BLASTX nr result

ID: Panax25_contig00035140 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00035140
         (452 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006340527.1 PREDICTED: pentatricopeptide repeat-containing pr...    39   7e-06

>XP_006340527.1 PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Solanum tuberosum]
          Length = 595

 Score = 38.9 bits (89), Expect(2) = 7e-06
 Identities = 16/20 (80%), Positives = 20/20 (100%)
 Frame = -1

Query: 188 HVLKLGFESYLYVCNALIHM 129
           +VLKLG++SYLYVCNALI+M
Sbjct: 138 NVLKLGYQSYLYVCNALIYM 157



 Score = 38.1 bits (87), Expect(2) = 7e-06
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 7/44 (15%)
 Frame = -2

Query: 115 LVY*FASCC-------MFDKISDRNLVFWNSLIYYRYRQCNTFH 5
           L+Y + SC        +FD++S+R+LV WNSLI   Y QCN +H
Sbjct: 154 LIYMYGSCGDLVGAGKVFDQMSERDLVSWNSLI-CGYSQCNRYH 196


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