BLASTX nr result
ID: Panax25_contig00036930
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00036930
(529 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CBI23183.3 unnamed protein product, partial [Vitis vinifera] 147 8e-38
XP_019078215.1 PREDICTED: polyadenylation and cleavage factor ho... 147 8e-38
XP_010655357.1 PREDICTED: polyadenylation and cleavage factor ho... 147 9e-38
ONI10047.1 hypothetical protein PRUPE_4G024700 [Prunus persica] 142 3e-36
XP_007213705.1 hypothetical protein PRUPE_ppa000684mg [Prunus pe... 142 3e-36
XP_017236137.1 PREDICTED: polyadenylation and cleavage factor ho... 139 8e-35
XP_008224793.1 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a... 139 8e-35
XP_015885084.1 PREDICTED: polyadenylation and cleavage factor ho... 137 3e-34
XP_011037707.1 PREDICTED: polyadenylation and cleavage factor ho... 124 7e-30
XP_011037706.1 PREDICTED: polyadenylation and cleavage factor ho... 124 7e-30
XP_011037705.1 PREDICTED: polyadenylation and cleavage factor ho... 124 7e-30
XP_011037702.1 PREDICTED: polyadenylation and cleavage factor ho... 124 7e-30
CDO99723.1 unnamed protein product [Coffea canephora] 124 1e-29
GAV85191.1 CTD_bind domain-containing protein [Cephalotus follic... 120 3e-28
XP_011000684.1 PREDICTED: polyadenylation and cleavage factor ho... 118 1e-27
XP_012091393.1 PREDICTED: polyadenylation and cleavage factor ho... 115 2e-26
XP_010101465.1 hypothetical protein L484_012890 [Morus notabilis... 114 2e-26
XP_017236138.1 PREDICTED: polyadenylation and cleavage factor ho... 112 2e-25
XP_008384033.1 PREDICTED: polyadenylation and cleavage factor ho... 111 3e-25
XP_008358743.1 PREDICTED: polyadenylation and cleavage factor ho... 111 4e-25
>CBI23183.3 unnamed protein product, partial [Vitis vinifera]
Length = 1003
Score = 147 bits (371), Expect = 8e-38
Identities = 84/175 (48%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
DNKV + WQNTEEEE+DWEDM+PTLA+ +L SS GSF TRPG PL
Sbjct: 473 DNKVPKKAWQNTEEEEYDWEDMNPTLANRRQCNNILQSSVSPFGSFRTRPGSGALGAAPL 532
Query: 349 ENDFRRSSWAGWAQLSASNGSS-IGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
E+DF RS W+G AQLS + S I ED VP+ GRG I+K E+ F GSH P E
Sbjct: 533 ESDFNRSKWSGQAQLSMVDDSPVIAEDVVPTTSLGRGSISK--PGFGNETKFHGSHYPQE 590
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPFFASG-----GEQKPPIINDFPGVGVQ 23
SWN +PQ SQ N N+K G+NF PF SG E P+I++ P Q
Sbjct: 591 SWNLVHRVPQSSQHNRNAKGRGKNFNTPFLGSGISSSAAETISPLISNIPDADAQ 645
>XP_019078215.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Vitis vinifera]
Length = 1033
Score = 147 bits (371), Expect = 8e-38
Identities = 84/175 (48%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
DNKV + WQNTEEEE+DWEDM+PTLA+ +L SS GSF TRPG PL
Sbjct: 433 DNKVPKKAWQNTEEEEYDWEDMNPTLANRRQCNNILQSSVSPFGSFRTRPGSGALGAAPL 492
Query: 349 ENDFRRSSWAGWAQLSASNGSS-IGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
E+DF RS W+G AQLS + S I ED VP+ GRG I+K E+ F GSH P E
Sbjct: 493 ESDFNRSKWSGQAQLSMVDDSPVIAEDVVPTTSLGRGSISK--PGFGNETKFHGSHYPQE 550
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPFFASG-----GEQKPPIINDFPGVGVQ 23
SWN +PQ SQ N N+K G+NF PF SG E P+I++ P Q
Sbjct: 551 SWNLVHRVPQSSQHNRNAKGRGKNFNTPFLGSGISSSAAETISPLISNIPDADAQ 605
>XP_010655357.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Vitis vinifera]
Length = 1046
Score = 147 bits (371), Expect = 9e-38
Identities = 84/175 (48%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
DNKV + WQNTEEEE+DWEDM+PTLA+ +L SS GSF TRPG PL
Sbjct: 433 DNKVPKKAWQNTEEEEYDWEDMNPTLANRRQCNNILQSSVSPFGSFRTRPGSGALGAAPL 492
Query: 349 ENDFRRSSWAGWAQLSASNGSS-IGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
E+DF RS W+G AQLS + S I ED VP+ GRG I+K E+ F GSH P E
Sbjct: 493 ESDFNRSKWSGQAQLSMVDDSPVIAEDVVPTTSLGRGSISK--PGFGNETKFHGSHYPQE 550
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPFFASG-----GEQKPPIINDFPGVGVQ 23
SWN +PQ SQ N N+K G+NF PF SG E P+I++ P Q
Sbjct: 551 SWNLVHRVPQSSQHNRNAKGRGKNFNTPFLGSGISSSAAETISPLISNIPDADAQ 605
>ONI10047.1 hypothetical protein PRUPE_4G024700 [Prunus persica]
Length = 1017
Score = 142 bits (359), Expect = 3e-36
Identities = 79/171 (46%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
D+K +WQNTEEEEFDWEDMSPTLA + + LPS+ S S+ RP T N PL
Sbjct: 400 DHKATQMSWQNTEEEEFDWEDMSPTLAEQNRSNDYLPSTAPPSRSYRARPSLGTLNASPL 459
Query: 349 ENDFRRSSWAGWAQL-SASNGSSIGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
E+D RS+W+ A L SA S I EDPVP +G RG + + + ++E +H GS P E
Sbjct: 460 ESD-SRSTWSTQAHLPSAEQSSVITEDPVPPLGFSRGSTSTVSRFQSETNHSLGSRYPQE 518
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPFFA----SGGEQKPPIINDFPGV 32
+WN P +L Q SQ N++ GRNFQ+PF A SGGE+ ++ P V
Sbjct: 519 AWNIPFHLSQSSQNPLNARGRGRNFQMPFVASGVSSGGEKMSAFVDKLPDV 569
>XP_007213705.1 hypothetical protein PRUPE_ppa000684mg [Prunus persica]
Length = 1037
Score = 142 bits (359), Expect = 3e-36
Identities = 79/171 (46%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
D+K +WQNTEEEEFDWEDMSPTLA + + LPS+ S S+ RP T N PL
Sbjct: 420 DHKATQMSWQNTEEEEFDWEDMSPTLAEQNRSNDYLPSTAPPSRSYRARPSLGTLNASPL 479
Query: 349 ENDFRRSSWAGWAQL-SASNGSSIGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
E+D RS+W+ A L SA S I EDPVP +G RG + + + ++E +H GS P E
Sbjct: 480 ESD-SRSTWSTQAHLPSAEQSSVITEDPVPPLGFSRGSTSTVSRFQSETNHSLGSRYPQE 538
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPFFA----SGGEQKPPIINDFPGV 32
+WN P +L Q SQ N++ GRNFQ+PF A SGGE+ ++ P V
Sbjct: 539 AWNIPFHLSQSSQNPLNARGRGRNFQMPFVASGVSSGGEKMSAFVDKLPDV 589
>XP_017236137.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Daucus carota subsp. sativus] KZN07292.1 hypothetical
protein DCAR_008129 [Daucus carota subsp. sativus]
Length = 986
Score = 139 bits (349), Expect = 8e-35
Identities = 79/176 (44%), Positives = 100/176 (56%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
+NK+ V+TW++ EEEEF WEDMSPTLA+G+L + L S SG TT PG E + +
Sbjct: 415 NNKMAVQTWKDNEEEEFKWEDMSPTLATGNLKSSLFSQSNPMSGILTTVPGVEPQHPVLM 474
Query: 349 ENDFRRSSWAGWAQLSASNGSSIGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLES 170
EN FRR +G Q+SA + SS D V GL N I+ +RNE S FP S NP E
Sbjct: 475 ENSFRRGHQSGREQMSAFSDSSQITDSV------HGLTNNIYGVRNEGSQFPTSRNPPEV 528
Query: 169 WNFPQNLPQLSQKNYNSKQGGRNFQLPFFASGGEQKPPIINDFPGVGVQRGSSTFA 2
WN P + RN Q+PF +S GE K P +N FPG+ +RGS FA
Sbjct: 529 WNIPPS-------------SQRNLQVPFISSAGELKIPPVNGFPGLDKERGSLDFA 571
>XP_008224793.1 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4 [Prunus mume]
Length = 1002
Score = 139 bits (349), Expect = 8e-35
Identities = 78/171 (45%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
D+K +WQNTEEEEFDWEDMSPTLA N Y+ PS+ S S+ RP T N+ PL
Sbjct: 400 DHKATQMSWQNTEEEEFDWEDMSPTLADQRSNDYM-PSTAPPSRSYRARPSLGTLNVSPL 458
Query: 349 ENDFRRSSWAGWAQLSASNGSS-IGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
E+D RS+W+ A L + SS I EDP P +G RG + + + ++E +H GS P E
Sbjct: 459 ESD-SRSTWSTQAHLPLAEQSSVITEDPAPLLGFSRGSTSTVSRFQSETNHSLGSRYPQE 517
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPFFA----SGGEQKPPIINDFPGV 32
+WN P +L Q SQ N++ GRNFQ+PF A SGGE+ ++ P V
Sbjct: 518 AWNIPFHLSQSSQNLLNARGRGRNFQMPFVASGVSSGGEKMSAFVDKLPDV 568
>XP_015885084.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Ziziphus
jujuba]
Length = 932
Score = 137 bits (345), Expect = 3e-34
Identities = 80/169 (47%), Positives = 97/169 (57%), Gaps = 5/169 (2%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
D KV +WQNTEEEEFDWEDMSPTL + +PSS F RPGF T PL
Sbjct: 339 DQKVIPMSWQNTEEEEFDWEDMSPTLTDRGRSNDFMPSSIPPFRGFKARPGFGTSRATPL 398
Query: 349 ENDFRRSSWAGWAQLSASNGSSIGED-PVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
E D R+SW+ AQL A++ SSI D V SI G G +KI + +E +H S P E
Sbjct: 399 EPDI-RNSWSSQAQLPAADDSSIAADGAVHSIAFGHGSTSKISRFPSEINHNAVSRYPRE 457
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPF----FASGGEQKPPIINDFP 38
WN P +LPQ SQ NSK GRNF++P +SG E+ PP I+ P
Sbjct: 458 PWNMPHHLPQSSQNLLNSKGRGRNFRMPSLPGGISSGAEKIPPFIDKLP 506
>XP_011037707.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X6 [Populus euphratica]
Length = 886
Score = 124 bits (312), Expect = 7e-30
Identities = 78/179 (43%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Frame = -1
Query: 526 NKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPLE 347
NKV R+WQNTEEEEFDWEDMSPTL+ LPSS GS RP F + E
Sbjct: 268 NKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDFLPSSIPPFGSVVPRPAFGRLSAIHAE 327
Query: 346 NDFR--RSSWAGWAQLSASNGSSIGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
+D R RSS A A + S S+I E+ V +GSGRG +KI R E + GS + E
Sbjct: 328 SDIRSNRSSLAPMASVDGS--SNIAEEAVSILGSGRGSTSKIPGFRTERNQILGSRHHQE 385
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPFFAS-----GGEQKPPIINDFPGVGVQRGSS 11
+WNFP ++ Q S NSK GR+FQ+P S GGE P+ P + Q S
Sbjct: 386 AWNFPPHIHQ-SAHLLNSKGRGRDFQMPLSGSGVSSLGGENYSPLAEKLPDIDAQLNRS 443
>XP_011037706.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X5 [Populus euphratica]
Length = 1035
Score = 124 bits (312), Expect = 7e-30
Identities = 78/179 (43%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Frame = -1
Query: 526 NKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPLE 347
NKV R+WQNTEEEEFDWEDMSPTL+ LPSS GS RP F + E
Sbjct: 417 NKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDFLPSSIPPFGSVVPRPAFGRLSAIHAE 476
Query: 346 NDFR--RSSWAGWAQLSASNGSSIGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
+D R RSS A A + S S+I E+ V +GSGRG +KI R E + GS + E
Sbjct: 477 SDIRSNRSSLAPMASVDGS--SNIAEEAVSILGSGRGSTSKIPGFRTERNQILGSRHHQE 534
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPFFAS-----GGEQKPPIINDFPGVGVQRGSS 11
+WNFP ++ Q S NSK GR+FQ+P S GGE P+ P + Q S
Sbjct: 535 AWNFPPHIHQ-SAHLLNSKGRGRDFQMPLSGSGVSSLGGENYSPLAEKLPDIDAQLNRS 592
>XP_011037705.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X4 [Populus euphratica]
Length = 1051
Score = 124 bits (312), Expect = 7e-30
Identities = 78/179 (43%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Frame = -1
Query: 526 NKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPLE 347
NKV R+WQNTEEEEFDWEDMSPTL+ LPSS GS RP F + E
Sbjct: 435 NKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDFLPSSIPPFGSVVPRPAFGRLSAIHAE 494
Query: 346 NDFR--RSSWAGWAQLSASNGSSIGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
+D R RSS A A + S S+I E+ V +GSGRG +KI R E + GS + E
Sbjct: 495 SDIRSNRSSLAPMASVDGS--SNIAEEAVSILGSGRGSTSKIPGFRTERNQILGSRHHQE 552
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPFFAS-----GGEQKPPIINDFPGVGVQRGSS 11
+WNFP ++ Q S NSK GR+FQ+P S GGE P+ P + Q S
Sbjct: 553 AWNFPPHIHQ-SAHLLNSKGRGRDFQMPLSGSGVSSLGGENYSPLAEKLPDIDAQLNRS 610
>XP_011037702.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Populus euphratica] XP_011037703.1
PREDICTED: polyadenylation and cleavage factor homolog
4-like isoform X2 [Populus euphratica] XP_011037704.1
PREDICTED: polyadenylation and cleavage factor homolog
4-like isoform X3 [Populus euphratica]
Length = 1053
Score = 124 bits (312), Expect = 7e-30
Identities = 78/179 (43%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Frame = -1
Query: 526 NKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPLE 347
NKV R+WQNTEEEEFDWEDMSPTL+ LPSS GS RP F + E
Sbjct: 435 NKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDFLPSSIPPFGSVVPRPAFGRLSAIHAE 494
Query: 346 NDFR--RSSWAGWAQLSASNGSSIGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
+D R RSS A A + S S+I E+ V +GSGRG +KI R E + GS + E
Sbjct: 495 SDIRSNRSSLAPMASVDGS--SNIAEEAVSILGSGRGSTSKIPGFRTERNQILGSRHHQE 552
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPFFAS-----GGEQKPPIINDFPGVGVQRGSS 11
+WNFP ++ Q S NSK GR+FQ+P S GGE P+ P + Q S
Sbjct: 553 AWNFPPHIHQ-SAHLLNSKGRGRDFQMPLSGSGVSSLGGENYSPLAEKLPDIDAQLNRS 610
>CDO99723.1 unnamed protein product [Coffea canephora]
Length = 1005
Score = 124 bits (311), Expect = 1e-29
Identities = 70/168 (41%), Positives = 97/168 (57%), Gaps = 4/168 (2%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
+ ++TWQNTEEEEF+WEDMSPTL S N L SS S +F TRPGF TH L
Sbjct: 393 NKSASLKTWQNTEEEEFNWEDMSPTLGDSSRNNDLFSSSIPPSANFRTRPGFRTHPDPHL 452
Query: 349 ENDFRRSSWAGWAQLSASNGSSIGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLES 170
RS+++ AQL + SS E+ V ++ S RG+I K+ R+E H SH P +
Sbjct: 453 ATSDFRSNFSKQAQLPIFSDSSPSEN-VSAVSSVRGVIKKVAGFRDENKHVSSSHFPKDG 511
Query: 169 WNFPQNLPQLSQKNYNSKQGGRNFQLPF----FASGGEQKPPIINDFP 38
++ PQ+ + SQ++ + K GRN Q+ F A E KPP +++FP
Sbjct: 512 FSMPQSHGRSSQQHLSIKGSGRNHQMSFSGMGIAPSSEYKPPSVSNFP 559
>GAV85191.1 CTD_bind domain-containing protein [Cephalotus follicularis]
Length = 1006
Score = 120 bits (300), Expect = 3e-28
Identities = 79/174 (45%), Positives = 96/174 (55%), Gaps = 6/174 (3%)
Frame = -1
Query: 526 NKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPLE 347
N+V R+WQNTEEEEF+WEDMSPTLA S + LPSS SG RPG N P E
Sbjct: 399 NEVAPRSWQNTEEEEFNWEDMSPTLADRSKSNDFLPSSVPISGRIGARPGIGKFNSIPSE 458
Query: 346 NDFRRSSWAGWAQLSASNGSS-IGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLES 170
+ RS G QL N SS I ED V S+GSGRG KI +N S G H ES
Sbjct: 459 SGI-RSKRTGQVQLPLVNDSSIIAEDAVLSMGSGRGQTGKITGFQNGPSQVLGPHYLPES 517
Query: 169 WNFPQNLPQLSQKNYNSKQGGRNFQLPFFA-----SGGEQKPPIINDFPGVGVQ 23
+F Q S +N+++ GR+FQ+PF A SGGE+ P ++ F VQ
Sbjct: 518 RSFLHYTSQTSPL-FNARKRGRDFQIPFSASVISTSGGEKMAPPMDKFADADVQ 570
>XP_011000684.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Populus euphratica]
Length = 980
Score = 118 bits (295), Expect = 1e-27
Identities = 68/173 (39%), Positives = 90/173 (52%), Gaps = 5/173 (2%)
Frame = -1
Query: 526 NKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPLE 347
+KV R+WQNTEEEEFDWEDMSPTL + LP S GS RPGF N +
Sbjct: 372 DKVAPRSWQNTEEEEFDWEDMSPTLLDRGRSNDFLPPSVPPFGSVVPRPGFGRLNAIRAD 431
Query: 346 NDFRRSSWAGWAQLSASNGSSIGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLESW 167
D R + + + S++G D V +G G G NK+ L E +H GS E+W
Sbjct: 432 CDIRSNGSSVTPMALVDDSSNMGGDAVSILGPGHGSTNKMPGLLTERNHISGSRYSQEAW 491
Query: 166 NFPQNLPQLSQKNYNSKQGGRNFQLPFFAS-----GGEQKPPIINDFPGVGVQ 23
NFP ++ Q S N+K GR+FQ+P S GGE P+++ P + Q
Sbjct: 492 NFPPHIRQPSHL-LNAKGRGRDFQMPLSGSGVSSMGGENFNPLVDKLPDMDAQ 543
>XP_012091393.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Jatropha
curcas] KDP20781.1 hypothetical protein JCGZ_21252
[Jatropha curcas]
Length = 1029
Score = 115 bits (287), Expect = 2e-26
Identities = 70/169 (41%), Positives = 93/169 (55%), Gaps = 6/169 (3%)
Frame = -1
Query: 526 NKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPLE 347
NKV R WQNTEEEEFDWEDMSPTLA + + L SS G TRPGF T L+
Sbjct: 426 NKVAPRLWQNTEEEEFDWEDMSPTLADRNRSNDFLSSSVPPFGGVGTRPGFGTRGPSQLD 485
Query: 346 NDFRRSSWAGWAQLSASNGSS-IGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLES 170
+D RS+ + AQLS + SS I ED +P +GSGRG K+ + E + SH P E+
Sbjct: 486 SDI-RSNRSAQAQLSLIDDSSDIAEDSIPILGSGRGSTAKLPGFQPERNQIMASHYPREA 544
Query: 169 WNFPQNLPQLSQKNYNSKQGGRNFQLPF-----FASGGEQKPPIINDFP 38
W + PQ + N+K R F++PF +S + P+++ P
Sbjct: 545 WKLLNHYPQ--STDLNAKGRNREFRMPFSRSVISSSVSDSLAPLVDKLP 591
>XP_010101465.1 hypothetical protein L484_012890 [Morus notabilis] EXB88448.1
hypothetical protein L484_012890 [Morus notabilis]
Length = 1022
Score = 114 bits (286), Expect = 2e-26
Identities = 66/144 (45%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
D++ +WQNTEEEEFDWEDMSPTLA + L SS S SF RP
Sbjct: 327 DHRPSSMSWQNTEEEEFDWEDMSPTLADHGRSEDFLQSSVSSLRSFKPRPDI-------- 378
Query: 349 ENDFRRSSWAGWAQLSASNGSSI-GEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
R+SW+G AQL A++ SSI ED VPS+G GRGL+ I + +NE +H S P E
Sbjct: 379 -----RNSWSGQAQLPAADDSSIVSEDAVPSLGFGRGLLGNISRFQNEPNHNLVSRRPQE 433
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRN 101
WN P L Q SQ + +GG N
Sbjct: 434 PWNMPHQLSQPSQHINSRGRGGEN 457
>XP_017236138.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Daucus carota subsp. sativus]
Length = 922
Score = 112 bits (279), Expect = 2e-25
Identities = 62/133 (46%), Positives = 79/133 (59%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
+NK+ V+TW++ EEEEF WEDMSPTLA+G+L + L S SG TT PG E + +
Sbjct: 415 NNKMAVQTWKDNEEEEFKWEDMSPTLATGNLKSSLFSQSNPMSGILTTVPGVEPQHPVLM 474
Query: 349 ENDFRRSSWAGWAQLSASNGSSIGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLES 170
EN FRR +G Q+SA + SS D V GL N I+ +RNE S FP S NP E
Sbjct: 475 ENSFRRGHQSGREQMSAFSDSSQITDSV------HGLTNNIYGVRNEGSQFPTSRNPPEV 528
Query: 169 WNFPQNLPQLSQK 131
WN P + + QK
Sbjct: 529 WNIPPSSQRNLQK 541
>XP_008384033.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X2 [Malus domestica] XP_008358744.1 PREDICTED:
polyadenylation and cleavage factor homolog 4-like
isoform X2 [Malus domestica]
Length = 794
Score = 111 bits (277), Expect = 3e-25
Identities = 69/166 (41%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
D+K +WQNTEEEEFDWED++P LA L S+ S S+ G T N L
Sbjct: 387 DHKATPMSWQNTEEEEFDWEDVTPNLADHGRGNDFLASTVXPSRSYRASHG--TQNASSL 444
Query: 349 ENDFRRSSWAGWAQL-SASNGSSIGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
E D R S+W+ A SA S I ED VPS+G GRG + + ++E++H GS P E
Sbjct: 445 EPDVR-STWSSQAHPPSAEQSSIIAEDSVPSLGFGRGSSGAVSRFQSEKNHNMGSRYPQE 503
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPFFASG---GEQKPPIIND 44
+WN P + Q Q N+K G N Q PF SG G +K ND
Sbjct: 504 AWNMPFHHLQPLQNPLNAKGRGGNIQTPFVTSGISSGGEKMSAFND 549
>XP_008358743.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Malus domestica]
Length = 976
Score = 111 bits (277), Expect = 4e-25
Identities = 69/166 (41%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Frame = -1
Query: 529 DNKVGVRTWQNTEEEEFDWEDMSPTLASGSLNTYLLPSSTLSSGSFTTRPGFETHNLFPL 350
D+K +WQNTEEEEFDWED++P LA L S+ S S+ G T N L
Sbjct: 387 DHKATPMSWQNTEEEEFDWEDVTPNLADHGRGNDFLASTVXPSRSYRASHG--TQNASSL 444
Query: 349 ENDFRRSSWAGWAQL-SASNGSSIGEDPVPSIGSGRGLINKIFKLRNEESHFPGSHNPLE 173
E D R S+W+ A SA S I ED VPS+G GRG + + ++E++H GS P E
Sbjct: 445 EPDVR-STWSSQAHPPSAEQSSIIAEDSVPSLGFGRGSSGAVSRFQSEKNHNMGSRYPQE 503
Query: 172 SWNFPQNLPQLSQKNYNSKQGGRNFQLPFFASG---GEQKPPIIND 44
+WN P + Q Q N+K G N Q PF SG G +K ND
Sbjct: 504 AWNMPFHHLQPLQNPLNAKGRGGNIQTPFVTSGISSGGEKMSAFND 549