 (60%), Positives = 134/166 (80%)
Frame = -1
Query: 503 SWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AFSIFLQFK 324
+WRAK LEL+H+DICGPMRT SL+N RYFILF+DD++RM W+YF+ EKS F I +FK
Sbjct: 90 TWRAKNLLELIHTDICGPMRTSSLHNNRYFILFIDDFSRMTWVYFIKEKSEVFGILKKFK 149
Query: 323 ALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAKRKNRTIV 144
L EKQSG Q+K+L++DRG E+ F + ++ GI+++LTVS SPQQNGV++RKNRT++
Sbjct: 150 TLVEKQSGKQIKVLRSDRGKEYTSHEFDKFCEDEGIEQKLTVSYSPQQNGVSERKNRTVM 209
Query: 143 EMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
EMARSML+EK LPN WAE ++T++YILNR PT+ V++KT EAW+
Sbjct: 210 EMARSMLKEKGLPNTFWAEVVYTAVYILNRCPTRTVQDKTLIEAWS 255
>KZV32174.1 retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dorcoceras hygrometricum]
Length = 699
Score = 226 bits (575), Expect = 4e-67
Identities = 105/166 (63%), Positives = 131/166 (78%)
Frame = -1
Query: 503 SWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AFSIFLQFK 324
SWRA PLELVH+D+CGPMRT +L +YF+LFVDDY+RM W+YFL KS AF F +FK
Sbjct: 342 SWRATEPLELVHADLCGPMRTETLGGSKYFLLFVDDYSRMSWVYFLKFKSEAFGQFFKFK 401
Query: 323 ALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAKRKNRTIV 144
AL EKQ G +KIL+TDRGGEF F Y +++GI ++LT +P+QNGVA+RKNRTIV
Sbjct: 402 ALVEKQKGSNLKILRTDRGGEFTSMEFNQYCEKHGIHKELTAPYTPEQNGVAERKNRTIV 461
Query: 143 EMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
EMARSML+ K LP N WAEA+ T++Y++N SPTKAV NKTP+EAW+
Sbjct: 462 EMARSMLKSKGLPYNFWAEAVTTAVYLINLSPTKAVMNKTPYEAWS 507
>GAU22794.1 hypothetical protein TSUD_142340 [Trifolium subterraneum]
Length = 818
Score = 227 bits (578), Expect = 8e-67
Identities = 104/172 (60%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
Frame = -1
Query: 521 LPFP-KNSWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
L FP +WR K LEL+H+D+CGPMRTPSLNN RYFILF+DD++RM W+YF+ EKS F
Sbjct: 455 LAFPIGETWRTKDVLELIHTDVCGPMRTPSLNNSRYFILFIDDFSRMTWVYFIKEKSEVF 514
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
IF +FKAL EKQSG +K+L++DRG E+ F + ++ GI++QLTV+ SPQQNG+++
Sbjct: 515 GIFKKFKALVEKQSGKNIKMLRSDRGKEYNSHEFDKFCEDEGIEQQLTVAYSPQQNGMSE 574
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAW 9
RKNRT++EMARSM+++K LPN WAEA++T++YILNR PTKAV++KTP E W
Sbjct: 575 RKNRTVMEMARSMMKDKGLPNTFWAEAVYTAVYILNRCPTKAVQDKTPIETW 626
>KYP39385.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 723
Score = 225 bits (573), Expect = 1e-66
Identities = 103/173 (59%), Positives = 140/173 (80%), Gaps = 1/173 (0%)
Frame = -1
Query: 521 LPFPKN-SWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
LPF + +WRAK LEL+H+D+CGPMRTPS N RYFILF+DD+++M W+YFL KS F
Sbjct: 475 LPFSTSKAWRAKNLLELIHTDVCGPMRTPSHTNNRYFILFIDDFSKMTWVYFLKTKSEVF 534
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
IF +FKAL EKQSG Q+K+ ++DRG E+ F + ++ GI++QLTV+ +PQ+NGV++
Sbjct: 535 GIFKKFKALVEKQSGKQIKVFRSDRGKEYTSREFDKFCEDEGIEQQLTVAYTPQKNGVSE 594
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
RKNRT++EMARSML+EK LPN WAEA++T++Y+LNR PTKAV++KTP EAW+
Sbjct: 595 RKNRTVMEMARSMLKEKGLPNTFWAEAVYTAVYLLNRCPTKAVQDKTPIEAWS 647
>KYP33156.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 570
Score = 221 bits (563), Expect = 2e-66
Identities = 103/173 (59%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
Frame = -1
Query: 521 LPFPKN-SWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
LPF +WRAK LEL+H++ICGPMRT SL+N RYFILF+DD++RM W+YF+ KS F
Sbjct: 355 LPFSTGKAWRAKDLLELIHTNICGPMRTSSLHNNRYFILFIDDFSRMTWVYFIKAKSEVF 414
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
IF +FK L EKQSG Q+K+L+++RG E+ F + ++ GI+RQLTV+ SPQ+NGV++
Sbjct: 415 GIFKKFKTLVEKQSGKQIKVLRSNRGKEYTSHEFDKFCEDEGIERQLTVTYSPQKNGVSE 474
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
RKN T++EMARSML+EK LPN WAEA++T++YILNR P K V++KTP EAWN
Sbjct: 475 RKNHTVMEMARSMLKEKGLPNTFWAEAVYTAVYILNRCPNKVVQDKTPIEAWN 527
>GAU35153.1 hypothetical protein TSUD_217860 [Trifolium subterraneum]
Length = 858
Score = 224 bits (570), Expect = 2e-65
Identities = 102/172 (59%), Positives = 138/172 (80%), Gaps = 1/172 (0%)
Frame = -1
Query: 521 LPFP-KNSWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
L FP + +WR K LEL+H+++CGPMRTPSLNN RYFILF+DD++RM W+YF+ EKS F
Sbjct: 512 LAFPTRETWRTKYVLELIHTNVCGPMRTPSLNNNRYFILFIDDFSRMTWVYFIKEKSEVF 571
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
IF +FKAL EKQSG +K+L++DRG E+ F +Y++ GI++Q TV+ SPQQNGV++
Sbjct: 572 GIFKKFKALVEKQSGKHIKMLRSDRGKEYNSHEFDKFYEDEGIEQQQTVAYSPQQNGVSE 631
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAW 9
RKNR ++EMARSM+++K LPN WAEA++ ++YILNR PTKAV++KTP E W
Sbjct: 632 RKNRIVMEMARSMMKDKGLPNTFWAEAVYIAVYILNRYPTKAVQDKTPIETW 683
>CAN79061.1 hypothetical protein VITISV_024577 [Vitis vinifera]
Length = 1424
Score = 223 bits (567), Expect = 3e-64
Identities = 100/171 (58%), Positives = 137/171 (80%), Gaps = 1/171 (0%)
Frame = -1
Query: 515 FPKN-SWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AFSI 339
FPK +WRAK LELVH+DICGPM TPS N +YF+LF+DD+TRM W++F+ +KS FSI
Sbjct: 580 FPKGVAWRAKKVLELVHTDICGPMSTPSQGNNKYFVLFIDDFTRMTWVFFMKQKSEVFSI 639
Query: 338 FLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAKRK 159
F +FK+ EKQSGC +K L++DRG E+ + F N+ ++ G++RQLTV+ +PQQNGV +RK
Sbjct: 640 FKKFKSFVEKQSGCYIKTLRSDRGMEYTSSQFGNFCEDEGVERQLTVAYTPQQNGVVERK 699
Query: 158 NRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
N+T++EMA++ML EK LP WAEA++T++Y+LNR PTKA+ NKTP EAW+
Sbjct: 700 NQTVMEMAKAMLYEKGLPKIFWAEAVNTAVYLLNRCPTKALLNKTPIEAWS 750
>AAG50698.1 copia-type polyprotein, putative [Arabidopsis thaliana] AAG50765.1
copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 221 bits (563), Expect = 1e-63
Identities = 104/173 (60%), Positives = 136/173 (78%), Gaps = 1/173 (0%)
Frame = -1
Query: 521 LPFPK-NSWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
+ FPK +S RA+ PLEL+H+D+CGP++ SL YF+LF+DD++R W+YFL EKS F
Sbjct: 513 MSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVF 572
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
IF +FKA EK+SG +K +++DRGGEF F+ Y ++NGI+RQLTV RSPQQNGVA+
Sbjct: 573 EIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAE 632
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
RKNRTI+EMARSML+ KRLP LWAEA+ ++Y+LNRSPTK+V KTP EAW+
Sbjct: 633 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWS 685
>CAB71063.1 copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 219 bits (559), Expect = 4e-63
Identities = 103/173 (59%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Frame = -1
Query: 521 LPFPK-NSWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
+ FPK +S RA+ PLEL+H+D+CGP++ SL YF+LF+DD++R W+YFL EKS F
Sbjct: 513 MSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVF 572
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
IF +FKA EK+SG +K +++DRGGEF F+ Y ++NGI+RQLTV RSPQQNGV +
Sbjct: 573 EIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVE 632
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
RKNRTI+EMARSML+ KRLP LWAEA+ ++Y+LNRSPTK+V KTP EAW+
Sbjct: 633 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWS 685
>AAD50001.1 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 219 bits (559), Expect = 4e-63
Identities = 103/173 (59%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Frame = -1
Query: 521 LPFPK-NSWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
+ FPK +S RA+ PLEL+H+D+CGP++ SL YF+LF+DD++R W+YFL EKS F
Sbjct: 513 MSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVF 572
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
IF +FKA EK+SG +K +++DRGGEF F+ Y ++NGI+RQLTV RSPQQNGV +
Sbjct: 573 EIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVE 632
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
RKNRTI+EMARSML+ KRLP LWAEA+ ++Y+LNRSPTK+V KTP EAW+
Sbjct: 633 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWS 685
>CAB75469.1 copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 219 bits (557), Expect = 7e-63
Identities = 103/173 (59%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Frame = -1
Query: 521 LPFPK-NSWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
+ FPK +S RA+ PLEL+H+D+CGP++ SL YF+LF+DD++R W+YFL EKS F
Sbjct: 513 MSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVF 572
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
IF +FKA EK+SG +K +++D GGEF F+ Y ++NGI+RQLTV RSPQQNGVA+
Sbjct: 573 EIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAE 632
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
RKNRTI+EMARSML+ KRLP LWAEA+ ++Y+LNRSPTK+V KTP EAW+
Sbjct: 633 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWS 685
>AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 218 bits (555), Expect = 1e-62
Identities = 103/173 (59%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Frame = -1
Query: 521 LPFPK-NSWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
+ FPK +S RA+ LEL+H+D+CGP++ SL YF+LF+DD++R W+YFL EKS F
Sbjct: 513 MSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVF 572
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
IF +FKA EK+SG +K +++DRGGEF F+ Y ++NGI+RQLTV RSPQQNGVA+
Sbjct: 573 EIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAE 632
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
RKNRTI+EMARSML+ KRLP LWAEA+ ++Y+LNRSPTK+V KTP EAW+
Sbjct: 633 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWS 685
>KYP43625.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1262
Score = 216 bits (551), Expect = 4e-62
Identities = 101/172 (58%), Positives = 133/172 (77%), Gaps = 1/172 (0%)
Frame = -1
Query: 521 LPFPKN-SWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
LPFP + +WRA LELVHSD+CGPM+T SLN +YFILF+DD+TRM W+YFL +KS F
Sbjct: 453 LPFPNSVTWRANEKLELVHSDVCGPMKTTSLNGNKYFILFIDDFTRMTWVYFLKQKSEVF 512
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
S+F +FKAL E QSG +K L+TD G E+ T F + + G++ QLTVS SPQQNGVA+
Sbjct: 513 SVFKKFKALVEAQSGFLLKKLRTDNGKEYTSTEFNIFCDDLGVEHQLTVSYSPQQNGVAE 572
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAW 9
RKNR+++EMAR M+ EK+LP + WAEAI+T++Y+ NR PT+A++ TP EAW
Sbjct: 573 RKNRSVLEMARCMIFEKKLPKSFWAEAINTAVYLQNRLPTRAIKGMTPVEAW 624
>KYP41863.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan] KYP41870.1 Retrovirus-related Pol
polyprotein from transposon TNT 1-94 [Cajanus cajan]
Length = 617
Score = 210 bits (535), Expect = 7e-62
Identities = 99/171 (57%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Frame = -1
Query: 521 LPFPKN-SWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
LPF +WRAK LEL+H+DICGPM+ SL+N RYFILF+DD++RM+W+YF+ KS F
Sbjct: 447 LPFSTGKAWRAKDLLELIHTDICGPMQMSSLHNNRYFILFIDDFSRMIWVYFIKAKSEVF 506
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
IF +FK L EKQSG Q+K+L++DRG E+ F + ++ GI++QLTV+ SPQQNGV++
Sbjct: 507 GIFKKFKTLVEKQSGKQIKVLRSDRGKEYTSREFNKFCEDEGIEKQLTVAYSPQQNGVSE 566
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEA 12
RKN T++EMAR ML+EK LPN W EAI+T++YILN+ P K V++KTP EA
Sbjct: 567 RKNCTVMEMARPMLKEKGLPNTFWDEAIYTTVYILNKCPAKVVQDKTPLEA 617
>OMO68768.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1149
Score = 216 bits (549), Expect = 7e-62
Identities = 98/171 (57%), Positives = 136/171 (79%), Gaps = 1/171 (0%)
Frame = -1
Query: 515 FPKN-SWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AFSI 339
FPK +WRAK+ LELVH+D+CGPM TPS + RYFILF+DDYTRM W+YF+ ++S F+I
Sbjct: 397 FPKGVAWRAKSMLELVHTDVCGPMTTPSHSGNRYFILFIDDYTRMTWVYFMRQRSEVFTI 456
Query: 338 FLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAKRK 159
F +FK+L EKQSG +K+L++D G E+ F + ++ ++RQLTV SPQQNGV++RK
Sbjct: 457 FKKFKSLVEKQSGHYIKVLRSDNGKEYTSREFEMFCEDEVVERQLTVGYSPQQNGVSERK 516
Query: 158 NRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
N+T++EMA+SML EK LP + WAEA++T++Y++NR PTKAV N+ PFEAW+
Sbjct: 517 NQTVMEMAKSMLFEKNLPKSFWAEAVNTAVYLINRCPTKAVWNQAPFEAWS 567
>KYP57480.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 216
Score = 199 bits (505), Expect = 1e-61
Identities = 94/172 (54%), Positives = 123/172 (71%), Gaps = 1/172 (0%)
Frame = -1
Query: 518 PFPKNS-WRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AFS 342
P PK S WRA L+L+H+DICGP+ S N KRYF+ F+DDY+R W+YFL EKS A
Sbjct: 41 PMPKKSKWRASQKLQLIHADICGPITPASNNQKRYFLCFIDDYSRKSWVYFLLEKSEALY 100
Query: 341 IFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAKR 162
F FK L EK+SG +K+ +TDRGGEF + F + + NGI+R+LT + +PQQNGVA+R
Sbjct: 101 HFKCFKTLVEKESGLPVKVFRTDRGGEFTSSEFNEFCELNGIKRKLTTAYTPQQNGVAER 160
Query: 161 KNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
KNRTI+ + RSML EK +P W EA+ ++Y+LNRSPT AV+ TP EAW+
Sbjct: 161 KNRTIMNLVRSMLSEKNIPKTFWPEAVKWTVYVLNRSPTLAVKGMTPEEAWS 212
>XP_013688817.1 PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
napus]
Length = 2682
Score = 215 bits (547), Expect = 1e-61
Identities = 100/173 (57%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Frame = -1
Query: 521 LPFPKNS-WRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
+ FPK S RA+ PLEL+H+D+CGP++ SL YF+LF+DD++R W+YFL +KS F
Sbjct: 521 MSFPKESETRARKPLELIHTDVCGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEVF 580
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
F +FKA EK+SG ++K +++DRGGEF+ F+ Y ++NGI+RQLTV R+PQQNGVA+
Sbjct: 581 ENFKKFKAHVEKESGLKIKSMRSDRGGEFMSKEFLKYCEDNGIRRQLTVPRTPQQNGVAE 640
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
RKNRTI+EMARSML+ K+LP LWAEA+ ++YI NRSPTK+V KTP EAW+
Sbjct: 641 RKNRTILEMARSMLKSKKLPKELWAEAVACAVYISNRSPTKSVLEKTPQEAWS 693
Score = 215 bits (547), Expect = 1e-61
Identities = 100/173 (57%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Frame = -1
Query: 521 LPFPKNS-WRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AF 345
+ FPK S RA+ PLEL+H+D+CGP++ SL YF+LF+DD++R W+YFL +KS F
Sbjct: 1860 MSFPKESETRARKPLELIHTDVCGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEVF 1919
Query: 344 SIFLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAK 165
F +FKA EK+SG ++K +++DRGGEF+ F+ Y ++NGI+RQLTV R+PQQNGVA+
Sbjct: 1920 ENFKKFKAHVEKESGLKIKSMRSDRGGEFMSKEFLKYCEDNGIRRQLTVPRTPQQNGVAE 1979
Query: 164 RKNRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
RKNRTI+EMARSML+ K+LP LWAEA+ ++YI NRSPTK+V KTP EAW+
Sbjct: 1980 RKNRTILEMARSMLKSKKLPKELWAEAVACAVYISNRSPTKSVLEKTPQEAWS 2032
>XP_009356290.1 PREDICTED: uncharacterized protein LOC103947158 [Pyrus x
bretschneideri]
Length = 798
Score = 212 bits (539), Expect = 2e-61
Identities = 92/166 (55%), Positives = 132/166 (79%)
Frame = -1
Query: 503 SWRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AFSIFLQFK 324
+WRA PL+L+H+D+CGPM+TP+L+ RYF+LF+DD TRM+W+YF+ KS F+IF +FK
Sbjct: 527 AWRASQPLDLIHTDVCGPMKTPTLSGNRYFLLFIDDCTRMVWVYFMRNKSEVFTIFKKFK 586
Query: 323 ALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAKRKNRTIV 144
+ E QSG ++K L++DRGGEF F + + G+Q+QLTV+ +PQQNGVA+RKNRT+V
Sbjct: 587 VMVELQSGLKIKRLRSDRGGEFTSIEFQEFCEWAGLQKQLTVAYTPQQNGVAERKNRTVV 646
Query: 143 EMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
EM +SML +K++P + W EA++ S+Y+LNR PTKA+ KTPFEA++
Sbjct: 647 EMTKSMLHDKKMPLSFWGEAVNASVYLLNRCPTKALEKKTPFEAFS 692
>JAU74580.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 409
Score = 203 bits (517), Expect = 4e-61
Identities = 93/171 (54%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Frame = -1
Query: 515 FPKNS-WRAKAPLELVHSDICGPMRTPSLNNKRYFILFVDDYTRMMWLYFLNEKS*AFSI 339
FPK S RAK LEL+HSD+CGPM++ S+ RYF+ F+DD TRM+W+YFL KS F
Sbjct: 124 FPKESETRAKEKLELIHSDVCGPMQSLSIIGSRYFLTFIDDATRMVWVYFLKAKSEVFQT 183
Query: 338 FLQFKALAEKQSGCQMKILQTDRGGEFIYTPFMNYYKENGIQRQLTVSRSPQQNGVAKRK 159
F +FK L E Q+ C++K ++TDRG E++ F + +++GI+RQLT + SPQQNGV++R+
Sbjct: 184 FKKFKNLVENQASCKIKKIRTDRGSEYLSGEFTKFLEDHGIERQLTATYSPQQNGVSERR 243
Query: 158 NRTIVEMARSMLQEKRLPNNLWAEAIHTSIYILNRSPTKAVRNKTPFEAWN 6
NR++VEMAR+M++ K LP WAEA+HT+ Y+ NR PT+A+ NKTP EAWN
Sbjct: 244 NRSLVEMARAMIKAKDLPLKFWAEAVHTAAYLQNRIPTRALENKTPLEAWN 294