BLASTX nr result
ID: Panax25_contig00036658
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00036658
(493 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KVH94402.1 Like-Sm (LSM) domain-containing protein, partial [Cyn... 60 3e-08
XP_018805729.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 59 3e-08
KZV36227.1 hypothetical protein F511_14245 [Dorcoceras hygrometr... 59 3e-08
XP_008350062.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 59 3e-08
XP_007201426.1 hypothetical protein PRUPE_ppa013592mg [Prunus pe... 59 3e-08
XP_004290666.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 59 4e-08
XP_002882537.1 predicted protein [Arabidopsis lyrata subsp. lyra... 58 4e-08
ONH93621.1 hypothetical protein PRUPE_8G242900 [Prunus persica] 59 4e-08
NP_001190664.1 Small nuclear ribonucleoprotein family protein [A... 59 4e-08
XP_002306766.1 small nuclear ribonucleoprotein D1 [Populus trich... 58 5e-08
XP_013697553.1 PREDICTED: probable small nuclear ribonucleoprote... 58 5e-08
XP_009134985.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 58 5e-08
GAV82725.1 LSM domain-containing protein [Cephalotus follicularis] 58 5e-08
XP_019164535.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 58 5e-08
XP_018847414.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 58 5e-08
XP_017969304.1 PREDICTED: small nuclear ribonucleoprotein Sm D1 ... 58 5e-08
JAT45157.1 Small nuclear ribonucleoprotein Sm D1 [Anthurium amni... 58 5e-08
OAY49685.1 hypothetical protein MANES_05G075000 [Manihot esculenta] 58 5e-08
XP_016708771.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 58 5e-08
XP_016708707.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-... 58 5e-08
>KVH94402.1 Like-Sm (LSM) domain-containing protein, partial [Cynara
cardunculus var. scolymus]
Length = 148
Score = 59.7 bits (143), Expect = 3e-08
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +1
Query: 106 AMKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
AMKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 34 AMKLVRFLMKLNNETVSIELKNGTVVHGTIT 64
>XP_018805729.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Juglans
regia]
Length = 114
Score = 58.5 bits (140), Expect = 3e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVNGTIT 30
>KZV36227.1 hypothetical protein F511_14245 [Dorcoceras hygrometricum]
Length = 114
Score = 58.5 bits (140), Expect = 3e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVNGTIT 30
>XP_008350062.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Malus
domestica] XP_009356762.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1 [Pyrus x bretschneideri]
Length = 114
Score = 58.5 bits (140), Expect = 3e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVNGTIT 30
>XP_007201426.1 hypothetical protein PRUPE_ppa013592mg [Prunus persica]
XP_008235260.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1 [Prunus mume] ONH93620.1
hypothetical protein PRUPE_8G242900 [Prunus persica]
Length = 114
Score = 58.5 bits (140), Expect = 3e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVNGTIT 30
>XP_004290666.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Fragaria
vesca subsp. vesca]
Length = 115
Score = 58.5 bits (140), Expect = 4e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVNGTIT 30
>XP_002882537.1 predicted protein [Arabidopsis lyrata subsp. lyrata] EFH58796.1
predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 102
Score = 58.2 bits (139), Expect = 4e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTIT 30
>ONH93621.1 hypothetical protein PRUPE_8G242900 [Prunus persica]
Length = 118
Score = 58.5 bits (140), Expect = 4e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVNGTIT 30
>NP_001190664.1 Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana] AEE82237.1 Small nuclear ribonucleoprotein
family protein [Arabidopsis thaliana]
Length = 126
Score = 58.5 bits (140), Expect = 4e-08
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTITE 201
MKLVRFLMKLNNETVSIELKNGT+V GTIT+
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTIVHGTITD 31
>XP_002306766.1 small nuclear ribonucleoprotein D1 [Populus trichocarpa]
XP_011032736.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1 [Populus euphratica] EEE93762.1
small nuclear ribonucleoprotein D1 [Populus trichocarpa]
Length = 112
Score = 58.2 bits (139), Expect = 5e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTIT 30
>XP_013697553.1 PREDICTED: probable small nuclear ribonucleoprotein Sm D1 isoform
X2 [Brassica napus]
Length = 113
Score = 58.2 bits (139), Expect = 5e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTIT 30
>XP_009134985.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Brassica
rapa] XP_013681309.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1-like [Brassica napus]
Length = 113
Score = 58.2 bits (139), Expect = 5e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTIT 30
>GAV82725.1 LSM domain-containing protein [Cephalotus follicularis]
Length = 114
Score = 58.2 bits (139), Expect = 5e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTIT 30
>XP_019164535.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Ipomoea nil]
XP_019197450.1 PREDICTED: small nuclear
ribonucleoprotein Sm D1-like [Ipomoea nil]
Length = 114
Score = 58.2 bits (139), Expect = 5e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTIT 30
>XP_018847414.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Juglans
regia]
Length = 114
Score = 58.2 bits (139), Expect = 5e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTIT 30
>XP_017969304.1 PREDICTED: small nuclear ribonucleoprotein Sm D1 isoform X2
[Theobroma cacao]
Length = 114
Score = 58.2 bits (139), Expect = 5e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTIT 30
>JAT45157.1 Small nuclear ribonucleoprotein Sm D1 [Anthurium amnicola]
Length = 114
Score = 58.2 bits (139), Expect = 5e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTIT 30
>OAY49685.1 hypothetical protein MANES_05G075000 [Manihot esculenta]
Length = 114
Score = 58.2 bits (139), Expect = 5e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTIT 30
>XP_016708771.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Gossypium
hirsutum]
Length = 114
Score = 58.2 bits (139), Expect = 5e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTIT 30
>XP_016708707.1 PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Gossypium
hirsutum]
Length = 114
Score = 58.2 bits (139), Expect = 5e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 109 MKLVRFLMKLNNETVSIELKNGTVVKGTIT 198
MKLVRFLMKLNNETVSIELKNGTVV GTIT
Sbjct: 1 MKLVRFLMKLNNETVSIELKNGTVVHGTIT 30