BLASTX nr result

ID: Panax25_contig00038059 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00038059
         (1377 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002532351.1 PREDICTED: gibberellin 20 oxidase 1 [Ricinus comm...    57   1e-09
KZN07502.1 hypothetical protein DCAR_008339 [Daucus carota subsp...    61   3e-07
XP_017233765.1 PREDICTED: gibberellin 20 oxidase 1-like [Daucus ...    61   8e-07

>XP_002532351.1 PREDICTED: gibberellin 20 oxidase 1 [Ricinus communis] EEF30024.1
           Gibberellin 20 oxidase, putative [Ricinus communis]
          Length = 361

 Score = 57.0 bits (136), Expect(2) = 1e-09
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = -2

Query: 236 IKSIRRHLHEFF*SSTEQKLKVSRSANLPLGNCATKPDYGDKLPW 102
           I+  + H++EFF  S EQK+K +RS NLPLG  A+ PDYG  LPW
Sbjct: 93  IEKFKVHVNEFFALSMEQKMKAARSTNLPLGYSASNPDYGKNLPW 137



 Score = 35.4 bits (80), Expect(2) = 1e-09
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = -1

Query: 102 AEIIQVHQSP*QPVGFHRKVLGDQYQPY 19
           AEIIQ+ QS  Q V F RKV  DQYQP+
Sbjct: 138 AEIIQLLQSQEQVVSFARKVYDDQYQPF 165


>KZN07502.1 hypothetical protein DCAR_008339 [Daucus carota subsp. sativus]
          Length = 207

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = -2

Query: 233 KSIRRHLHEFF*SSTEQKLKVSRSANLPLGNCATKPDYGDKLPWQRSYRYINPP 72
           ++ +R LHEFF    EQKLK +RSA+LPLG  AT PDYG+ LPW    + +  P
Sbjct: 93  ENFKRRLHEFFDLPMEQKLKGARSASLPLGYSATNPDYGENLPWAEIIQLLQSP 146


>XP_017233765.1 PREDICTED: gibberellin 20 oxidase 1-like [Daucus carota subsp.
           sativus]
          Length = 283

 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = -2

Query: 233 KSIRRHLHEFF*SSTEQKLKVSRSANLPLGNCATKPDYGDKLPWQRSYRYINPP 72
           ++ +R LHEFF    EQKLK +RSA+LPLG  AT PDYG+ LPW    + +  P
Sbjct: 93  ENFKRRLHEFFDLPMEQKLKGARSASLPLGYSATNPDYGENLPWAEIIQLLQSP 146


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