BLASTX nr result
ID: Panax25_contig00035803
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00035803
(1115 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KVH88101.1 Aspartate decarboxylase-like domain-containing protei... 177 3e-88
XP_011089162.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 167 8e-88
XP_012068654.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 168 3e-83
KDP40529.1 hypothetical protein JCGZ_24528 [Jatropha curcas] 168 3e-83
XP_009361958.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 169 4e-83
XP_015876223.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 164 1e-82
XP_007218881.1 hypothetical protein PRUPE_ppa000088mg [Prunus pe... 167 2e-82
XP_008348950.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 167 5e-82
XP_008231662.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 169 2e-81
OMP00131.1 RNA polymerase, alpha subunit [Corchorus capsularis] 153 2e-79
OMO87191.1 RNA polymerase, alpha subunit [Corchorus olitorius] 153 4e-79
XP_011655250.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 154 8e-79
XP_010032299.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 153 1e-78
XP_012449583.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 155 5e-78
XP_008465860.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 154 5e-78
XP_012449584.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 155 5e-78
XP_017257953.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 234 3e-74
XP_017225052.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 234 3e-74
XP_006420718.1 hypothetical protein CICLE_v10004129mg [Citrus cl... 211 3e-65
GAV75269.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1... 213 2e-64
>KVH88101.1 Aspartate decarboxylase-like domain-containing protein [Cynara
cardunculus var. scolymus]
Length = 1495
Score = 177 bits (448), Expect(4) = 3e-88
Identities = 96/163 (58%), Positives = 118/163 (72%), Gaps = 7/163 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPFCENYPYEELRVVRSCLFDGLNPYQVMIHS 294
FLG+Q+ ++ R YS+TL +D++S+FL YPF + YP EE +VRSCLF GL+PYQ M+HS
Sbjct: 705 FLGLQILEKGRLYSRTLAEDLSSHFLGNYPFPDKYPSEEFGLVRSCLFHGLDPYQEMVHS 764
Query: 293 **RSDRSFIKR----VAEPETLFNNLMALLRD-VICYAGTIRNVCSN*IIQFEYGTQT*T 129
+ R + R + EP TLF NLMA+LRD VICY GT+RNVCSN IIQFEYG +
Sbjct: 765 --IASREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVK--- 819
Query: 128 MTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
T +FAA EPVGVLA T + NPAYKA DSSP+SN SW MMK
Sbjct: 820 -TQNLFAAGEPVGVLAATAMSNPAYKAVLDSSPNSNSSWNMMK 861
Score = 87.8 bits (216), Expect(4) = 3e-88
Identities = 47/79 (59%), Positives = 57/79 (72%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
F VP VL SI I VS LLY+L S+YNE+I LQLEKH R V ++ FIL+ S+M N
Sbjct: 627 FIVPKNVLRSIEAEIQEVSSLLYHLRSNYNEVIALQLEKHLRVVKGPISEFILRFSSMGN 686
Query: 526 LIDSKSDSAINKVVQQIIF 470
LIDSKSDSA+ ++VQQI F
Sbjct: 687 LIDSKSDSAVTRIVQQIGF 705
Score = 70.5 bits (171), Expect(4) = 3e-88
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = -3
Query: 1023 MFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
+FK YFF +A QQLAL+ +LP+P++L+ SGPLWT+L+LL+T+LP FD
Sbjct: 505 LFKTYFFTKAQVQQLALFTSNSLPTPSMLKVHRSGPLWTVLELLETSLPRGFD 557
Score = 62.8 bits (151), Expect(4) = 3e-88
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDF 705
L L ++R ++ S++ND+ + IFF KGP EVL+ F LQP+LME L +GF+ LEDF
Sbjct: 571 LKLDYSRDVIQSIVNDVISSIFFSKGPKEVLKLFNSLQPMLMENLCCEGFNLSLEDF 627
>XP_011089162.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Sesamum indicum]
Length = 2096
Score = 167 bits (422), Expect(4) = 8e-88
Identities = 94/163 (57%), Positives = 116/163 (71%), Gaps = 7/163 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPFCENYPYEELRVVRSCLFDGLNPYQVMIHS 294
FLG+Q+SD+ +FYS+ LV D++S F +KYP C++YP EE +V LF GL+PYQ M+HS
Sbjct: 691 FLGVQISDKGKFYSEMLVKDMSSLFQKKYPSCDDYPTEEFGLVGRPLFRGLDPYQEMVHS 750
Query: 293 **RSDRSFIKR----VAEPETLFNNLMALLRD-VICYAGTIRNVCSN*IIQFEYGTQT*T 129
S R I R + EP TLF NLMA+LRD VICY GT+RN+CSN IIQFEYG +
Sbjct: 751 --ISSREVIVRSTRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIIQFEYGVSSAN 808
Query: 128 MTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
+ + F A +PVGVLA T + NPAYKA DSSPSSN SW MMK
Sbjct: 809 IA-SEFCAGDPVGVLAATAMSNPAYKAVLDSSPSSNSSWEMMK 850
Score = 88.2 bits (217), Expect(4) = 8e-88
Identities = 44/79 (55%), Positives = 63/79 (79%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
FF+P +VL+SI I +SPLLY+L +SY+E I+LQL+ + R + + V +F+LKSSA+ +
Sbjct: 613 FFLPRDVLESIQENIQKISPLLYHLRASYSESIDLQLDTYLRSMKIPVTNFVLKSSAIGH 672
Query: 526 LIDSKSDSAINKVVQQIIF 470
LIDSKS+SA++KVVQQI F
Sbjct: 673 LIDSKSESALSKVVQQIGF 691
Score = 78.6 bits (192), Expect(4) = 8e-88
Identities = 38/58 (65%), Positives = 44/58 (75%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFF 702
L L FNR +M S+LNDI T +FF KGP EVLRFF +QP+LME LYS+GFS L DFF
Sbjct: 557 LSLEFNRDVMASILNDIVTSLFFLKGPKEVLRFFNSIQPLLMESLYSEGFSVSLRDFF 614
Score = 62.8 bits (151), Expect(4) = 8e-88
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
++ +NYF NRA AQQLA++ LP PA++++ +SGPLWT Q+LQT LP +FD
Sbjct: 491 ILLRNYFLNRAAAQQLAMFVPSVLPKPAVVKS-DSGPLWTASQILQTTLPSSFD 543
>XP_012068654.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha curcas]
Length = 1980
Score = 168 bits (426), Expect(4) = 3e-83
Identities = 93/164 (56%), Positives = 116/164 (70%), Gaps = 8/164 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPF-CENYPYEELRVVRSCLFDGLNPYQVMIH 297
FLG+Q+SDR +FYSKTLV+D+ S+F KYP YP + +++SC F GL+PY+ M+H
Sbjct: 713 FLGLQISDRGKFYSKTLVEDMVSHFERKYPSEVVEYPSAQYGLIQSCFFHGLDPYEEMVH 772
Query: 296 S**RSDRSFIKR----VAEPETLFNNLMALLRDV-ICYAGTIRNVCSN*IIQFEYGTQT* 132
S S R I R ++EP TLF NLMA+LRDV ICY GT+RNVCSN IIQFEYG +
Sbjct: 773 S--ISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKAG 830
Query: 131 TMTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
++F A EPVGVLA T + NPAYKA DS+PSSN SW +MK
Sbjct: 831 IKAQSLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMK 874
Score = 83.2 bits (204), Expect(4) = 3e-83
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = -2
Query: 703 FVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDNL 524
++ V++SIH +SPLL L S+YNEL+ELQLE H R V + VA FI++SS++ +L
Sbjct: 636 YISRAVIESIHKDFKVISPLLSQLRSTYNELVELQLENHIRQVKLRVAEFIVRSSSIGDL 695
Query: 523 IDSKSDSAINKVVQQIIF 470
ID KSDSA+ KVVQQI F
Sbjct: 696 IDYKSDSAMTKVVQQIGF 713
Score = 65.5 bits (158), Expect(4) = 3e-83
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = -3
Query: 1023 MFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
MFK YF +RA AQQLA++ +LP P L + S P+WT+LQ+LQTALP FD
Sbjct: 513 MFKAYFLDRAAAQQLAMFVSFSLPQPTLWKVPYSDPIWTVLQILQTALPSQFD 565
Score = 63.9 bits (154), Expect(4) = 3e-83
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = -1
Query: 869 LTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
+ F+R ++ SV+N+I IFF KGP+ V +FF LQP+LME L+S+GFS LED + S
Sbjct: 581 IDFSRDVVQSVINEIVISIFFEKGPDAVFKFFNSLQPLLMENLFSEGFSVCLEDLYIS 638
>KDP40529.1 hypothetical protein JCGZ_24528 [Jatropha curcas]
Length = 1821
Score = 168 bits (426), Expect(4) = 3e-83
Identities = 93/164 (56%), Positives = 116/164 (70%), Gaps = 8/164 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPF-CENYPYEELRVVRSCLFDGLNPYQVMIH 297
FLG+Q+SDR +FYSKTLV+D+ S+F KYP YP + +++SC F GL+PY+ M+H
Sbjct: 554 FLGLQISDRGKFYSKTLVEDMVSHFERKYPSEVVEYPSAQYGLIQSCFFHGLDPYEEMVH 613
Query: 296 S**RSDRSFIKR----VAEPETLFNNLMALLRDV-ICYAGTIRNVCSN*IIQFEYGTQT* 132
S S R I R ++EP TLF NLMA+LRDV ICY GT+RNVCSN IIQFEYG +
Sbjct: 614 S--ISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKAG 671
Query: 131 TMTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
++F A EPVGVLA T + NPAYKA DS+PSSN SW +MK
Sbjct: 672 IKAQSLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMK 715
Score = 83.2 bits (204), Expect(4) = 3e-83
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = -2
Query: 703 FVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDNL 524
++ V++SIH +SPLL L S+YNEL+ELQLE H R V + VA FI++SS++ +L
Sbjct: 477 YISRAVIESIHKDFKVISPLLSQLRSTYNELVELQLENHIRQVKLRVAEFIVRSSSIGDL 536
Query: 523 IDSKSDSAINKVVQQIIF 470
ID KSDSA+ KVVQQI F
Sbjct: 537 IDYKSDSAMTKVVQQIGF 554
Score = 65.5 bits (158), Expect(4) = 3e-83
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = -3
Query: 1023 MFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
MFK YF +RA AQQLA++ +LP P L + S P+WT+LQ+LQTALP FD
Sbjct: 354 MFKAYFLDRAAAQQLAMFVSFSLPQPTLWKVPYSDPIWTVLQILQTALPSQFD 406
Score = 63.9 bits (154), Expect(4) = 3e-83
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = -1
Query: 869 LTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
+ F+R ++ SV+N+I IFF KGP+ V +FF LQP+LME L+S+GFS LED + S
Sbjct: 422 IDFSRDVVQSVINEIVISIFFEKGPDAVFKFFNSLQPLLMENLFSEGFSVCLEDLYIS 479
>XP_009361958.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Pyrus x
bretschneideri] XP_009361959.1 PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Pyrus x bretschneideri]
Length = 1960
Score = 169 bits (427), Expect(4) = 4e-83
Identities = 92/163 (56%), Positives = 114/163 (69%), Gaps = 7/163 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPFCENYPYEELRVVRSCLFDGLNPYQVMIHS 294
FLG+QLSD+ RFYSKTLV+D+ S + KY F YP E +V+SC F GL+PY+ ++HS
Sbjct: 705 FLGLQLSDKGRFYSKTLVEDVASLYHNKYSFNMEYPSAEYGLVQSCFFHGLDPYEEIVHS 764
Query: 293 **RSDRSFIKR----VAEPETLFNNLMALLRD-VICYAGTIRNVCSN*IIQFEYGTQT*T 129
+ R I R + EP TLF NLMA+LRD VICY GT+RNVCSN +IQFEYG + +
Sbjct: 765 --IATREVIVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSVIQFEYGVNSGS 822
Query: 128 MTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
+F A EPVGVLA T + NPAYKA DS+PSSN SW +MK
Sbjct: 823 RPPNLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMK 865
Score = 78.2 bits (191), Expect(4) = 4e-83
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
F++ + I I + S LLY+L S+YNE +E QLE +++ + V+ FIL+SSA +
Sbjct: 627 FYMSKTSIQDIQKNIQDTSDLLYHLRSTYNEFVEFQLESRIKNLKVPVSCFILESSAFGD 686
Query: 526 LIDSKSDSAINKVVQQIIF 470
LIDSKSDSAINKVVQQI F
Sbjct: 687 LIDSKSDSAINKVVQQIGF 705
Score = 67.8 bits (164), Expect(4) = 4e-83
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFDF 862
+MFKNYF +++ AQQLA++ +LP PALL+A + WT LQ+LQTALP +FD+
Sbjct: 504 MMFKNYFLDKSAAQQLAMFASSSLPRPALLKANAARSYWTALQILQTALPAHFDY 558
Score = 65.9 bits (159), Expect(4) = 4e-83
Identities = 30/61 (49%), Positives = 45/61 (73%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
L + F+ + +V+ND+ T +FF KG +VL+FF LQP+LME ++S+GFS GLEDF+ S
Sbjct: 571 LKIDFSTSEVSAVMNDVATSVFFEKGGEDVLKFFDSLQPLLMENIFSEGFSVGLEDFYMS 630
Query: 695 E 693
+
Sbjct: 631 K 631
>XP_015876223.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Ziziphus jujuba]
Length = 1967
Score = 164 bits (414), Expect(5) = 1e-82
Identities = 90/164 (54%), Positives = 115/164 (70%), Gaps = 8/164 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPFCE-NYPYEELRVVRSCLFDGLNPYQVMIH 297
FLG+Q+SD+ +FY+KTLV+D++S + KYPF +YP E +V+SC F GL+PY+ M+H
Sbjct: 701 FLGLQISDQGKFYTKTLVEDVSSLYKNKYPFERIDYPSVEYGLVKSCFFHGLDPYEEMVH 760
Query: 296 S**RSDRSFIKR----VAEPETLFNNLMALLRDVI-CYAGTIRNVCSN*IIQFEYGTQT* 132
S S R I R + EP TLF NLMA+LRDVI CY GT+RNVCSN IIQF+YG +T
Sbjct: 761 S--ISTREVIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTVRNVCSNSIIQFDYGLKTG 818
Query: 131 TMTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
T + EPVG+LA T + NPAYKA DS+PSS SW +MK
Sbjct: 819 TGPQNFYPPGEPVGMLAATAMSNPAYKAVLDSTPSSTSSWQLMK 862
Score = 82.8 bits (203), Expect(5) = 1e-82
Identities = 44/74 (59%), Positives = 57/74 (77%)
Frame = -2
Query: 691 EVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDNLIDSK 512
E + I I ++SPLL++L S++NEL+ELQLE H R V V +F+L+SSA+ +LIDSK
Sbjct: 628 ESIQQIQKGILDISPLLFHLKSTHNELLELQLESHIRVVKTPVINFVLESSALGDLIDSK 687
Query: 511 SDSAINKVVQQIIF 470
SDSAINKVVQQI F
Sbjct: 688 SDSAINKVVQQIGF 701
Score = 69.3 bits (168), Expect(5) = 1e-82
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDF 705
L L NR I+P V+ND+ T IFF +G EVL+FF LQP+LME+++S+GFS LEDF
Sbjct: 567 LRLDLNRDIIPVVINDMATSIFFERGSEEVLKFFNSLQPLLMEHMFSEGFSVSLEDF 623
Score = 60.8 bits (146), Expect(5) = 1e-82
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = -3
Query: 1023 MFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
+F +YF ++A AQQLA++ +LP PA L+A +S WT LQ+LQTALP FD
Sbjct: 501 LFNSYFMDKAAAQQLAMFASSSLPQPAFLKAYSSKHCWTALQILQTALPALFD 553
Score = 22.7 bits (47), Expect(5) = 1e-82
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2
Query: 1114 KLFSVVGKQLFSSHNG 1067
+LFSV KQL SSHNG
Sbjct: 470 ELFSVE-KQLLSSHNG 484
>XP_007218881.1 hypothetical protein PRUPE_ppa000088mg [Prunus persica] ONI20822.1
hypothetical protein PRUPE_2G035500 [Prunus persica]
ONI20823.1 hypothetical protein PRUPE_2G035500 [Prunus
persica] ONI20824.1 hypothetical protein PRUPE_2G035500
[Prunus persica]
Length = 1855
Score = 167 bits (424), Expect(4) = 2e-82
Identities = 93/163 (57%), Positives = 114/163 (69%), Gaps = 7/163 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPFCENYPYEELRVVRSCLFDGLNPYQVMIHS 294
FLG+QLSD+ RFYSKTLV+D+ S KYP +YP E +V+SC F GL+PY+ ++HS
Sbjct: 705 FLGLQLSDKGRFYSKTLVEDVASLCHSKYPSDIDYPSAEYGLVQSCFFHGLDPYEAIVHS 764
Query: 293 **RSDRSFIKR----VAEPETLFNNLMALLRDV-ICYAGTIRNVCSN*IIQFEYGTQT*T 129
+ R I R ++EP TLF NLMA+LRDV ICY GT+RNVCSN IIQFEYG +
Sbjct: 765 --IATREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNIGS 822
Query: 128 MTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
+F A EPVGVLA T + NPAYKA DS+PSSN SW +MK
Sbjct: 823 RPQHLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMK 865
Score = 78.2 bits (191), Expect(4) = 2e-82
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
F++ + I I + S LLY+L S+YNE +E QL+ R V + V+ FIL+SSA+ +
Sbjct: 627 FYMSRTSIQDIQKNIQDSSDLLYHLRSTYNEFVEFQLQNRIRSVKVPVSHFILESSALGD 686
Query: 526 LIDSKSDSAINKVVQQIIF 470
LIDSKSDSAINK+VQQI F
Sbjct: 687 LIDSKSDSAINKIVQQIGF 705
Score = 67.0 bits (162), Expect(4) = 2e-82
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
L + F+ + +V+NDI T +FF KG +VL+FF LQP+LME L+S+GFS GLEDF+ S
Sbjct: 571 LNIDFSTSSVAAVMNDIATSVFFEKGGEDVLKFFDSLQPLLMENLFSEGFSVGLEDFYMS 630
Score = 65.1 bits (157), Expect(4) = 2e-82
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
+MFK YF ++A AQQLA++ +LP PALL+A ++ WT Q+LQTALP +FD
Sbjct: 504 MMFKKYFLDKAAAQQLAMFASSSLPRPALLKANSAHSYWTAFQILQTALPAHFD 557
>XP_008348950.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Malus
domestica]
Length = 1144
Score = 167 bits (423), Expect(4) = 5e-82
Identities = 92/163 (56%), Positives = 112/163 (68%), Gaps = 7/163 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPFCENYPYEELRVVRSCLFDGLNPYQVMIHS 294
FLG+QLSD+ RFYSKTLV+D+ S KY F YP E +V+SC F GL+PY+ ++HS
Sbjct: 705 FLGLQLSDKGRFYSKTLVEDVASLCHNKYSFNSEYPSAEYGLVQSCFFHGLDPYEEIVHS 764
Query: 293 **RSDRSFIKR----VAEPETLFNNLMALLRDV-ICYAGTIRNVCSN*IIQFEYGTQT*T 129
+ R I R + EP TLF NLMA+LRDV ICY GT+RNVCSN +IQFEYG +
Sbjct: 765 --IATREVIVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSVIQFEYGVNAGS 822
Query: 128 MTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
+F A EPVGVLA T + NPAYKA DS+PSSN SW +MK
Sbjct: 823 RPPNLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMK 865
Score = 76.3 bits (186), Expect(4) = 5e-82
Identities = 40/79 (50%), Positives = 54/79 (68%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
F++ + I I S LLY+L S+YNE +E QLE + + + V++FIL+SSA +
Sbjct: 627 FYMSKTSIQDIKENIQGTSDLLYHLRSTYNEFVEFQLESRIKSLKVPVSNFILESSAFGD 686
Query: 526 LIDSKSDSAINKVVQQIIF 470
LID+KSDSAINKVVQQI F
Sbjct: 687 LIDTKSDSAINKVVQQIGF 705
Score = 67.0 bits (162), Expect(4) = 5e-82
Identities = 31/61 (50%), Positives = 45/61 (73%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
L + F+ + +V+NDI T +FF KG +VL+FF LQP+LME ++S+GFS GLEDF+ S
Sbjct: 571 LKIEFSTSAVSAVMNDIATSVFFEKGGEDVLKFFDSLQPLLMENIFSEGFSVGLEDFYMS 630
Query: 695 E 693
+
Sbjct: 631 K 631
Score = 66.2 bits (160), Expect(4) = 5e-82
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFDF 862
+MFKN+F +++ AQQLA++ LP PALL+A + WT LQ+LQTALPL+FD+
Sbjct: 504 MMFKNFFLDKSAAQQLAMFASSLLPRPALLKANAACSYWTALQILQTALPLDFDY 558
>XP_008231662.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Prunus mume]
Length = 1855
Score = 169 bits (429), Expect(4) = 2e-81
Identities = 94/163 (57%), Positives = 115/163 (70%), Gaps = 7/163 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPFCENYPYEELRVVRSCLFDGLNPYQVMIHS 294
FLG+QLSD+ RFYSKTLV+D+ S KYP +YP E +V+SC F GL+PY+ ++HS
Sbjct: 705 FLGLQLSDKGRFYSKTLVEDVASLCHSKYPSDIDYPSAEYGLVQSCFFHGLDPYEAIVHS 764
Query: 293 **RSDRSFIKR----VAEPETLFNNLMALLRDV-ICYAGTIRNVCSN*IIQFEYGTQT*T 129
+ R I R ++EP TLF NLMA+LRDV ICY GT+RNVCSN IIQFEYG T +
Sbjct: 765 --IATREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNTGS 822
Query: 128 MTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
+F A EPVGVLA T + NPAYKA DS+PSSN SW +MK
Sbjct: 823 RHQHLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMK 865
Score = 76.3 bits (186), Expect(4) = 2e-81
Identities = 41/79 (51%), Positives = 54/79 (68%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
F + + I I + S LLY+L S+YNE +E QL+ R V + V+ FIL+SSA+ +
Sbjct: 627 FSMSRASIQDIQKNIQDSSDLLYHLRSTYNEFVEFQLQNRIRSVKVPVSHFILESSALGD 686
Query: 526 LIDSKSDSAINKVVQQIIF 470
LIDSKSDSAINK+VQQI F
Sbjct: 687 LIDSKSDSAINKIVQQIGF 705
Score = 65.1 bits (157), Expect(4) = 2e-81
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
+MFK YF ++A AQQLA++ +LP PALL+A ++ WT Q+LQTALP +FD
Sbjct: 504 MMFKKYFLDKAAAQQLAMFASSSLPRPALLKANSAHSYWTAFQILQTALPAHFD 557
Score = 63.9 bits (154), Expect(4) = 2e-81
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
L + F+ + +V+NDI T +FF KG VL+FF LQP+LME L+S+GFS GLEDF S
Sbjct: 571 LNIDFSTSSVAAVMNDIATSVFFEKGGEAVLKFFDSLQPLLMENLFSEGFSVGLEDFSMS 630
>OMP00131.1 RNA polymerase, alpha subunit [Corchorus capsularis]
Length = 1928
Score = 153 bits (387), Expect(5) = 2e-79
Identities = 91/164 (55%), Positives = 109/164 (66%), Gaps = 8/164 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPF-CENYPYEELRVVRSCLFDGLNPYQVMIH 297
FLG QL D+ +FYSKTLVDD+ F YP +YP E +++SC F GL+PY+ M+H
Sbjct: 703 FLGQQLFDKGKFYSKTLVDDVAYQFQSIYPSDLVDYPSAEFGLIKSCFFRGLDPYEEMVH 762
Query: 296 S**RSDRSFIKR----VAEPETLFNNLMALLRD-VICYAGTIRNVCSN*IIQFEYGTQT* 132
S S R I R ++EP TLF NLMA+LRD VICY GT+RNV SN IIQF+YG
Sbjct: 763 S--ISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVNSNSIIQFQYGLN-- 818
Query: 131 TMTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
T F A EPVGVLA T + NPAYKA DS+PSSN SW +MK
Sbjct: 819 ARTKPQFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMK 862
Score = 83.6 bits (205), Expect(5) = 2e-79
Identities = 43/79 (54%), Positives = 55/79 (69%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
F + E ++ I + +SPLLY L S+YNEL+ LQ+E H R + VA+FI KSSA +
Sbjct: 625 FSISREAIEDIEKDVQLISPLLYQLRSTYNELVGLQIENHIREAKVPVANFIRKSSAFGD 684
Query: 526 LIDSKSDSAINKVVQQIIF 470
LIDSKSDSA+ KVVQQI F
Sbjct: 685 LIDSKSDSAVTKVVQQIGF 703
Score = 72.0 bits (175), Expect(5) = 2e-79
Identities = 34/60 (56%), Positives = 44/60 (73%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
L + F R +MPSV+N++ T IFF KGP EVL FF LQP+LME ++++GFS LEDF S
Sbjct: 569 LKVDFGRELMPSVINEVVTSIFFEKGPKEVLEFFDSLQPLLMENIFAEGFSLSLEDFSIS 628
Score = 57.0 bits (136), Expect(5) = 2e-79
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
+M K + F +A QQL++Y LP PALL+ + GP WT Q+LQTA P D
Sbjct: 502 VMLKTFLFKKADVQQLSMYLSSALPQPALLKGNSFGPCWTAFQILQTAFPACLD 555
Score = 22.7 bits (47), Expect(5) = 2e-79
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2
Query: 1114 KLFSVVGKQLFSSHNG 1067
+LFSV KQL SSHNG
Sbjct: 472 ELFSVE-KQLLSSHNG 486
>OMO87191.1 RNA polymerase, alpha subunit [Corchorus olitorius]
Length = 1956
Score = 153 bits (387), Expect(5) = 4e-79
Identities = 91/164 (55%), Positives = 109/164 (66%), Gaps = 8/164 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPF-CENYPYEELRVVRSCLFDGLNPYQVMIH 297
FLG QL D+ +FYSKTLVDD+ F YP +YP E +++SC F GL+PY+ M+H
Sbjct: 703 FLGQQLFDKGKFYSKTLVDDVAYQFQSIYPSDLVDYPSAEFGLIKSCFFRGLDPYEEMVH 762
Query: 296 S**RSDRSFIKR----VAEPETLFNNLMALLRD-VICYAGTIRNVCSN*IIQFEYGTQT* 132
S S R I R ++EP TLF NLMA+LRD VICY GT+RNV SN IIQF+YG
Sbjct: 763 S--ISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVNSNSIIQFQYGLN-- 818
Query: 131 TMTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
T F A EPVGVLA T + NPAYKA DS+PSSN SW +MK
Sbjct: 819 ARTKPQFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMK 862
Score = 83.6 bits (205), Expect(5) = 4e-79
Identities = 43/79 (54%), Positives = 55/79 (69%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
F + E ++ I + +SPLLY L S+YNEL+ LQ+E H R + VA+FI KSSA +
Sbjct: 625 FSISREAIEDIEKDVQLISPLLYQLRSTYNELVGLQIENHIREAKVPVANFIRKSSAFGD 684
Query: 526 LIDSKSDSAINKVVQQIIF 470
LIDSKSDSA+ KVVQQI F
Sbjct: 685 LIDSKSDSAVTKVVQQIGF 703
Score = 71.6 bits (174), Expect(5) = 4e-79
Identities = 34/60 (56%), Positives = 44/60 (73%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
L + F R +MPSV+N++ T IFF KGP EVL FF LQP+LME ++++GFS LEDF S
Sbjct: 569 LKVDFGRELMPSVINEVVTSIFFEKGPKEVLEFFDSLQPLLMENVFAEGFSLSLEDFSIS 628
Score = 56.2 bits (134), Expect(5) = 4e-79
Identities = 24/50 (48%), Positives = 32/50 (64%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALP 877
+M K + F +A QQL++Y LP PALL+ + GP WT Q+LQTA P
Sbjct: 502 VMLKTFLFKKADVQQLSMYLSSALPQPALLKGNSFGPCWTAFQILQTAFP 551
Score = 22.7 bits (47), Expect(5) = 4e-79
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2
Query: 1114 KLFSVVGKQLFSSHNG 1067
+LFSV KQL SSHNG
Sbjct: 472 ELFSVE-KQLLSSHNG 486
>XP_011655250.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus]
XP_011655251.1 PREDICTED: DNA-directed RNA polymerase V
subunit 1 [Cucumis sativus] KGN51090.1 hypothetical
protein Csa_5G435050 [Cucumis sativus]
Length = 1963
Score = 154 bits (390), Expect(4) = 8e-79
Identities = 89/165 (53%), Positives = 113/165 (68%), Gaps = 9/165 (5%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPFCE-NYPYEELRVVRSCLFDGLNPYQVMIH 297
FLG+QLSD+ RFYSK+L++D+ S F +Y + +YP E +V+ C F GL+PY+ M+H
Sbjct: 706 FLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVH 765
Query: 296 S**RSDRSFIKR----VAEPETLFNNLMALLRDV-ICYAGTIRNVCSN*IIQFEYGTQT* 132
S S R + R + EP TLF NLMA+LRDV ICY GT+RNVCSN IIQ EYG +
Sbjct: 766 S--ISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAG 823
Query: 131 TM-THTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
M +++F EPVGVLA T + PAYKA DS+PSSN SW MMK
Sbjct: 824 MMQPYSLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMK 868
Score = 79.0 bits (193), Expect(4) = 8e-79
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
+ +P L ++ I +SPLLY L S++NEL+ELQLE H R V + +FILK S++
Sbjct: 628 YSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGK 687
Query: 526 LIDSKSDSAINKVVQQIIF 470
L DSKS+SAINKVVQQI F
Sbjct: 688 LFDSKSESAINKVVQQIGF 706
Score = 73.6 bits (179), Expect(4) = 8e-79
Identities = 32/53 (60%), Positives = 44/53 (83%)
Frame = -1
Query: 863 FNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDF 705
F+R MPS++N+I T IFF KGP EVL+FF LQP+LME+++S+GFS GL+D+
Sbjct: 576 FDRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDY 628
Score = 58.9 bits (141), Expect(4) = 8e-79
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
+MF+ YF +A AQQLA++ LP PALL ++ WT LQ+LQT LP +FD
Sbjct: 505 MMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPASFD 558
>XP_010032299.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Eucalyptus
grandis] KCW51715.1 hypothetical protein EUGRSUZ_J01182
[Eucalyptus grandis]
Length = 1814
Score = 153 bits (387), Expect(4) = 1e-78
Identities = 88/164 (53%), Positives = 112/164 (68%), Gaps = 8/164 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPF-CENYPYEELRVVRSCLFDGLNPYQVMIH 297
FLG+Q+SD+ +FYS +L D++ S F KY F +YP E +++S GL+PY++M+H
Sbjct: 704 FLGVQISDKGKFYSTSLFDEMASLFRSKYFFEGADYPSGEYGLIKSSFICGLDPYEMMVH 763
Query: 296 S**RSDRSFIKR----VAEPETLFNNLMALLRDV-ICYAGTIRNVCSN*IIQFEYGTQT* 132
S R I R ++EP TLF NLMA+LRDV ICY GT+RNVCSN IIQFEYG++
Sbjct: 764 S--ICTREVIVRSTRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGSEVG 821
Query: 131 TMTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
+F A EPVGVLA T + NPAYKA DSSPSSN SW +MK
Sbjct: 822 GKPENLFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMK 865
Score = 87.8 bits (216), Expect(4) = 1e-78
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
F++P ++ I I +SPLLY+L +++NEL++LQLE H R + ++ FILKSSA+ +
Sbjct: 626 FYIPQSMIQDIQKNIQVISPLLYHLRTTHNELVQLQLENHLRLAKLPLSRFILKSSALGD 685
Query: 526 LIDSKSDSAINKVVQQIIF 470
L+DSKSDSAINK++QQI F
Sbjct: 686 LVDSKSDSAINKIIQQIGF 704
Score = 65.1 bits (157), Expect(4) = 1e-78
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
+MF+ YFF++ AQQLA++ +LP PALL+A P WT LQ+LQTALP F+
Sbjct: 503 MMFRKYFFDKLAAQQLAMFVSSDLPHPALLKAHQFCPTWTALQMLQTALPAGFN 556
Score = 58.9 bits (141), Expect(4) = 1e-78
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFF 702
L + ++R + ++++I T IFF K P EVL+FF LQP+LME L+++GFS LEDF+
Sbjct: 570 LDVDYSREFIVPMISEIVTSIFFEKSPVEVLKFFDALQPLLMENLFTEGFSVCLEDFY 627
>XP_012449583.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Gossypium raimondii] KJB67887.1 hypothetical protein
B456_010G216600 [Gossypium raimondii]
Length = 1966
Score = 155 bits (393), Expect(4) = 5e-78
Identities = 91/164 (55%), Positives = 111/164 (67%), Gaps = 8/164 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPF-CENYPYEELRVVRSCLFDGLNPYQVMIH 297
FLGMQLSD+ +FYSKTLV+D+ F YP +YP E +++SC F GL+PY+ ++H
Sbjct: 702 FLGMQLSDKGKFYSKTLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVH 761
Query: 296 S**RSDRSFIKR----VAEPETLFNNLMALLRD-VICYAGTIRNVCSN*IIQFEYGTQT* 132
S S R + R ++EP TLF NLMA+LRD VICY GT+RNV SN IIQF+YG
Sbjct: 762 S--ISTREVMVRSTRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLS-- 817
Query: 131 TMTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
T F A EPVGVLA T + NPAYKA DSSPSSN SW +MK
Sbjct: 818 ARTRPQFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMK 861
Score = 89.7 bits (221), Expect(4) = 5e-78
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
F V EV+++I I +SPLLY L S+YNEL+ELQ+E H R +A FILK+S++ N
Sbjct: 624 FSVSREVIENIQKDIQVISPLLYQLRSTYNELVELQMENHIRVAKEPIADFILKTSSLGN 683
Query: 526 LIDSKSDSAINKVVQQIIF 470
LIDS+SDSA+NKVVQQI F
Sbjct: 684 LIDSRSDSAVNKVVQQIGF 702
Score = 64.7 bits (156), Expect(4) = 5e-78
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
L + FN+ +M SV+N++ IF+ KGP EVL FF LQP+LME ++++GF+ LEDF S
Sbjct: 568 LKVDFNKDLMQSVINEVVASIFYEKGPKEVLNFFDSLQPLLMENIFAEGFTVCLEDFSVS 627
Score = 53.1 bits (126), Expect(4) = 5e-78
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
+M K + F +A AQQL+++ LP PA L+ + P WT Q+LQTA P D
Sbjct: 501 VMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHVAPCWTAFQILQTAFPACLD 554
>XP_008465860.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo]
Length = 1964
Score = 154 bits (390), Expect(4) = 5e-78
Identities = 89/165 (53%), Positives = 113/165 (68%), Gaps = 9/165 (5%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPFCE-NYPYEELRVVRSCLFDGLNPYQVMIH 297
FLG+QLSD+ RFYSK+L++D+ S F +Y + +YP E +V+ C F GL+PY+ M+H
Sbjct: 706 FLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVH 765
Query: 296 S**RSDRSFIKR----VAEPETLFNNLMALLRDV-ICYAGTIRNVCSN*IIQFEYGTQT* 132
S S R + R + EP TLF NLMA+LRDV ICY GT+RNVCSN IIQ EYG +
Sbjct: 766 S--ISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAG 823
Query: 131 TM-THTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
M +++F EPVGVLA T + PAYKA DS+PSSN SW MMK
Sbjct: 824 MMQPYSLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMK 868
Score = 79.0 bits (193), Expect(4) = 5e-78
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
+ +P L ++ I +SPLLY L S++NEL+ELQLE H R V + +FILK S++
Sbjct: 628 YSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGK 687
Query: 526 LIDSKSDSAINKVVQQIIF 470
L DSKS+SAINKVVQQI F
Sbjct: 688 LFDSKSESAINKVVQQIGF 706
Score = 72.4 bits (176), Expect(4) = 5e-78
Identities = 31/53 (58%), Positives = 44/53 (83%)
Frame = -1
Query: 863 FNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDF 705
F++ MPS++N+I T IFF KGP EVL+FF LQP+LME+++S+GFS GL+D+
Sbjct: 576 FDKDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDY 628
Score = 57.4 bits (137), Expect(4) = 5e-78
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
+MF+ YF +A AQQLA++ LP PALL ++ WT LQ+LQT LP FD
Sbjct: 505 MMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPACFD 558
>XP_012449584.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Gossypium raimondii]
Length = 1921
Score = 155 bits (393), Expect(4) = 5e-78
Identities = 91/164 (55%), Positives = 111/164 (67%), Gaps = 8/164 (4%)
Frame = -1
Query: 473 FLGMQLSDRERFYSKTLVDDINSNFLEKYPF-CENYPYEELRVVRSCLFDGLNPYQVMIH 297
FLGMQLSD+ +FYSKTLV+D+ F YP +YP E +++SC F GL+PY+ ++H
Sbjct: 702 FLGMQLSDKGKFYSKTLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVH 761
Query: 296 S**RSDRSFIKR----VAEPETLFNNLMALLRD-VICYAGTIRNVCSN*IIQFEYGTQT* 132
S S R + R ++EP TLF NLMA+LRD VICY GT+RNV SN IIQF+YG
Sbjct: 762 S--ISTREVMVRSTRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLS-- 817
Query: 131 TMTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWAMMK 6
T F A EPVGVLA T + NPAYKA DSSPSSN SW +MK
Sbjct: 818 ARTRPQFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMK 861
Score = 89.7 bits (221), Expect(4) = 5e-78
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = -2
Query: 706 FFVPNEVLDSIHT*IHNVSPLLYYLWSSYNELIELQLEKHTRHVTMSVASFILKSSAMDN 527
F V EV+++I I +SPLLY L S+YNEL+ELQ+E H R +A FILK+S++ N
Sbjct: 624 FSVSREVIENIQKDIQVISPLLYQLRSTYNELVELQMENHIRVAKEPIADFILKTSSLGN 683
Query: 526 LIDSKSDSAINKVVQQIIF 470
LIDS+SDSA+NKVVQQI F
Sbjct: 684 LIDSRSDSAVNKVVQQIGF 702
Score = 64.7 bits (156), Expect(4) = 5e-78
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
L + FN+ +M SV+N++ IF+ KGP EVL FF LQP+LME ++++GF+ LEDF S
Sbjct: 568 LKVDFNKDLMQSVINEVVASIFYEKGPKEVLNFFDSLQPLLMENIFAEGFTVCLEDFSVS 627
Score = 53.1 bits (126), Expect(4) = 5e-78
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
+M K + F +A AQQL+++ LP PA L+ + P WT Q+LQTA P D
Sbjct: 501 VMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHVAPCWTAFQILQTAFPACLD 554
>XP_017257953.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Daucus carota
subsp. sativus] KZM90293.1 hypothetical protein
DCAR_022342 [Daucus carota subsp. sativus]
Length = 2116
Score = 234 bits (598), Expect(2) = 3e-74
Identities = 143/303 (47%), Positives = 192/303 (63%), Gaps = 13/303 (4%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
L + +NR +M S++ND+ + IFFGKGP E LRFF +QP+LME LY++GFS GLEDF+
Sbjct: 574 LDVDYNRDLMQSIINDVVSSIFFGKGPIEALRFFDSVQPMLMENLYTEGFSVGLEDFYVP 633
Query: 695 E*GSR*YSHLNS*CFTFALLFVVVLQ*TNRVAIGEAYKACDNVSC*LHSKVICNG*FDRL 516
+ + + ++ + + + N + + + ++ + ++++ + L
Sbjct: 634 K---EIIQNCEARIQEYSSILYRMRESHNELIALQLERQIRSLRVPIANQILKSSAIGYL 690
Query: 515 *E*LRYQQGSSTNY------FLGMQLSDRERFYSKTLVDDINSNFLEKYPFCENYPYEEL 354
+ + S+ N FLG+Q+SDR +FYSKTLV DI S F KYP +YP EE
Sbjct: 691 ---IDSKSESAINKVVQQVGFLGLQISDRGKFYSKTLVADIASLFRTKYPSGASYPSEEY 747
Query: 353 RVVRSCLFDGLNPYQVMIHS**RSDRSFIKR----VAEPETLFNNLMALLRDVI-CYAGT 189
+VR CL GL+PYQ ++HS S R I R + EP TLF NLMA+LRDVI CY GT
Sbjct: 748 GLVRGCLIHGLDPYQSIVHS--ISSREVIVRSSRGLTEPGTLFKNLMAILRDVIICYDGT 805
Query: 188 IRNVCSN*IIQFEYGTQT*TMTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWA 15
+RNVCSN IIQFEYG QT T++ +IFAA EPVGVLA T + NPAYKA DSSPSSN SWA
Sbjct: 806 VRNVCSNSIIQFEYGMQTGTLSQSIFAAGEPVGVLAATAMSNPAYKAVLDSSPSSNNSWA 865
Query: 14 MMK 6
MMK
Sbjct: 866 MMK 868
Score = 73.9 bits (180), Expect(2) = 3e-74
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
LMFK YFF RA QQLA++ G LP PALLRAQ+S LWT+LQLLQ +LP FD
Sbjct: 507 LMFKKYFFGRAATQQLAMFVSGVLPIPALLRAQSSDSLWTVLQLLQISLPPKFD 560
>XP_017225052.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Daucus
carota subsp. sativus]
Length = 1989
Score = 234 bits (598), Expect(2) = 3e-74
Identities = 143/303 (47%), Positives = 192/303 (63%), Gaps = 13/303 (4%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
L + +NR +M S++ND+ + IFFGKGP E LRFF +QP+LME LY++GFS GLEDF+
Sbjct: 447 LDVDYNRDLMQSIINDVVSSIFFGKGPIEALRFFDSVQPMLMENLYTEGFSVGLEDFYVP 506
Query: 695 E*GSR*YSHLNS*CFTFALLFVVVLQ*TNRVAIGEAYKACDNVSC*LHSKVICNG*FDRL 516
+ + + ++ + + + N + + + ++ + ++++ + L
Sbjct: 507 K---EIIQNCEARIQEYSSILYRMRESHNELIALQLERQIRSLRVPIANQILKSSAIGYL 563
Query: 515 *E*LRYQQGSSTNY------FLGMQLSDRERFYSKTLVDDINSNFLEKYPFCENYPYEEL 354
+ + S+ N FLG+Q+SDR +FYSKTLV DI S F KYP +YP EE
Sbjct: 564 ---IDSKSESAINKVVQQVGFLGLQISDRGKFYSKTLVADIASLFRTKYPSGASYPSEEY 620
Query: 353 RVVRSCLFDGLNPYQVMIHS**RSDRSFIKR----VAEPETLFNNLMALLRDVI-CYAGT 189
+VR CL GL+PYQ ++HS S R I R + EP TLF NLMA+LRDVI CY GT
Sbjct: 621 GLVRGCLIHGLDPYQSIVHS--ISSREVIVRSSRGLTEPGTLFKNLMAILRDVIICYDGT 678
Query: 188 IRNVCSN*IIQFEYGTQT*TMTHTIFAAEEPVGVLAVTPIPNPAYKA--DSSPSSNPSWA 15
+RNVCSN IIQFEYG QT T++ +IFAA EPVGVLA T + NPAYKA DSSPSSN SWA
Sbjct: 679 VRNVCSNSIIQFEYGMQTGTLSQSIFAAGEPVGVLAATAMSNPAYKAVLDSSPSSNNSWA 738
Query: 14 MMK 6
MMK
Sbjct: 739 MMK 741
Score = 73.9 bits (180), Expect(2) = 3e-74
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
LMFK YFF RA QQLA++ G LP PALLRAQ+S LWT+LQLLQ +LP FD
Sbjct: 380 LMFKKYFFGRAATQQLAMFVSGVLPIPALLRAQSSDSLWTVLQLLQISLPPKFD 433
>XP_006420718.1 hypothetical protein CICLE_v10004129mg [Citrus clementina] ESR33958.1
hypothetical protein CICLE_v10004129mg [Citrus
clementina]
Length = 1867
Score = 211 bits (537), Expect(3) = 3e-65
Identities = 143/313 (45%), Positives = 182/313 (58%), Gaps = 27/313 (8%)
Frame = -1
Query: 863 FNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCSE*GS 684
F+R +PSV+N+I T IFF KGP EVL FF LQP+LME L++DGFS LEDF S+ +
Sbjct: 574 FDRDTIPSVINEIVTSIFFEKGPEEVLEFFDSLQPLLMENLFADGFSVSLEDFSLSK--A 631
Query: 683 R*YSHLNS*CFTFALLF--------VVVLQ*TNRVAIGEAYKA------------CDNVS 564
++ ++LL+ +V LQ N + + A D+ S
Sbjct: 632 ALWNIQKEIQALYSLLYHRMSTQNELVDLQIENHIRHVKMLVAKFILKSSTLGYLIDSKS 691
Query: 563 C*LHSKVICNG*FDRL*E*LRYQQGSSTNYFLGMQLSDRERFYSKTLVDDINSNFLEKYP 384
SKV+ QQ FLG+QLSDR +FYSKTLV+DI S+F YP
Sbjct: 692 DSAVSKVV--------------QQAG----FLGLQLSDRGKFYSKTLVEDIASHFERIYP 733
Query: 383 FCENYPYEELRVVRSCLFDGLNPYQVMIHS**RSDRSFIKR----VAEPETLFNNLMALL 216
NYP + +++ C F GL+PY+ M HS S R I R ++EP TLF NLMA+L
Sbjct: 734 MDLNYPTAKYGLIKGCFFHGLDPYEEMTHS--ISTREVIVRSSRGLSEPGTLFKNLMAVL 791
Query: 215 RD-VICYAGTIRNVCSN*IIQFEYGTQT*TMTHTIFAAEEPVGVLAVTPIPNPAYKA--D 45
RD VICY GT+RNVCSN IIQF+Y +H++F A EPVGVLA T + NPAYKA D
Sbjct: 792 RDVVICYDGTVRNVCSNSIIQFDYAVNA-RKSHSLFPAGEPVGVLAATAMSNPAYKAVLD 850
Query: 44 SSPSSNPSWAMMK 6
SSPSSN SW +MK
Sbjct: 851 SSPSSNNSWELMK 863
Score = 65.9 bits (159), Expect(3) = 3e-65
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
+MFK YF ++A+AQQLA++ LP PAL +A SGP WT LQ+LQ+ LP FD
Sbjct: 503 VMFKKYFLDKAFAQQLAMFALSPLPRPALSKAHCSGPRWTALQILQSVLPPGFD 556
Score = 22.7 bits (47), Expect(3) = 3e-65
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2
Query: 1114 KLFSVVGKQLFSSHNG 1067
+LFSV KQL SSHNG
Sbjct: 473 ELFSVE-KQLLSSHNG 487
>GAV75269.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
domain-containing protein/RNA_pol_Rpb1_1
domain-containing protein/RNA_pol_Rpb1_5
domain-containing protein/DUF3223 domain-containing
protein [Cephalotus follicularis]
Length = 1964
Score = 213 bits (541), Expect(2) = 2e-64
Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 21/311 (6%)
Frame = -1
Query: 875 LILTFNRVIMPSVLNDIFTYIFFGKGPNEVLRFFAFLQPILMEYLYSDGFSAGLEDFFCS 696
L+ FNR ++ SV+N+I T IFF KGP VLRFF +LQP+LME L+ +GFS LEDF+ S
Sbjct: 571 LVADFNREVVQSVMNEIVTSIFFEKGPAAVLRFFNWLQPLLMESLFGEGFSVSLEDFYIS 630
Query: 695 E*GSR*YSHLNS*CFTFALLFV-------VVLQ*TNRVAIGEAYKACDNVSC*LHSKVIC 537
+ S Y H + + L + V LQ N + + + D V+ +
Sbjct: 631 K-ASLEYIHQDINVISPLLGRLRSTYNERVELQLENHIRLTK-----DPVAHFILKSSAL 684
Query: 536 NG*FDRL*E*LRYQQGSSTNY------FLGMQLSDRERFYSKTLVDDINSNFLEKYP-FC 378
D + SS N FLG+QLSD+ +FYSKTL +D+ S+F KYP
Sbjct: 685 GDLIDS-------KSDSSVNKVVQQIGFLGLQLSDKGKFYSKTLFEDVGSHFESKYPSHI 737
Query: 377 ENYPYEELRVVRSCLFDGLNPYQVMIHS**RSDRSFIKR----VAEPETLFNNLMALLRD 210
+YP + +V+ C F GL+PY+ MIHS S R I R ++EP TLF NLMA+LRD
Sbjct: 738 VDYPSVKYGLVKGCFFHGLDPYEEMIHS--ISTREVIVRSSRGLSEPGTLFKNLMAILRD 795
Query: 209 V-ICYAGTIRNVCSN*IIQFEYGTQT*TMTHTIFAAEEPVGVLAVTPIPNPAYKA--DSS 39
V ICY GT+RNV SN IIQFEYG T T + ++F EPVGVLA T + NPAYKA DS+
Sbjct: 796 VVICYDGTVRNVSSNSIIQFEYGVNTGTRSQSLFPPGEPVGVLAATAMSNPAYKAVLDST 855
Query: 38 PSSNPSWAMMK 6
PSSN SW MK
Sbjct: 856 PSSNSSWEQMK 866
Score = 63.2 bits (152), Expect(2) = 2e-64
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = -3
Query: 1026 LMFKNYFFNRAYAQQLALYFCGNLPSPALLRAQNSGPLWTILQLLQTALPLNFD 865
LMFK RA A+QLA++ +LP PALL+A + GP WT LQLLQT +P FD
Sbjct: 504 LMFKTNLLKRAAAEQLAMFVSLSLPRPALLKAHSCGPCWTALQLLQTVMPSEFD 557