BLASTX nr result

ID: Panax25_contig00035161 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00035161
         (486 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017255454.1 PREDICTED: uncharacterized protein LOC108225147 [...    59   3e-07
XP_017253750.1 PREDICTED: uncharacterized protein LOC108223829 [...    56   3e-06
KZM91636.1 hypothetical protein DCAR_020999 [Daucus carota subsp...    56   3e-06
XP_018850181.1 PREDICTED: uncharacterized protein LOC109012813 [...    55   6e-06

>XP_017255454.1 PREDICTED: uncharacterized protein LOC108225147 [Daucus carota
           subsp. sativus]
          Length = 328

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
 Frame = -3

Query: 469 TKTKMSRCNSDPCPSSNYNS----QEEMFVRNDGKCSSC----PSTKKHPTKLARAPSLP 314
           +K KMSRCNSDPCPS+N+N+    QE+  +      S+      +TK    KL RAPSLP
Sbjct: 36  SKPKMSRCNSDPCPSTNFNARPTDQEQSLISIANASSTALIENENTKVVAPKLVRAPSLP 95

Query: 313 SFMA-RAVEVNQE 278
           SFMA + V+V Q+
Sbjct: 96  SFMAVKTVQVAQQ 108



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/46 (71%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = -1

Query: 138 EDQESEFTLGRLIRQASLNSSD-ILPPRHPSKSSTIPTRKHRPRKK 4
           EDQESEF LGRLIRQASL SSD  LPPR   KSS+I     RPRKK
Sbjct: 153 EDQESEFRLGRLIRQASLKSSDTFLPPRQTPKSSSI---ARRPRKK 195


>XP_017253750.1 PREDICTED: uncharacterized protein LOC108223829 [Daucus carota
           subsp. sativus] KZM93874.1 hypothetical protein
           DCAR_017119 [Daucus carota subsp. sativus]
          Length = 275

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/44 (65%), Positives = 34/44 (77%)
 Frame = -1

Query: 138 EDQESEFTLGRLIRQASLNSSDILPPRHPSKSSTIPTRKHRPRK 7
           ED+ESEF LGRLIRQAS+ SS +LPPRH SKS +    K+ PRK
Sbjct: 132 EDEESEFMLGRLIRQASVKSSHVLPPRHDSKSLS----KNSPRK 171


>KZM91636.1 hypothetical protein DCAR_020999 [Daucus carota subsp. sativus]
          Length = 289

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/46 (71%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = -1

Query: 138 EDQESEFTLGRLIRQASLNSSD-ILPPRHPSKSSTIPTRKHRPRKK 4
           EDQESEF LGRLIRQASL SSD  LPPR   KSS+I     RPRKK
Sbjct: 114 EDQESEFRLGRLIRQASLKSSDTFLPPRQTPKSSSI---ARRPRKK 156



 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
 Frame = -3

Query: 457 MSRCNSDPCPSSNYNS----QEEMFVRNDGKCSSC----PSTKKHPTKLARAPSLPSFMA 302
           MSRCNSDPCPS+N+N+    QE+  +      S+      +TK    KL RAPSLPSFMA
Sbjct: 1   MSRCNSDPCPSTNFNARPTDQEQSLISIANASSTALIENENTKVVAPKLVRAPSLPSFMA 60

Query: 301 -RAVEVNQE 278
            + V+V Q+
Sbjct: 61  VKTVQVAQQ 69


>XP_018850181.1 PREDICTED: uncharacterized protein LOC109012813 [Juglans regia]
          Length = 331

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 35/74 (47%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 481 NSGGTKTKMSRCNSDPCPSSNYNSQEEMFVRNDGKCSSCPSTKKH-----PTKLARAPSL 317
           NS   KT+MSRCNSDPCPSS  NS  EM V+N    S      K      P  L R PSL
Sbjct: 32  NSLNRKTRMSRCNSDPCPSS--NSGLEMSVKN---LSGATGKLKEDDGFVPPCLVRTPSL 86

Query: 316 PSFMARAVEVNQEK 275
           P ++ R VE  + K
Sbjct: 87  PPYLGREVETRENK 100


Top