BLASTX nr result

ID: Panax25_contig00038128 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00038128
         (654 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017218330.1 PREDICTED: nuclear pore complex protein NUP214 [D...   103   5e-22
KZM86957.1 hypothetical protein DCAR_024091 [Daucus carota subsp...   103   5e-22
XP_019155602.1 PREDICTED: nuclear pore complex protein NUP214 is...    69   6e-10
XP_019155601.1 PREDICTED: nuclear pore complex protein NUP214 is...    69   6e-10
XP_019155600.1 PREDICTED: nuclear pore complex protein NUP214 is...    69   6e-10
XP_019155599.1 PREDICTED: nuclear pore complex protein NUP214 is...    69   6e-10
CBI16571.3 unnamed protein product, partial [Vitis vinifera]           61   3e-07
XP_010651410.1 PREDICTED: nuclear pore complex protein NUP214 [V...    61   3e-07
OAY29006.1 hypothetical protein MANES_15G110800 [Manihot esculen...    57   9e-06

>XP_017218330.1 PREDICTED: nuclear pore complex protein NUP214 [Daucus carota
           subsp. sativus]
          Length = 1708

 Score =  103 bits (258), Expect = 5e-22
 Identities = 61/147 (41%), Positives = 89/147 (60%)
 Frame = -1

Query: 456 TSQEEASLILPAQYGPSEVLSKVEEQSIEQVGFGLQSREAKDPAAVHKSLTAYIPQITSH 277
           +  E+  L +  +  P +VLS++EEQ          + EAK+ A V+K + AYIPQITS+
Sbjct: 435 SEDEDVPLSIATEVQPFDVLSRIEEQK-------RGAEEAKESAIVYKPVHAYIPQITSN 487

Query: 276 NENSTGKQEVKHVLNSQSFDTKEQQIPVVKLDQDEKGQQPTFSGQQGENLKQSMLKTSHF 97
           ++ ++GK+ VK VL+SQ+ +T+ Q  PVV L+ D KGQ      +QGE L+ S L  S+ 
Sbjct: 488 DDYTSGKEMVKQVLDSQTINTQAQMTPVVNLNYDGKGQLSDLPEKQGEILRPSALMISNT 547

Query: 96  EGPRPAVKDLRKTETQKNAEVRSNANT 16
           +    AVKDL+  E Q  AEV SN +T
Sbjct: 548 DSSGDAVKDLKNNEPQTIAEVISNNDT 574



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 35/73 (47%), Positives = 46/73 (63%)
 Frame = -1

Query: 654 AYIPQITSQNENSTGKQEVKHVLNSQTFDTKEQQKIPVVMLNQDEKGQQQTFSGQQGENL 475
           AYIPQITS ++ ++GK+ VK VL+SQT +T + Q  PVV LN D KGQ      +QGE L
Sbjct: 479 AYIPQITSNDDYTSGKEMVKQVLDSQTINT-QAQMTPVVNLNYDGKGQLSDLPEKQGEIL 537

Query: 474 NQSMFKTSQEEAS 436
             S    S  ++S
Sbjct: 538 RPSALMISNTDSS 550


>KZM86957.1 hypothetical protein DCAR_024091 [Daucus carota subsp. sativus]
          Length = 1772

 Score =  103 bits (258), Expect = 5e-22
 Identities = 61/147 (41%), Positives = 89/147 (60%)
 Frame = -1

Query: 456 TSQEEASLILPAQYGPSEVLSKVEEQSIEQVGFGLQSREAKDPAAVHKSLTAYIPQITSH 277
           +  E+  L +  +  P +VLS++EEQ          + EAK+ A V+K + AYIPQITS+
Sbjct: 478 SEDEDVPLSIATEVQPFDVLSRIEEQK-------RGAEEAKESAIVYKPVHAYIPQITSN 530

Query: 276 NENSTGKQEVKHVLNSQSFDTKEQQIPVVKLDQDEKGQQPTFSGQQGENLKQSMLKTSHF 97
           ++ ++GK+ VK VL+SQ+ +T+ Q  PVV L+ D KGQ      +QGE L+ S L  S+ 
Sbjct: 531 DDYTSGKEMVKQVLDSQTINTQAQMTPVVNLNYDGKGQLSDLPEKQGEILRPSALMISNT 590

Query: 96  EGPRPAVKDLRKTETQKNAEVRSNANT 16
           +    AVKDL+  E Q  AEV SN +T
Sbjct: 591 DSSGDAVKDLKNNEPQTIAEVISNNDT 617



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 35/73 (47%), Positives = 46/73 (63%)
 Frame = -1

Query: 654 AYIPQITSQNENSTGKQEVKHVLNSQTFDTKEQQKIPVVMLNQDEKGQQQTFSGQQGENL 475
           AYIPQITS ++ ++GK+ VK VL+SQT +T + Q  PVV LN D KGQ      +QGE L
Sbjct: 522 AYIPQITSNDDYTSGKEMVKQVLDSQTINT-QAQMTPVVNLNYDGKGQLSDLPEKQGEIL 580

Query: 474 NQSMFKTSQEEAS 436
             S    S  ++S
Sbjct: 581 RPSALMISNTDSS 593


>XP_019155602.1 PREDICTED: nuclear pore complex protein NUP214 isoform X4 [Ipomoea
            nil]
          Length = 1818

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 60/211 (28%), Positives = 86/211 (40%)
 Frame = -1

Query: 645  PQITSQNENSTGKQEVKHVLNSQTFDTKEQQKIPVVMLNQDEKGQQQTFSGQQGENLNQS 466
            P + SQ +  T  Q  K +LN     ++ Q K+PV+  +QD  G Q    G+Q ENL  S
Sbjct: 497  PSVLSQEDIRTSNQGPKLLLN---LGSEYQHKLPVMKPSQDRDGLQSPMFGKQDENLKHS 553

Query: 465  MFKTSQEEASLILPAQYGPSEVLSKVEEQSIEQVGFGLQSREAKDPAAVHKSLTAYIPQI 286
                SQ      L        V S VE ++   +G                S +   P +
Sbjct: 554  SVNASQPANPETLGNSLRMKAVHSAVEAKT--SIG----------------SASGTPPSV 595

Query: 285  TSHNENSTGKQEVKHVLNSQSFDTKEQQIPVVKLDQDEKGQQPTFSGQQGENLKQSMLKT 106
             S +   T  Q  K +LN  S D  + ++PV+KL QD  G Q    G Q ENLK S +  
Sbjct: 596  LSQDAIRTSNQGPKPLLNLGSED--QHKLPVMKLSQDRVGLQSPMFGIQDENLKHSSVNA 653

Query: 105  SHFEGPRPAVKDLRKTETQKNAEVRSNANTN 13
            S    P      LR        E +++  ++
Sbjct: 654  SQPANPETLGNSLRMKAVHTTVEAKTSIGSD 684


>XP_019155601.1 PREDICTED: nuclear pore complex protein NUP214 isoform X3 [Ipomoea
            nil]
          Length = 1860

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 60/211 (28%), Positives = 86/211 (40%)
 Frame = -1

Query: 645  PQITSQNENSTGKQEVKHVLNSQTFDTKEQQKIPVVMLNQDEKGQQQTFSGQQGENLNQS 466
            P + SQ +  T  Q  K +LN     ++ Q K+PV+  +QD  G Q    G+Q ENL  S
Sbjct: 497  PSVLSQEDIRTSNQGPKLLLN---LGSEYQHKLPVMKPSQDRDGLQSPMFGKQDENLKHS 553

Query: 465  MFKTSQEEASLILPAQYGPSEVLSKVEEQSIEQVGFGLQSREAKDPAAVHKSLTAYIPQI 286
                SQ      L        V S VE ++   +G                S +   P +
Sbjct: 554  SVNASQPANPETLGNSLRMKAVHSAVEAKT--SIG----------------SASGTPPSV 595

Query: 285  TSHNENSTGKQEVKHVLNSQSFDTKEQQIPVVKLDQDEKGQQPTFSGQQGENLKQSMLKT 106
             S +   T  Q  K +LN  S D  + ++PV+KL QD  G Q    G Q ENLK S +  
Sbjct: 596  LSQDAIRTSNQGPKPLLNLGSED--QHKLPVMKLSQDRVGLQSPMFGIQDENLKHSSVNA 653

Query: 105  SHFEGPRPAVKDLRKTETQKNAEVRSNANTN 13
            S    P      LR        E +++  ++
Sbjct: 654  SQPANPETLGNSLRMKAVHTTVEAKTSIGSD 684


>XP_019155600.1 PREDICTED: nuclear pore complex protein NUP214 isoform X2 [Ipomoea
            nil]
          Length = 1861

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 60/211 (28%), Positives = 86/211 (40%)
 Frame = -1

Query: 645  PQITSQNENSTGKQEVKHVLNSQTFDTKEQQKIPVVMLNQDEKGQQQTFSGQQGENLNQS 466
            P + SQ +  T  Q  K +LN     ++ Q K+PV+  +QD  G Q    G+Q ENL  S
Sbjct: 497  PSVLSQEDIRTSNQGPKLLLN---LGSEYQHKLPVMKPSQDRDGLQSPMFGKQDENLKHS 553

Query: 465  MFKTSQEEASLILPAQYGPSEVLSKVEEQSIEQVGFGLQSREAKDPAAVHKSLTAYIPQI 286
                SQ      L        V S VE ++   +G                S +   P +
Sbjct: 554  SVNASQPANPETLGNSLRMKAVHSAVEAKT--SIG----------------SASGTPPSV 595

Query: 285  TSHNENSTGKQEVKHVLNSQSFDTKEQQIPVVKLDQDEKGQQPTFSGQQGENLKQSMLKT 106
             S +   T  Q  K +LN  S D  + ++PV+KL QD  G Q    G Q ENLK S +  
Sbjct: 596  LSQDAIRTSNQGPKPLLNLGSED--QHKLPVMKLSQDRVGLQSPMFGIQDENLKHSSVNA 653

Query: 105  SHFEGPRPAVKDLRKTETQKNAEVRSNANTN 13
            S    P      LR        E +++  ++
Sbjct: 654  SQPANPETLGNSLRMKAVHTTVEAKTSIGSD 684


>XP_019155599.1 PREDICTED: nuclear pore complex protein NUP214 isoform X1 [Ipomoea
            nil]
          Length = 1871

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 60/211 (28%), Positives = 86/211 (40%)
 Frame = -1

Query: 645  PQITSQNENSTGKQEVKHVLNSQTFDTKEQQKIPVVMLNQDEKGQQQTFSGQQGENLNQS 466
            P + SQ +  T  Q  K +LN     ++ Q K+PV+  +QD  G Q    G+Q ENL  S
Sbjct: 497  PSVLSQEDIRTSNQGPKLLLN---LGSEYQHKLPVMKPSQDRDGLQSPMFGKQDENLKHS 553

Query: 465  MFKTSQEEASLILPAQYGPSEVLSKVEEQSIEQVGFGLQSREAKDPAAVHKSLTAYIPQI 286
                SQ      L        V S VE ++   +G                S +   P +
Sbjct: 554  SVNASQPANPETLGNSLRMKAVHSAVEAKT--SIG----------------SASGTPPSV 595

Query: 285  TSHNENSTGKQEVKHVLNSQSFDTKEQQIPVVKLDQDEKGQQPTFSGQQGENLKQSMLKT 106
             S +   T  Q  K +LN  S D  + ++PV+KL QD  G Q    G Q ENLK S +  
Sbjct: 596  LSQDAIRTSNQGPKPLLNLGSED--QHKLPVMKLSQDRVGLQSPMFGIQDENLKHSSVNA 653

Query: 105  SHFEGPRPAVKDLRKTETQKNAEVRSNANTN 13
            S    P      LR        E +++  ++
Sbjct: 654  SQPANPETLGNSLRMKAVHTTVEAKTSIGSD 684


>CBI16571.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1685

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 1/168 (0%)
 Frame = -1

Query: 513 QQQTFSGQQGENLNQSMFKTSQEEASLILPAQYGPSEVLSKVEEQSIEQVGFGLQSREAK 334
           Q  + +G      + S     ++E     P ++  S   +  +E SI+Q G  L   +  
Sbjct: 423 QVASVTGTPAPTQDLSPLTGDEDETPAEAPVEHDQSRE-ANTKEISIKQEGEILIKNDLN 481

Query: 333 DPAAVHKSLTAYIPQITSHNENSTGKQEVKHVLNSQSFDTKEQQ-IPVVKLDQDEKGQQP 157
                   ++A I     H E      E K ++NSQ+F+   QQ +  +KL Q+  G+Q 
Sbjct: 482 TFQENKSLISACIADQILHKETIAADHEAKSLVNSQTFEADGQQRVSTIKLYQEVDGKQS 541

Query: 156 TFSGQQGENLKQSMLKTSHFEGPRPAVKDLRKTETQKNAEVRSNANTN 13
               QQ  NL+ S LKTS  EG    V D++KT+ QK   V S   ++
Sbjct: 542 GLPRQQSTNLEGSSLKTSPLEGLGNVVGDVKKTDIQKITGVGSGLGSS 589


>XP_010651410.1 PREDICTED: nuclear pore complex protein NUP214 [Vitis vinifera]
          Length = 1756

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 1/168 (0%)
 Frame = -1

Query: 513 QQQTFSGQQGENLNQSMFKTSQEEASLILPAQYGPSEVLSKVEEQSIEQVGFGLQSREAK 334
           Q  + +G      + S     ++E     P ++  S   +  +E SI+Q G  L   +  
Sbjct: 423 QVASVTGTPAPTQDLSPLTGDEDETPAEAPVEHDQSRE-ANTKEISIKQEGEILIKNDLN 481

Query: 333 DPAAVHKSLTAYIPQITSHNENSTGKQEVKHVLNSQSFDTKEQQ-IPVVKLDQDEKGQQP 157
                   ++A I     H E      E K ++NSQ+F+   QQ +  +KL Q+  G+Q 
Sbjct: 482 TFQENKSLISACIADQILHKETIAADHEAKSLVNSQTFEADGQQRVSTIKLYQEVDGKQS 541

Query: 156 TFSGQQGENLKQSMLKTSHFEGPRPAVKDLRKTETQKNAEVRSNANTN 13
               QQ  NL+ S LKTS  EG    V D++KT+ QK   V S   ++
Sbjct: 542 GLPRQQSTNLEGSSLKTSPLEGLGNVVGDVKKTDIQKITGVGSGLGSS 589


>OAY29006.1 hypothetical protein MANES_15G110800 [Manihot esculenta] OAY29007.1
           hypothetical protein MANES_15G110800 [Manihot esculenta]
           OAY29008.1 hypothetical protein MANES_15G110800 [Manihot
           esculenta] OAY29009.1 hypothetical protein
           MANES_15G110800 [Manihot esculenta]
          Length = 1843

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
 Frame = -1

Query: 462 FKTSQEEASLI-LPAQYGPSEVLSKVEEQSIEQVGFGLQSR-EAKDPAAVHK-------- 313
           F    EE SL  +PA+   SE+ S + +Q+ EQV  GLQ + E+K  + + K        
Sbjct: 439 FALYDEEDSLSDIPAECAQSELPSGLGKQTSEQVDVGLQLKNESKWESNIGKVSEIPRTT 498

Query: 312 ----------SLTAYIPQITSHNENSTGKQEVKHVLNSQ-SFDTKEQQIPVVKLDQDEKG 166
                     S+     + TS+       ++V+ ++N + S    ++   V KL    +G
Sbjct: 499 GLMPSGKGGSSMALLATEQTSYKGTIPKGRQVESLVNFEFSVADGQENASVTKLHHSVEG 558

Query: 165 QQPTFSGQQGENLKQSMLKTSHFEGPRPAVKDLRKTETQKNAEVRSNANTNL 10
           QQ   SGQQ   + QS LK S  +GP    K   K E+QK  E RS++   L
Sbjct: 559 QQAQISGQQSAKVGQSSLKNSPLDGPSYFDKHSSKAESQKFVEFRSDSTALL 610


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