BLASTX nr result

ID: Panax25_contig00036135 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00036135
         (420 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017258530.1 PREDICTED: zinc finger protein VAR3, chloroplasti...    77   1e-13
CDP17638.1 unnamed protein product [Coffea canephora]                  66   5e-10
XP_011079114.1 PREDICTED: zinc finger protein VAR3, chloroplasti...    65   1e-09
XP_011079113.1 PREDICTED: zinc finger protein VAR3, chloroplasti...    65   1e-09
KZV16474.1 hypothetical protein F511_10086 [Dorcoceras hygrometr...    64   2e-09
XP_011071757.1 PREDICTED: zinc finger protein VAR3, chloroplasti...    63   8e-09
XP_012857367.1 PREDICTED: zinc finger protein VAR3, chloroplasti...    62   2e-08
XP_011070189.1 PREDICTED: zinc finger protein VAR3, chloroplasti...    59   2e-07
XP_019162700.1 PREDICTED: zinc finger protein VAR3, chloroplasti...    59   3e-07
XP_015060463.1 PREDICTED: zinc finger protein VAR3, chloroplasti...    56   2e-06

>XP_017258530.1 PREDICTED: zinc finger protein VAR3, chloroplastic [Daucus carota
           subsp. sativus] KZM91992.1 hypothetical protein
           DCAR_020643 [Daucus carota subsp. sativus]
          Length = 886

 Score = 76.6 bits (187), Expect = 1e-13
 Identities = 55/138 (39%), Positives = 70/138 (50%), Gaps = 35/138 (25%)
 Frame = +3

Query: 111 MGGATRFLLLLATPLSPFHPRRSAFSL------SPITRAPDYL---------FLPTNSHL 245
           M GATRFLL++ +PLS    RRS FSL      +P + +P ++          LP N++ 
Sbjct: 1   MAGATRFLLVVGSPLSLILHRRS-FSLYKRLSHTPFSHSPLHIRRNFNLSLQHLPINTNC 59

Query: 246 KE------------------DNYS*QQLQHPWPKWSELVHTLSP--AAEVHGIVPEDTFV 365
                               ++YS    QHPWP+WS  +HTLS   AAE  GIV +D FV
Sbjct: 60  SASSSQPLHTQSNSINDDHYNSYSGNNQQHPWPEWSNFIHTLSSSVAAEPQGIVSDDGFV 119

Query: 366 LYEYLSE*FVRSATSCLA 419
             EYLS  FV  A SCLA
Sbjct: 120 SNEYLSREFVDDAASCLA 137


>CDP17638.1 unnamed protein product [Coffea canephora]
          Length = 495

 Score = 66.2 bits (160), Expect = 5e-10
 Identities = 50/146 (34%), Positives = 65/146 (44%), Gaps = 43/146 (29%)
 Frame = +3

Query: 111 MGGATRFLLLLATPLSPFHPRRSAFSLSPITRAPDY-------------------LFLPT 233
           MGGA+R ++LL TP  PF  + S   L PITR                       L LPT
Sbjct: 1   MGGASRLIMLLTTPFPPFLHQPSLIFLRPITRCLSTSTTSRRLTLSTPYSHTQRRLLLPT 60

Query: 234 NSHLKEDNYS*QQLQ---------------HPWPKWSELVH-------TLSPAAEVHGIV 347
                   ++ Q+L                HPWP+WS L++        LSP A+   + 
Sbjct: 61  TKSCSRQLHA-QRLNAPSISPYKAASAASNHPWPEWSNLINKLFFSQEKLSPGADDQKVH 119

Query: 348 PEDTFVLYEY--LSE*FVRSATSCLA 419
           PED FV+YE   LSE F+R A+ CLA
Sbjct: 120 PEDAFVVYELKELSEEFIRCASLCLA 145


>XP_011079114.1 PREDICTED: zinc finger protein VAR3, chloroplastic isoform X2
           [Sesamum indicum]
          Length = 858

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 26/128 (20%)
 Frame = +3

Query: 114 GGATRFLLLLATPLSPFHP-------RRSAFSLSPI----------TRAPDYLFLPT-NS 239
           GG TRF+ LL TP  P  P       R S+ S +P+          T+ P    L + +S
Sbjct: 3   GGVTRFMTLLITPFPPLRPSLILLNRRVSSLSAAPVRLLTLSSPPNTKPPTPQLLNSFHS 62

Query: 240 HLKEDNY---S*QQLQHPWPKWSELVHTL-----SPAAEVHGIVPEDTFVLYEYLSE*FV 395
               + Y   S     HPWP+W+  +  L     + A E + I+PED FV+YE L + FV
Sbjct: 63  QSSNNTYTLSSSAAQHHPWPEWTHFLSVLPSGQGASAPEEYRILPEDAFVVYEELPDDFV 122

Query: 396 RSATSCLA 419
           R+A +CLA
Sbjct: 123 RAAATCLA 130


>XP_011079113.1 PREDICTED: zinc finger protein VAR3, chloroplastic isoform X1
           [Sesamum indicum]
          Length = 888

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 26/128 (20%)
 Frame = +3

Query: 114 GGATRFLLLLATPLSPFHP-------RRSAFSLSPI----------TRAPDYLFLPT-NS 239
           GG TRF+ LL TP  P  P       R S+ S +P+          T+ P    L + +S
Sbjct: 3   GGVTRFMTLLITPFPPLRPSLILLNRRVSSLSAAPVRLLTLSSPPNTKPPTPQLLNSFHS 62

Query: 240 HLKEDNY---S*QQLQHPWPKWSELVHTL-----SPAAEVHGIVPEDTFVLYEYLSE*FV 395
               + Y   S     HPWP+W+  +  L     + A E + I+PED FV+YE L + FV
Sbjct: 63  QSSNNTYTLSSSAAQHHPWPEWTHFLSVLPSGQGASAPEEYRILPEDAFVVYEELPDDFV 122

Query: 396 RSATSCLA 419
           R+A +CLA
Sbjct: 123 RAAATCLA 130


>KZV16474.1 hypothetical protein F511_10086 [Dorcoceras hygrometricum]
          Length = 729

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 48/135 (35%), Positives = 62/135 (45%), Gaps = 32/135 (23%)
 Frame = +3

Query: 111 MGGATRFLLLLATPLSPFHP-------RRSAFSLSPITR----------------APDYL 221
           MGGATRF+ LLA P  P  P       R S  + SP+                     + 
Sbjct: 1   MGGATRFITLLAAPFPPLRPSLLLLRHRLSTLTASPLRPFTLSSSCKTKSRTSHLVSSFH 60

Query: 222 FLPTNS--HLKEDNYS*QQLQHPWPKWSELVHTLS-------PAAEVHGIVPEDTFVLYE 374
             P NS  +L     S QQ  HPWP+W+  ++ LS       P+     I PED FV+YE
Sbjct: 61  SQPNNSAYNLNLSANSQQQHHHPWPEWTHFLNFLSDRQGWSAPSPVDLKIPPEDAFVVYE 120

Query: 375 YLSE*FVRSATSCLA 419
            L E FV +A++CLA
Sbjct: 121 ELPEDFVVAASNCLA 135


>XP_011071757.1 PREDICTED: zinc finger protein VAR3, chloroplastic-like [Sesamum
           indicum]
          Length = 700

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 45/135 (33%), Positives = 60/135 (44%), Gaps = 32/135 (23%)
 Frame = +3

Query: 111 MGGATRFLLLLATPLSPFHPRR---------------SAFSLSPITRAPDYLFLPTNSHL 245
           MG A R   LL  P  PFH                  S F+LS +++   +     NS  
Sbjct: 1   MGSAARLRTLLRAPFPPFHQSLFLFCHRLFVLSSSPVSIFTLSSLSKTESHAPQSVNSFH 60

Query: 246 KE--DNYS*----------QQLQHPWPKWSELVHTLSPAAEVH-----GIVPEDTFVLYE 374
            +  +NY+           QQ  HPW +W   +  LS    +H     GI+PED FV+YE
Sbjct: 61  SQLGNNYACLLHSSAAQNQQQHDHPWSEWRHFLQILSNGQGLHVPADNGILPEDAFVVYE 120

Query: 375 YLSE*FVRSATSCLA 419
            + + FVRSA SCLA
Sbjct: 121 EVLDDFVRSAASCLA 135


>XP_012857367.1 PREDICTED: zinc finger protein VAR3, chloroplastic [Erythranthe
           guttata] EYU20886.1 hypothetical protein
           MIMGU_mgv1a003196mg [Erythranthe guttata]
          Length = 601

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 30/133 (22%)
 Frame = +3

Query: 111 MGGATRFLLLLATPLSPFHP-------RRSAFSLSPI----------TRAPDYLFLPTNS 239
           MGGATRF+ LL  P     P       R S  + +P           T+    L L  + 
Sbjct: 1   MGGATRFMTLLTAPFPTLRPSLIIIHRRFSLIATTPFRLLTLYPPSKTKTRTRLLLGKSF 60

Query: 240 HLKEDNYS*--------QQLQHPWPKWSELVHTLS-----PAAEVHGIVPEDTFVLYEYL 380
           H +  N +         QQ  HPWP+W+  +  LS      + E  GI PED FV+YE L
Sbjct: 61  HSQPSNNAFTLPASAAQQQHHHPWPEWNHFLDLLSNGQGFASPENLGIPPEDAFVVYEEL 120

Query: 381 SE*FVRSATSCLA 419
           ++ FV +A++C+A
Sbjct: 121 TDDFVAAASTCIA 133


>XP_011070189.1 PREDICTED: zinc finger protein VAR3, chloroplastic-like [Sesamum
           indicum]
          Length = 598

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 45/134 (33%), Positives = 59/134 (44%), Gaps = 31/134 (23%)
 Frame = +3

Query: 111 MGGATRFLLLLATPLSPFHPRR---------------SAFSLSPITRAPDYLFLPTNS-H 242
           MGGA R + LL  P  PFH                  S F+LS +++   +     NS H
Sbjct: 1   MGGAARLMNLLRAPFPPFHQSLFLFRCRLFVLSSSPVSIFTLSSLSKTESHAPQSVNSFH 60

Query: 243 LKEDNYS*----------QQLQHPWPKWSELVHTLSPAAEVH-----GIVPEDTFVLYEY 377
            +  N +           QQ  H W +W   +  LS    +H      I+PED FV+YE 
Sbjct: 61  SQPGNDAYLLHSSAAQIQQQHDHLWSEWRHFLQILSNGQGLHVPADNRILPEDAFVVYEE 120

Query: 378 LSE*FVRSATSCLA 419
           L + FVRSA SCLA
Sbjct: 121 LFDDFVRSAASCLA 134


>XP_019162700.1 PREDICTED: zinc finger protein VAR3, chloroplastic [Ipomoea nil]
          Length = 819

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
 Frame = +3

Query: 153 LSPFHPRRSAFSLSPITRAPDYLF---LPTNSHLKEDNYS*QQLQHPWPKWSELVHTLSP 323
           L+ + P   +  L+PIT +        LP NS+      S     HPWP+W  L++ LS 
Sbjct: 46  LALYSPPHFSSPLTPITTSQQQFHSQALPVNSNNALS--SSPSTAHPWPEWCNLINALSA 103

Query: 324 A--AEVHGIV-PEDTFVLYEYLSE*FVRSATSCLA 419
           +  AE HG++  ED FV Y+ L + FVR+AT+CLA
Sbjct: 104 SGRAEEHGLIHEEDAFVAYQQLPDDFVRAATACLA 138


>XP_015060463.1 PREDICTED: zinc finger protein VAR3, chloroplastic [Solanum
           pennellii]
          Length = 872

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
 Frame = +3

Query: 120 ATRFLLLLATPLSPF--HPRRSAF-------------------SLSPITRAPDYLFL-PT 233
           A+RF+ LL TP   F  H RR +F                    +SP++ +       P 
Sbjct: 2   ASRFISLLGTPFPTFLNHLRRPSFLHLRRLACGSRRFTVYSHPHISPLSPSQQQFHAQPI 61

Query: 234 NSHLKEDNYS*QQLQHPWPKWSELVHTLSPAAEVHGIVPE-DTFVLYEYLSE*FVRSATS 410
           N++   D++S     HPWP+W  L+  L+   ++   V + D+FV YE LS+ F+R+AT 
Sbjct: 62  NNNTPLDSFSSSFTSHPWPEWRSLITLLTGNDQLPPAVEDSDSFVTYEELSQDFLRAATL 121

Query: 411 CL 416
           CL
Sbjct: 122 CL 123


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