BLASTX nr result
ID: Panax25_contig00035012
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00035012
(1396 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAU45180.1 Retrovirus-related Pol polyprotein from transposon TN... 482 e-166
JAU39535.1 Retrovirus-related Pol polyprotein from transposon TN... 452 e-153
CAB75932.1 putative protein [Arabidopsis thaliana] 381 e-128
KYP43087.1 Retrovirus-related Pol polyprotein from transposon TN... 387 e-127
CBI37296.3 unnamed protein product, partial [Vitis vinifera] 380 e-127
GAU26746.1 hypothetical protein TSUD_317440 [Trifolium subterran... 372 e-126
JAU61547.1 Retrovirus-related Pol polyprotein from transposon TN... 373 e-125
KYP44457.1 Retrovirus-related Pol polyprotein from transposon TN... 379 e-122
GAU23361.1 hypothetical protein TSUD_334080 [Trifolium subterran... 374 e-121
JAU33683.1 Retrovirus-related Pol polyprotein from transposon TN... 351 e-121
GAU16533.1 hypothetical protein TSUD_167640 [Trifolium subterran... 378 e-121
KYP63625.1 Retrovirus-related Pol polyprotein from transposon TN... 366 e-120
GAU15733.1 hypothetical protein TSUD_235460 [Trifolium subterran... 372 e-120
GAU43961.1 hypothetical protein TSUD_283880 [Trifolium subterran... 369 e-119
GAU42405.1 hypothetical protein TSUD_324600 [Trifolium subterran... 375 e-119
GAU32260.1 hypothetical protein TSUD_53880 [Trifolium subterraneum] 380 e-119
KOM33859.1 hypothetical protein LR48_Vigan02g000900 [Vigna angul... 356 e-119
GAU31303.1 hypothetical protein TSUD_315120 [Trifolium subterran... 359 e-118
KYP74877.1 Retrovirus-related Pol polyprotein from transposon TN... 353 e-117
GAU44758.1 hypothetical protein TSUD_246510 [Trifolium subterran... 369 e-117
>JAU45180.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Noccaea caerulescens]
Length = 944
Score = 482 bits (1240), Expect(3) = e-166
Identities = 228/325 (70%), Positives = 272/325 (83%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
WF EL+E+FKH VRLG++S++ VE KG++RFE EGI Q ++VYY+PNL+NNLLSIGQLQ
Sbjct: 139 WFTELNEDFKHLVRLGNNSRLVVEGKGNIRFEAEGIIQVITDVYYIPNLSNNLLSIGQLQ 198
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
EK L +I+ GTCRI+H RGLI+ T+MT N MFL+YAK KP+ CL++EEED LW
Sbjct: 199 EKKLKFVIENGTCRIFHSLRGLIMETKMTLNCMFLIYAKE-KPVSEKCLRVEEEDLGSLW 257
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLE 856
HRR HLNN SIQIMQ+K++VKGLP +K +KVC +CN+GKQQR++F KKSKWRA+ KLE
Sbjct: 258 HRRLGHLNNTSIQIMQKKELVKGLPDMKIEEKVCTVCNIGKQQREKFPKKSKWRATEKLE 317
Query: 855 LIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKT 676
LIH DLCGPITPIS SGKRYL+VL DDFSRKTWIYFL +KSE FETFK FKN EKE KT
Sbjct: 318 LIHTDLCGPITPISQSGKRYLMVLDDDFSRKTWIYFLTEKSEAFETFKVFKNLVEKEVKT 377
Query: 675 AICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSE 496
I G R DRGGEFTS FN+FC+D+GI+RQLTA YTPQQNGVAER+N TIMNMV+CLLSE
Sbjct: 378 MIRGLRTDRGGEFTSENFNQFCRDHGIKRQLTATYTPQQNGVAERRNRTIMNMVRCLLSE 437
Query: 495 KEMPKSLWPEAARWTAHVLNRSYTK 421
KE+P+S WP+AARWTA++LNRS TK
Sbjct: 438 KELPRSFWPDAARWTAYILNRSVTK 462
Score = 111 bits (277), Expect(3) = e-166
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = -3
Query: 422 KAVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAY 243
KA+KD VPEER TG+KP V YFRVFGSI HVH+P QKR KLDDRSHKCILLGVS+ESKAY
Sbjct: 462 KAIKDKVPEERWTGMKPKVSYFRVFGSIGHVHIPVQKRIKLDDRSHKCILLGVSEESKAY 521
Query: 242 RLYE 231
RLY+
Sbjct: 522 RLYD 525
Score = 43.9 bits (102), Expect(3) = e-166
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -1
Query: 235 MSRDVIFEEGGKWDWNLGTTEAEQDVLAWGD 143
+SRDVIFEE KWDW L ++ EQ LAWGD
Sbjct: 533 ISRDVIFEEDAKWDWTL--SKPEQKELAWGD 561
>JAU39535.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Noccaea
caerulescens]
Length = 426
Score = 452 bits (1162), Expect = e-153
Identities = 207/328 (63%), Positives = 269/328 (82%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
WF ELD+NF+H+V+LG++++M V KG+++FEVEG+ Q S+V++VP LTNNLLS+GQLQ
Sbjct: 31 WFTELDQNFRHAVKLGNNARMVVVGKGNIKFEVEGLIQVVSDVFFVPELTNNLLSVGQLQ 90
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
EK +V+L+ +G C+IYH Q+GLIINT++TANRMF V A N+ P CLK+EEE+ LW
Sbjct: 91 EKGVVVLMDKGACKIYHPQKGLIINTKITANRMFTVSA-NLISGPIRCLKVEEEEITSLW 149
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLE 856
H+RY HL+N S++ M KQMVKGLP++KE KVC++CN+ KQ R+ KKS+WR S KLE
Sbjct: 150 HQRYGHLSNTSLKTMHDKQMVKGLPQMKEAVKVCEVCNIEKQHREIIPKKSQWRESEKLE 209
Query: 855 LIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKT 676
LIH DLCGP++PIS GKRY+ +L+DDFSRK+W+YFL++K+E F+ FKTFK+ EKEA T
Sbjct: 210 LIHADLCGPVSPISQGGKRYIFLLVDDFSRKSWMYFLSEKNEAFDVFKTFKSLVEKEAGT 269
Query: 675 AICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSE 496
+IC R DRGGEFTS+ FN+FC+++GI+RQLTAAYTPQQNGVAER+N TIMNMV+CLL+E
Sbjct: 270 SICCLRTDRGGEFTSSMFNQFCEEHGIKRQLTAAYTPQQNGVAERRNRTIMNMVRCLLTE 329
Query: 495 KEMPKSLWPEAARWTAHVLNRSYTKGSQ 412
K MPK WPEAA+WT H+LNRS T Q
Sbjct: 330 KSMPKRFWPEAAKWTCHILNRSMTSAVQ 357
Score = 100 bits (248), Expect = 3e-19
Identities = 46/63 (73%), Positives = 55/63 (87%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
AV+D VPEE +GVKP++ YFRVFG I HVHVPE +R KLD+RSHKC+LLGVS+ESKAYR
Sbjct: 355 AVQDKVPEEVWSGVKPSIGYFRVFGCIGHVHVPEPRRIKLDNRSHKCVLLGVSEESKAYR 414
Query: 239 LYE 231
LY+
Sbjct: 415 LYD 417
>CAB75932.1 putative protein [Arabidopsis thaliana]
Length = 1339
Score = 381 bits (979), Expect(3) = e-128
Identities = 180/332 (54%), Positives = 240/332 (72%), Gaps = 3/332 (0%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
WF EL+E F +V+LG+ ++M+V KGSV+ +V G+TQ VYYVP L NNLLS+GQLQ
Sbjct: 316 WFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVIPEVYYVPELRNNLLSLGQLQ 375
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGN-CLKMEE--EDSE 1045
E+ L ILI++GTC++YH +G I+ T M+ NRMF + A KP + CL+ EE +
Sbjct: 376 ERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLAS--KPQKNSLCLQTEEVMDKEN 433
Query: 1044 ILWHRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASN 865
LWH R+ HLN + ++++ K+MV GLP LK ++C +C GKQ R+ +KK+ W++S
Sbjct: 434 HLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICAICLTGKQHRESMSKKTSWKSST 493
Query: 864 KLELIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKE 685
+L+L+H D+CGPITPISHSGKRY+L IDDF+RKTW+YFL +KSE F TFK FK EKE
Sbjct: 494 QLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKE 553
Query: 684 AKTAICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCL 505
+ R DRGGEFTSNEF +FC+ +GI RQLTAA+TPQQNGVAERKN TIMN V+ +
Sbjct: 554 IGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSM 613
Query: 504 LSEKEMPKSLWPEAARWTAHVLNRSYTKGSQG 409
LSE+++PK W EA +W+ H+ NRS T +G
Sbjct: 614 LSERQVPKMFWSEATKWSVHIQNRSPTAAVEG 645
Score = 89.4 bits (220), Expect(3) = e-128
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
AV+ M PEE +G KP V YFRVFG I +VH+P+QKR+KLDD+S KC+ LGVS+ESKA+R
Sbjct: 642 AVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWR 701
Query: 239 LYE 231
LY+
Sbjct: 702 LYD 704
Score = 39.7 bits (91), Expect(3) = e-128
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDWNLGTTEAEQDVLAWGDADD 134
+ +S+DV+F+E WDW+ EA++ L GD DD
Sbjct: 710 IVISKDVVFDEDKSWDWDQADVEAKEVTLECGDEDD 745
>KYP43087.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 551
Score = 387 bits (993), Expect(3) = e-127
Identities = 184/325 (56%), Positives = 237/325 (72%), Gaps = 1/325 (0%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
WF E+D+ FK V+LG++++M V KGSVR ++G+T ++V+ VP L NNLLSIGQLQ
Sbjct: 7 WFKEVDDTFKQHVKLGNNTRMEVTGKGSVRLNIKGVTHIITDVFLVPELKNNLLSIGQLQ 66
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
EK L ++ + GTC++YH +GLI+ T MT NRMF+++A++ +C + +D LW
Sbjct: 67 EKGLTVMFQSGTCKLYHPDKGLILETNMTTNRMFILFAQSATK-KDSCFHISTQDLSSLW 125
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPK-LKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKL 859
HRRY HL++K ++I+Q K MV+GLP L +KVC+ C GKQ R KKS+WRA KL
Sbjct: 126 HRRYAHLSHKGLRILQSKGMVRGLPSSLSTTEKVCEDCMKGKQHRDPIPKKSQWRAKQKL 185
Query: 858 ELIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAK 679
ELIH D+CGPI P S+S KRY L IDD++RK WIYFL +KSE F F+ FKN EKE+
Sbjct: 186 ELIHADICGPIIPSSNSQKRYFLCFIDDYTRKAWIYFLTEKSEAFHYFQCFKNLVEKESG 245
Query: 678 TAICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLS 499
I R DRGGEFTS+EFN+FC+ GI+RQLT AYTPQQNGVAERKN TIMN+V+ LLS
Sbjct: 246 LMIKCLRTDRGGEFTSSEFNEFCQKTGIKRQLTTAYTPQQNGVAERKNRTIMNLVRTLLS 305
Query: 498 EKEMPKSLWPEAARWTAHVLNRSYT 424
EK++PKS WPEA W A+VLNRS T
Sbjct: 306 EKKLPKSFWPEAVNWVAYVLNRSPT 330
Score = 85.1 bits (209), Expect(3) = e-127
Identities = 38/61 (62%), Positives = 50/61 (81%)
Frame = -3
Query: 416 VKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYRL 237
VK+ PEE +GVKP+V +FRVFG + HVHVP+ RTKL+++S KC+LLG+S+ESK YRL
Sbjct: 333 VKNQTPEEAWSGVKPSVEHFRVFGCVTHVHVPDAGRTKLENKSCKCVLLGMSEESKGYRL 392
Query: 236 Y 234
Y
Sbjct: 393 Y 393
Score = 37.0 bits (84), Expect(3) = e-127
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDWNLGTTEAEQDVLAWGDADDIA 128
+ +SRDV+FEE +W+WN+ E + L +GD + A
Sbjct: 400 IVISRDVVFEEDTQWNWNVSHREEQFADLEYGDTKNTA 437
>CBI37296.3 unnamed protein product, partial [Vitis vinifera]
Length = 3048
Score = 380 bits (977), Expect(3) = e-127
Identities = 182/324 (56%), Positives = 237/324 (73%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
+F + D F+ SV+LG+++ M+V KG+VR +V +TQ + V+YVP L NNLLSIGQLQ
Sbjct: 336 YFSDFDGTFRDSVKLGNNTSMSVLGKGNVRLKVNEMTQIITGVFYVPELKNNLLSIGQLQ 395
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
EK L IL + G C+++H Q+GLI++T+M++NRMF++YA + +P+ C ED LW
Sbjct: 396 EKGLTILFQHGKCKVFHSQKGLIMDTKMSSNRMFMLYALS-QPISSTCFNTVTEDILQLW 454
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLE 856
H RY HL+ + ++ +QQ++MV GLP+ + K+CK C VGKQ R KKS WRA+ L+
Sbjct: 455 HCRYGHLSFQGLKTLQQRKMVNGLPQFQPPSKLCKDCLVGKQHRSSIPKKSNWRAAEILQ 514
Query: 855 LIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKT 676
L+H D+CGPI PIS+S KRYLL DDFSRKTW+YFL +KSE F FK+FK + EKE +
Sbjct: 515 LVHADICGPINPISNSKKRYLLTFTDDFSRKTWVYFLVEKSEAFAVFKSFKTYVEKETSS 574
Query: 675 AICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSE 496
+ R DRGGEFTS EF FC +GIRRQLTAAYTPQQNGVAERKN TIMNMV+ +LS
Sbjct: 575 FLRCLRTDRGGEFTSQEFAIFCDVHGIRRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSA 634
Query: 495 KEMPKSLWPEAARWTAHVLNRSYT 424
K++PK+ WPEA WT HVLNRS T
Sbjct: 635 KKLPKTFWPEAVNWTVHVLNRSPT 658
Score = 90.1 bits (222), Expect(3) = e-127
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
AV++ PEE +KP+V YFRVFG ++HVHVP+ KRTKLDD+S C+LLGVS+ESKAYR
Sbjct: 660 AVQNKTPEEAWGKLKPSVDYFRVFGCLSHVHVPDSKRTKLDDKSFSCVLLGVSEESKAYR 719
Query: 239 LYE 231
LY+
Sbjct: 720 LYD 722
Score = 37.0 bits (84), Expect(3) = e-127
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDWNLGTTEAEQDVLAWGD 143
+ +SRDV+FEE WDW+ EA L WGD
Sbjct: 728 IIISRDVVFEEDKNWDWDKKYEEAIVCDLEWGD 760
>GAU26746.1 hypothetical protein TSUD_317440 [Trifolium subterraneum]
Length = 1608
Score = 372 bits (956), Expect(3) = e-126
Identities = 179/326 (54%), Positives = 225/326 (69%), Gaps = 2/326 (0%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
WF E++E F +V+LG+ + MAV KGS+R ++ G+TQ S+VY+VP L NNLLS+GQLQ
Sbjct: 315 WFSEMEEGFCRTVKLGNDTTMAVVAKGSIRVQINGVTQVISDVYFVPELKNNLLSLGQLQ 374
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKME--EEDSEI 1042
EK L ILI+ TC+++H +GLI++T M NRMF + CL+ E E
Sbjct: 375 EKGLAILIQNNTCKVFHPDKGLIMHTSMKGNRMFYLTVSAAPNKHSMCLQAEMMSEKETQ 434
Query: 1041 LWHRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNK 862
LWH R+ HLN K + + K+MV GLP LK K+C C +GKQ R+ KKS WRAS K
Sbjct: 435 LWHSRFGHLNYKGLNTLSNKKMVIGLPSLKSPKKICTTCLIGKQHRESIPKKSSWRASKK 494
Query: 861 LELIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEA 682
L+L+H D+CGPITP S+S KRY+L IDDF+RK WIYFL +KSE F FK FK EKE
Sbjct: 495 LQLVHADICGPITPSSNSNKRYILSFIDDFTRKAWIYFLHEKSEAFGRFKNFKACVEKEV 554
Query: 681 KTAICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLL 502
I R DRGGEF SNEF +FCKD GI RQLTA+YTPQQNGVAERKN TIMN V+ +L
Sbjct: 555 GAFITCLRTDRGGEFISNEFEEFCKDQGICRQLTASYTPQQNGVAERKNRTIMNAVRAVL 614
Query: 501 SEKEMPKSLWPEAARWTAHVLNRSYT 424
+E+++P+ WPEA +W HV NRS T
Sbjct: 615 NERQVPRVFWPEAVKWCVHVQNRSPT 640
Score = 93.2 bits (230), Expect(3) = e-126
Identities = 40/63 (63%), Positives = 53/63 (84%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
AV + PEE TGV+P+V YFR+FG +AH HVP+QKR+KLDD+S +C+ LGVSDESKAY+
Sbjct: 642 AVDHITPEEAWTGVRPSVDYFRIFGCVAHAHVPDQKRSKLDDKSKRCVFLGVSDESKAYK 701
Query: 239 LYE 231
L++
Sbjct: 702 LFD 704
Score = 38.1 bits (87), Expect(3) = e-126
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDWNLGTTEAEQDVLAWGDADD 134
V ++RDV+FEE WDW E + DVL W + ++
Sbjct: 710 VIVNRDVVFEEDKSWDWGRTEEECKVDVLDWEENEE 745
>JAU61547.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Noccaea caerulescens]
Length = 249
Score = 373 bits (958), Expect = e-125
Identities = 178/250 (71%), Positives = 207/250 (82%)
Frame = -2
Query: 1293 GITQTASNVYYVPNLTNNLLSIGQLQEKHLVILIKEGTCRIYHQQRGLIINTQMTANRMF 1114
GI Q ++VYY+PNL+NNLLSIGQLQEK L +I+ GTCRI+H RGLI+ T+MT NRMF
Sbjct: 1 GIIQVITDVYYIPNLSNNLLSIGQLQEKKLKFVIENGTCRIFHSLRGLIMETKMTLNRMF 60
Query: 1113 LVYAKNMKPLPGNCLKMEEEDSEILWHRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVC 934
L+YAK KP+ CLK+EEED LWHRR HLNN SIQIMQ+ ++VKGLP +K +KVC
Sbjct: 61 LIYAKE-KPVSEKCLKVEEEDLGSLWHRRLGHLNNTSIQIMQKNELVKGLPDMKIEEKVC 119
Query: 933 KMCNVGKQQRQEFTKKSKWRASNKLELIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWI 754
+CN+GKQQR++F KKSKWRA+ KLELIH DLCGPITPIS SGKRYL+VL+DDFSRKTWI
Sbjct: 120 TVCNIGKQQREKFPKKSKWRATEKLELIHTDLCGPITPISQSGKRYLMVLVDDFSRKTWI 179
Query: 753 YFLADKSEVFETFKTFKNFAEKEAKTAICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAA 574
YFL +KSE FETFK FKN EKE KT I G R DRGGEFTS FN+FC+D+GI+RQLTAA
Sbjct: 180 YFLTEKSEAFETFKVFKNLVEKEVKTMIRGLRTDRGGEFTSENFNQFCRDHGIKRQLTAA 239
Query: 573 YTPQQNGVAE 544
YTPQQNGVAE
Sbjct: 240 YTPQQNGVAE 249
>KYP44457.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 690
Score = 379 bits (974), Expect = e-122
Identities = 183/325 (56%), Positives = 232/325 (71%), Gaps = 1/325 (0%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
WF E+D+ FK V+LG++++M V KGSVR ++G+T ++V+ VP L NNLLSIGQLQ
Sbjct: 315 WFKEVDDTFKQHVKLGNNTRMEVTGKGSVRLNIKGVTHVITDVFLVPELKNNLLSIGQLQ 374
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
EK L ++ + GTC++YH +GLI+ T MT N MF+++A++ +C + +D LW
Sbjct: 375 EKGLTVMFQSGTCKLYHPDKGLILETNMTTNIMFILFAQSATK-KDSCFHISTQDLSSLW 433
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPK-LKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKL 859
H RY HL++K ++I+Q K MV+GLP L + VC+ C GKQ R KKS+WRA KL
Sbjct: 434 HHRYAHLSHKGLRILQSKGMVRGLPSSLSTTENVCEDCTKGKQHRDPIPKKSQWRAKQKL 493
Query: 858 ELIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAK 679
ELIH D+CGPITP S+S KRY L IDD+SRKTWIYFL KSE F F+ FKN EKE+
Sbjct: 494 ELIHADICGPITPSSNSQKRYFLCFIDDYSRKTWIYFLTKKSEAFHYFQCFKNLVEKESG 553
Query: 678 TAICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLS 499
I DRGGEFTS EFN+FC+ GI+RQLT AYTPQQNGVAERKN TIMN+V LLS
Sbjct: 554 LMIKCLITDRGGEFTSLEFNEFCQKTGIKRQLTIAYTPQQNGVAERKNRTIMNLVTTLLS 613
Query: 498 EKEMPKSLWPEAARWTAHVLNRSYT 424
EK++PKS WPEA W A+VLNRS T
Sbjct: 614 EKKLPKSFWPEAVNWVAYVLNRSPT 638
Score = 61.2 bits (147), Expect = 2e-06
Identities = 27/46 (58%), Positives = 37/46 (80%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHK 282
AVK+ PEE +GVKP+V +FRVFG + HVHVP+ +RTKL+++S K
Sbjct: 640 AVKNQTPEEAWSGVKPSVEHFRVFGCVTHVHVPDARRTKLENKSCK 685
>GAU23361.1 hypothetical protein TSUD_334080 [Trifolium subterraneum]
Length = 1322
Score = 374 bits (959), Expect(3) = e-121
Identities = 172/324 (53%), Positives = 233/324 (71%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
W + D+N + SV+LGD S+M + KG+++ + GITQ S+VYY+P L NNLLSIGQLQ
Sbjct: 307 WLFDFDDNIRESVKLGDDSRMQILGKGNLKLCIGGITQVISDVYYIPGLKNNLLSIGQLQ 366
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
+K L I+ K+ C++YH QRGLI+ T+M+ANRM+++YA + P+ CLK + D+ LW
Sbjct: 367 QKDLTIVFKQDFCKVYHPQRGLIMATKMSANRMYIIYAPVIIPM---CLKTVKMDNNELW 423
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLE 856
H RY HL+ K + + +K MV+GLP+L+E + C C GKQ R+ K S WRAS KLE
Sbjct: 424 HCRYGHLSFKGLNTLVKKDMVRGLPQLQETTENCTNCMTGKQHREAIPKSSNWRASKKLE 483
Query: 855 LIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKT 676
L+H D+CGPITP S+ G RY + DDFSRKTW Y L+DK+ F+ FK FK EKE+
Sbjct: 484 LVHSDICGPITPQSNGGIRYFMTFTDDFSRKTWTYLLSDKASAFDVFKKFKVLVEKESNC 543
Query: 675 AICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSE 496
I R DRGGEFTSN FN+FC ++GI+RQLT AYTPQQNGV+ERKN T++NM++ +++
Sbjct: 544 QIMCLRTDRGGEFTSNNFNEFCSNHGIKRQLTTAYTPQQNGVSERKNRTLLNMIRSMMAG 603
Query: 495 KEMPKSLWPEAARWTAHVLNRSYT 424
+ +PKS WPEA +W+ +VLNRS T
Sbjct: 604 RNVPKSFWPEALKWSTYVLNRSPT 627
Score = 85.5 bits (210), Expect(3) = e-121
Identities = 38/63 (60%), Positives = 51/63 (80%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
AVKD+ PEE +G KP V +FR+FG +A+VH+P+ R KLDD+S KCILLG+S+ESK Y+
Sbjct: 629 AVKDITPEEAWSGSKPTVHHFRIFGCLAYVHIPDFNRKKLDDKSIKCILLGLSEESKGYK 688
Query: 239 LYE 231
LY+
Sbjct: 689 LYD 691
Score = 29.6 bits (65), Expect(3) = e-121
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDWNLGTTEAEQ 164
V +S+DV+FEE W+WN + +Q
Sbjct: 697 VIVSKDVVFEESKGWNWNNDSKSQKQ 722
>JAU33683.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Noccaea caerulescens]
Length = 936
Score = 351 bits (901), Expect(3) = e-121
Identities = 163/242 (67%), Positives = 200/242 (82%)
Frame = -2
Query: 1149 IINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILWHRRYRHLNNKSIQIMQQKQMVK 970
I+NT+MTANRMF+V A MK CLK EE++ LWH+RY HLNN SI+ M KQ+VK
Sbjct: 1 IVNTKMTANRMFIVSAI-MKIDMDKCLKAEEDEKACLWHKRYGHLNNTSIRAMLDKQLVK 59
Query: 969 GLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLELIHGDLCGPITPISHSGKRYLL 790
GL ++KE KVC++CN+GKQ R+ KKS+WRA+ KL+LIH DLCGPI+PISHSGKRY+
Sbjct: 60 GLSQMKEASKVCEVCNIGKQHREAIPKKSQWRATEKLKLIHADLCGPISPISHSGKRYIF 119
Query: 789 VLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKTAICGFRIDRGGEFTSNEFNKFC 610
+LIDDFSRK+WIY L++K+E F+ FKTFK+ EKEA T++C R DRGGEFTSN FN+FC
Sbjct: 120 LLIDDFSRKSWIYLLSEKNEAFDVFKTFKSLVEKEAGTSLCSLRTDRGGEFTSNAFNQFC 179
Query: 609 KDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSEKEMPKSLWPEAARWTAHVLNRS 430
K++GI+RQLTAAYTPQQNGVAER+N TIMNMV+CLL+EK MP+S WPEAA+WT HVLNRS
Sbjct: 180 KEHGIQRQLTAAYTPQQNGVAERRNRTIMNMVRCLLTEKNMPRSFWPEAAKWTCHVLNRS 239
Query: 429 YT 424
T
Sbjct: 240 IT 241
Score = 103 bits (257), Expect(3) = e-121
Identities = 48/63 (76%), Positives = 55/63 (87%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
AVKDMVPEE +G+KPNV YFRVFG I HVHVP+Q+R KLD RS KC+LLGVS+ESKAYR
Sbjct: 243 AVKDMVPEECWSGIKPNVGYFRVFGCIGHVHVPDQRRIKLDSRSRKCVLLGVSEESKAYR 302
Query: 239 LYE 231
LY+
Sbjct: 303 LYD 305
Score = 33.9 bits (76), Expect(3) = e-121
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDWNLGTTEAEQDVLAWGDAD 137
V +SRDVIFEE KW W+ ++L WG+ +
Sbjct: 311 VVISRDVIFEEEEKWVWS-ADESGTNEILDWGEEE 344
>GAU16533.1 hypothetical protein TSUD_167640 [Trifolium subterraneum]
Length = 1103
Score = 378 bits (971), Expect(3) = e-121
Identities = 177/324 (54%), Positives = 235/324 (72%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
WF +LDE+F+ SVRLGD S+M+V KG+V+ ++ GI Q + VY++P L NNLLS+GQLQ
Sbjct: 310 WFHDLDESFRESVRLGDDSQMSVMGKGNVKLQMNGIVQIITGVYFIPKLKNNLLSLGQLQ 369
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
EK+L +IK C++YH+ +G+I+ +QM +N++F + A+ + CL+ ED LW
Sbjct: 370 EKNLTFVIKNNWCKVYHRDKGMIMCSQMASNKLFPIMAEAKQV----CLQANIEDITQLW 425
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLE 856
H RY HLN K +Q +QQK MV GLPK +E + VC C GKQ R+ K S W++S +LE
Sbjct: 426 HCRYGHLNIKGLQNLQQKNMVIGLPKFEESNHVCADCLRGKQHRESIPKTSNWKSSKRLE 485
Query: 855 LIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKT 676
LIH D+CGPITP+S+S KRY+L IDD+SRK W Y+L++KS+ FE FK FK EKE
Sbjct: 486 LIHSDICGPITPVSNSNKRYVLTFIDDYSRKIWAYYLSNKSDAFECFKKFKCMVEKETSE 545
Query: 675 AICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSE 496
IC R DRGGEF S+EF +FC+ NGI+RQLTAAYTPQQNG+AERKN TIM M++C+L+
Sbjct: 546 TICCLRTDRGGEFNSDEFKEFCEVNGIKRQLTAAYTPQQNGIAERKNRTIMEMIRCMLAG 605
Query: 495 KEMPKSLWPEAARWTAHVLNRSYT 424
K +PK+ WPEA W +VLNRS T
Sbjct: 606 KSVPKAFWPEAVNWAIYVLNRSPT 629
Score = 82.4 bits (202), Expect(3) = e-121
Identities = 35/62 (56%), Positives = 49/62 (79%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
A+KDM PEE + KP+V +F++FG IA+ HVP+ +R KLDD+S KC+ G+S+E+KAYR
Sbjct: 631 AIKDMTPEEVWSSTKPSVKHFKIFGCIAYAHVPDAQRKKLDDKSVKCVFFGISEETKAYR 690
Query: 239 LY 234
LY
Sbjct: 691 LY 692
Score = 26.9 bits (58), Expect(3) = e-121
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDWNLGTTEAEQDVLAWGDAD 137
+ +SRDV F E KW W+ + + + V++ ++D
Sbjct: 699 IIISRDVKFVEKDKWKWDEKSEKLAEQVISDEESD 733
>KYP63625.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 930
Score = 366 bits (940), Expect(3) = e-120
Identities = 177/324 (54%), Positives = 228/324 (70%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
+F ELDE F SV+LG++S M V KG++R +V G+ S +YVP L NNLL +GQLQ
Sbjct: 291 YFSELDETFSDSVKLGNNSNMVVNGKGNIRLDVNGVISIISGGFYVPELKNNLLGLGQLQ 350
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
EK L IL ++G C+IYH +GLI+ + M++NRMF+++A ++ P+ C ED LW
Sbjct: 351 EKGLSILFQQGKCKIYHPDKGLIMQSNMSSNRMFILHAISL-PVAPTCFNTVTEDVAQLW 409
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLE 856
H R+ HL+ K +Q +QQK MV+GL LK K+CK +GKQ R F KS WRAS L+
Sbjct: 410 HCRFGHLSFKGLQTLQQKGMVEGLAMLKPPSKLCKDYLIGKQHRDSFPMKSSWRASQILQ 469
Query: 855 LIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKT 676
L+H D+CGPI P+S+S KRYLL IDDFSRKTW+YFLA+KSE F FK+FK EK
Sbjct: 470 LVHADICGPIKPVSNSKKRYLLTFIDDFSRKTWVYFLAEKSEAFTVFKSFKLHVEKATNM 529
Query: 675 AICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSE 496
++ G R D GGEFTS EFN F +G++RQLTAAY+PQQNGVAERKN TIMN+V+ +LSE
Sbjct: 530 SLKGLRTDLGGEFTSREFNNFFHAHGVQRQLTAAYSPQQNGVAERKNRTIMNLVRSMLSE 589
Query: 495 KEMPKSLWPEAARWTAHVLNRSYT 424
K++PK+ WPEA W HVLN T
Sbjct: 590 KKVPKTFWPEAVNWAVHVLNHCPT 613
Score = 86.7 bits (213), Expect(3) = e-120
Identities = 38/63 (60%), Positives = 52/63 (82%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
AVK+ PEE +G+KP+V +FRVFG +++ HVP+ R+KLD +S KC+LLG+SDESKAYR
Sbjct: 615 AVKEKTPEEAWSGIKPSVQHFRVFGCVSYAHVPDNLRSKLDAKSLKCVLLGISDESKAYR 674
Query: 239 LYE 231
LY+
Sbjct: 675 LYD 677
Score = 30.8 bits (68), Expect(3) = e-120
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDWN--LGTTEAEQDVLAWGDADDI 131
+ +SRDV+F E W+WN TT E L W D D +
Sbjct: 683 IIISRDVVFAENEAWEWNNHESTTICE---LEWEDDDKV 718
>GAU15733.1 hypothetical protein TSUD_235460 [Trifolium subterraneum]
Length = 1067
Score = 372 bits (954), Expect(3) = e-120
Identities = 174/324 (53%), Positives = 231/324 (71%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
W + D +F+ SVRLG+ +KM+V KG+V+ + G SNVYY+P L NLLS+GQLQ
Sbjct: 307 WLYDFDPSFRDSVRLGNDAKMSVMGKGNVKLFMNGSVHVISNVYYLPGLNTNLLSVGQLQ 366
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
+K + ++ K TCR YH ++GLI +TQM+ANRM+ + A M P+ CL+ ED LW
Sbjct: 367 QKSVTVIFKNDTCRAYHDEKGLIFSTQMSANRMYTLTAPVMIPM---CLQTSNEDQTQLW 423
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLE 856
H RY HL+ ++++ K MVKGLP ++E+ + C C +GKQQR+ K++KWRA+ KL+
Sbjct: 424 HNRYGHLSVNGLKLLSSKDMVKGLPAIREMSERCIDCLIGKQQREVIPKQAKWRANTKLQ 483
Query: 855 LIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKT 676
LIH D+CGPI P S+ GKRY L L DDFSRKTW+Y L +KSE FETFK FK E E+
Sbjct: 484 LIHSDICGPINPCSNGGKRYFLTLTDDFSRKTWVYVLKEKSEAFETFKNFKALVEIESGC 543
Query: 675 AICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSE 496
I R DRGGEFTSN FN+FCK GI+RQLT AYTPQQNGV+ERKN T++N+V+ +L+
Sbjct: 544 VIQMLRTDRGGEFTSNVFNEFCKTKGIKRQLTTAYTPQQNGVSERKNRTLLNIVRSVLAC 603
Query: 495 KEMPKSLWPEAARWTAHVLNRSYT 424
+ +PKS WPEA +W A+V+NRS T
Sbjct: 604 RNVPKSFWPEALKWAAYVMNRSPT 627
Score = 84.0 bits (206), Expect(3) = e-120
Identities = 37/62 (59%), Positives = 50/62 (80%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
+V+DM PEE +GVKP+V +FR F +A+ HVP+ R KLD++S KC+LLG+SDESKAY+
Sbjct: 629 SVRDMTPEEAWSGVKPSVKHFRTFDCLAYAHVPDSHRKKLDNKSIKCVLLGISDESKAYK 688
Query: 239 LY 234
LY
Sbjct: 689 LY 690
Score = 27.7 bits (60), Expect(3) = e-120
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDW 191
+ +SRDV+F+E WDW
Sbjct: 697 IVISRDVVFDETKGWDW 713
>GAU43961.1 hypothetical protein TSUD_283880 [Trifolium subterraneum]
Length = 1273
Score = 369 bits (948), Expect(3) = e-119
Identities = 174/324 (53%), Positives = 231/324 (71%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
W E D +F+ SVRLG+ +KM V KG+V+ + G SNVYY+P L NLLS+GQLQ
Sbjct: 307 WLYEFDPSFRDSVRLGNDAKMCVMGKGNVKLFMNGSIHVISNVYYLPGLNTNLLSVGQLQ 366
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
+K++ I+ K CR YH ++GLI +TQM+AN M+++ A + P+ CL+ ED LW
Sbjct: 367 QKNVTIIFKNDACRAYHDEKGLIFSTQMSANIMYILAAPVIVPM---CLQTSIEDKTQLW 423
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLE 856
H RY HL+ K ++I+ K MVKGLP L E+++ C C +GKQQR+ K++KWRA+ KL+
Sbjct: 424 HNRYGHLSVKGLKILNSKDMVKGLPALGEMNERCTDCLIGKQQREVIPKQAKWRATTKLQ 483
Query: 855 LIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKT 676
LIH D+CGPI P S+ GKRY L L DDFSRKTW+Y L +KSE FETF+ FK E ++
Sbjct: 484 LIHSDICGPINPCSNGGKRYFLTLTDDFSRKTWVYILKEKSEAFETFRNFKAMVELKSGC 543
Query: 675 AICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSE 496
I R DRGGEFTSN FN+FCK GI+RQLT AYTPQQNGV+ERKN T++N+V+ +L+
Sbjct: 544 VIQMLRTDRGGEFTSNAFNEFCKSKGIKRQLTTAYTPQQNGVSERKNRTLLNIVRSMLAC 603
Query: 495 KEMPKSLWPEAARWTAHVLNRSYT 424
+ +PKS WPEA +W A+V+NRS T
Sbjct: 604 RNVPKSFWPEALKWAAYVMNRSPT 627
Score = 84.7 bits (208), Expect(3) = e-119
Identities = 38/62 (61%), Positives = 50/62 (80%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
+V+DM PEE +GVKP+V +FR FG +A+ HVP +R KLD+RS C+LLG+SDESKAY+
Sbjct: 629 SVRDMTPEEAWSGVKPSVKHFRTFGCLAYAHVPYSQRRKLDNRSITCVLLGISDESKAYK 688
Query: 239 LY 234
LY
Sbjct: 689 LY 690
Score = 28.5 bits (62), Expect(3) = e-119
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDW 191
+ +SRDV+F+E WDW
Sbjct: 697 IVISRDVVFDEAKGWDW 713
>GAU42405.1 hypothetical protein TSUD_324600 [Trifolium subterraneum]
Length = 1302
Score = 375 bits (962), Expect(3) = e-119
Identities = 175/323 (54%), Positives = 233/323 (72%)
Frame = -2
Query: 1392 FIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQE 1213
F +LDE+F+ SVRLGD S+M+V EKG+V+ + GI Q + V+++P L NNLLS+GQ QE
Sbjct: 311 FHDLDESFRESVRLGDDSQMSVMEKGNVKLHINGIVQIITGVHFIPKLKNNLLSLGQFQE 370
Query: 1212 KHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILWH 1033
K L +IK C++YH+ +G+I+ +QM +N++F + A+ + CL+ ED LWH
Sbjct: 371 KSLTFVIKNNWCKVYHRDKGMIMCSQMASNKLFPIMAEAKQV----CLQANTEDITQLWH 426
Query: 1032 RRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLEL 853
RY HLN K +Q +QQK MV GLPK +E + VC C GKQ R+ K S W++S +LEL
Sbjct: 427 CRYGHLNIKGLQNLQQKNMVIGLPKFEESNHVCADCLRGKQHRESIPKTSNWKSSKRLEL 486
Query: 852 IHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKTA 673
IH D+CGPITP+S+S KRY+L IDD+SRK W+Y+L++KS+ FE FK FK EKE
Sbjct: 487 IHSDICGPITPVSNSNKRYVLTFIDDYSRKIWVYYLSNKSDAFECFKKFKCMVEKETSET 546
Query: 672 ICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSEK 493
IC R DRGGEF S+EF +FC+ NGI+RQLTAAYTPQQNG+AERKN TIM M++C+L+ K
Sbjct: 547 ICCLRTDRGGEFNSDEFKEFCEVNGIKRQLTAAYTPQQNGIAERKNRTIMEMIRCMLAGK 606
Query: 492 EMPKSLWPEAARWTAHVLNRSYT 424
+PK+ WPEA W +VLNRS T
Sbjct: 607 SVPKAFWPEAVNWAIYVLNRSPT 629
Score = 80.9 bits (198), Expect(3) = e-119
Identities = 34/62 (54%), Positives = 48/62 (77%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
A+KDM PEE + KP+V +F++FG IA+ H P+ +R KLDD+S KC+ G+S+E+KAYR
Sbjct: 631 AIKDMTPEEVWSSTKPSVKHFKIFGCIAYAHAPDAQRKKLDDKSVKCVFFGISEETKAYR 690
Query: 239 LY 234
LY
Sbjct: 691 LY 692
Score = 26.6 bits (57), Expect(3) = e-119
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDWNLGTTEAEQDVLAWGDAD 137
+ SRDV F E KW W+ + + + V++ ++D
Sbjct: 699 IIFSRDVKFVEKDKWKWDEKSEKLAEQVISDEESD 733
>GAU32260.1 hypothetical protein TSUD_53880 [Trifolium subterraneum]
Length = 1172
Score = 380 bits (976), Expect(2) = e-119
Identities = 178/324 (54%), Positives = 230/324 (70%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
W + D+ FK SV+LGD S+MAV KG+++ +EG Q +NVYY+P L NNLLSIGQLQ
Sbjct: 295 WLFDYDDTFKDSVKLGDDSRMAVVGKGNLKLHIEGYVQILTNVYYLPGLKNNLLSIGQLQ 354
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
+K+L I+ K TC++YH ++GLI+ + M+ NRM+++ A + P C K+ + D + LW
Sbjct: 355 QKNLTIIFKNDTCKVYHDEKGLIMTSHMSMNRMYVIKAPVVIP-QSQCFKITKNDEDTLW 413
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLE 856
H+RY HL+ K I ++ QK MV GLPKLKE + C C GKQQR+ KKS WRAS+KLE
Sbjct: 414 HKRYGHLSFKGINVLVQKNMVIGLPKLKEPTEKCTHCMKGKQQRENVPKKSHWRASHKLE 473
Query: 855 LIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKT 676
LIH D+CGPI P S+ KRY + DD SRKTW F+++KSE TF+ FK E E+K
Sbjct: 474 LIHSDICGPINPESNGKKRYFITFTDDMSRKTWTCFISEKSEALSTFQKFKAKVENESKH 533
Query: 675 AICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSE 496
I R DRGGE+TSN FN+FC NGI+RQLTA+YTP QNGV+ERKN TIMNMV+C+ SE
Sbjct: 534 VIKCLRTDRGGEYTSNAFNEFCDGNGIKRQLTASYTPHQNGVSERKNQTIMNMVRCMNSE 593
Query: 495 KEMPKSLWPEAARWTAHVLNRSYT 424
K +PK+LWPEA W H+LNR T
Sbjct: 594 KNVPKNLWPEAVNWAVHILNRCPT 617
Score = 80.1 bits (196), Expect(2) = e-119
Identities = 35/63 (55%), Positives = 51/63 (80%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
AVKDM P+E +G KP+V +F+VFG IA+VH+P+ R K+D++S CI LG+S+ESKA++
Sbjct: 619 AVKDMTPQEAWSGSKPSVSHFKVFGCIAYVHIPDNLRKKIDEKSTVCIHLGISEESKAFK 678
Query: 239 LYE 231
LY+
Sbjct: 679 LYD 681
>KOM33859.1 hypothetical protein LR48_Vigan02g000900 [Vigna angularis]
Length = 1349
Score = 356 bits (913), Expect(3) = e-119
Identities = 179/326 (54%), Positives = 228/326 (69%), Gaps = 2/326 (0%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
WF + +E +V+LG+++ M V KG +R ++ G TQ S+VY VP L NNLLS+GQLQ
Sbjct: 320 WFSDFEEGLCKTVKLGNNTTMKVVGKGCIRVKIHGFTQVISDVYLVPELKNNLLSLGQLQ 379
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEE-DSEI- 1042
EK L ILI++G+C+I+H ++GLII+++M +NRMF V A P C++ D E
Sbjct: 380 EKGLSILIQQGSCKIFHPEKGLIIHSKMKSNRMFYVTAC-ATPKESMCMQTNSSFDQETH 438
Query: 1041 LWHRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNK 862
LWH R+ HL+ + + K+MV GLP LK +++C+ C +GKQ+R+ KK WRAS +
Sbjct: 439 LWHCRFCHLSYGGLNTLASKEMVTGLPPLKFQNRICETCLIGKQKREPKPKKCLWRASKQ 498
Query: 861 LELIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEA 682
L+LIH D+CGPITP S+S KRY+L IDDFSRKTWIYFL +KSE FK FK EKEA
Sbjct: 499 LQLIHADICGPITPSSNSNKRYILTFIDDFSRKTWIYFLQEKSEALTMFKRFKASVEKEA 558
Query: 681 KTAICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLL 502
I R DRGGEFTS EF +FCK GI RQLTAAYTPQQNGVAERKN TIMN V+ L
Sbjct: 559 DMCITCLRTDRGGEFTSMEFEEFCKTQGISRQLTAAYTPQQNGVAERKNKTIMNAVRATL 618
Query: 501 SEKEMPKSLWPEAARWTAHVLNRSYT 424
+ K++PK+ WPEAARW HV NRS T
Sbjct: 619 NGKQVPKAFWPEAARWCVHVQNRSPT 644
Score = 88.2 bits (217), Expect(3) = e-119
Identities = 39/63 (61%), Positives = 49/63 (77%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
AV+ PEE G KP V YFRVFG +AH H+P QKR+KLDD+S +C+ LGVSDESKAY+
Sbjct: 646 AVEQKTPEEVWCGKKPRVDYFRVFGCVAHAHIPNQKRSKLDDKSKRCVFLGVSDESKAYK 705
Query: 239 LYE 231
L++
Sbjct: 706 LFD 708
Score = 36.6 bits (83), Expect(3) = e-119
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDWNLGTTEAEQDVLAWGD 143
V +SRDVIFEE WDW + DVL W +
Sbjct: 714 VIISRDVIFEEDKSWDWEGPKETSSTDVLDWDE 746
>GAU31303.1 hypothetical protein TSUD_315120 [Trifolium subterraneum]
Length = 1229
Score = 359 bits (922), Expect(3) = e-118
Identities = 163/324 (50%), Positives = 225/324 (69%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
W E D F+ SVRLG+ +KM V K +V+ + G SNVYY+P L N LS+GQLQ
Sbjct: 306 WLYEFDATFRDSVRLGNDAKMCVMGKSNVKMFINGSVHVISNVYYLPGLNTNFLSVGQLQ 365
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
++++ I+ K+ CR YH ++GLI +TQM+ NRM+++ + P+ CL++ +ED LW
Sbjct: 366 QRNVTIIFKDDICRAYHDEKGLIFSTQMSTNRMYILTTSVIVPM---CLQISKEDKNQLW 422
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLE 856
H RY H++ + ++++ K MVKGLP L+E+D+ C C +GKQQR+ K++KWRA+ KL+
Sbjct: 423 HNRYGHISMQRLKLLNSKDMVKGLPALEEMDEKCTDCLIGKQQREAIPKQAKWRATTKLQ 482
Query: 855 LIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKT 676
LIH D+C PI P S+ GKRY L DDFSRKTW+Y L +KSE F+ FK FK E E+
Sbjct: 483 LIHSDICEPINPCSNGGKRYFLTFTDDFSRKTWVYVLKEKSEAFDIFKNFKALIEVESGC 542
Query: 675 AICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSE 496
I R DRGGEFTSN FN+FC I+RQLT AYTPQQNGV+ERKN T++N+V+ +L+
Sbjct: 543 LIQALRTDRGGEFTSNAFNEFCNSKDIKRQLTTAYTPQQNGVSERKNRTLLNIVRSMLAS 602
Query: 495 KEMPKSLWPEAARWTAHVLNRSYT 424
K +PK+ WPEA +W +V+NRS T
Sbjct: 603 KNVPKNFWPEALKWATYVMNRSPT 626
Score = 92.0 bits (227), Expect(3) = e-118
Identities = 42/62 (67%), Positives = 54/62 (87%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
+VKD+ PEE +GVKP+V +FRVFG +A+VHVPE +R KLD+RS KC+LLG+SDESKAY+
Sbjct: 628 SVKDLTPEEAWSGVKPSVLHFRVFGCLAYVHVPENQRKKLDNRSIKCVLLGLSDESKAYK 687
Query: 239 LY 234
LY
Sbjct: 688 LY 689
Score = 27.3 bits (59), Expect(3) = e-118
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDW 191
+ +S+DV+F+E WDW
Sbjct: 696 IMISKDVVFDEAKGWDW 712
>KYP74877.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1232
Score = 353 bits (905), Expect(3) = e-117
Identities = 175/324 (54%), Positives = 219/324 (67%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
WF ELDENF+H V+LG+ + +AV KGSVR V GI ++VYYVP L NNLLSI QLQ
Sbjct: 219 WFSELDENFRHKVKLGNDTCIAVMGKGSVRMLVNGIIHVITHVYYVPELKNNLLSIWQLQ 278
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
EK L I I+ C + H +RGLI+ +M+ANRMF++ A C + ED+ LW
Sbjct: 279 EKGLSITIQNKKCNVVHSERGLIMEVRMSANRMFVLTATMRVE---TCFQAYAEDNSQLW 335
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLE 856
H R HL+ ++ + KQMV GL + ++C C GKQ R KKS WRAS +L+
Sbjct: 336 HNRLGHLSYDGLKTLVSKQMVTGLSAIITPQEICTHCLAGKQHRNTMPKKSLWRASKRLQ 395
Query: 855 LIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKT 676
LIH DLCGPI P S+S K+Y+L IDD SRKTW+YFL++KSE F FK FK EKEA
Sbjct: 396 LIHADLCGPIQPTSNSNKKYILSFIDDLSRKTWVYFLSEKSETFSLFKGFKALVEKEAGE 455
Query: 675 AICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSE 496
+I R DRGGEF+S F +FC+ GI+RQLTAAYTPQQNGVAERKN TIMNMV+ +L
Sbjct: 456 SIICLRTDRGGEFSSKAFEEFCRSQGIKRQLTAAYTPQQNGVAERKNRTIMNMVRSMLIG 515
Query: 495 KEMPKSLWPEAARWTAHVLNRSYT 424
+++PK WPEA +W H+LNRS T
Sbjct: 516 RQVPKIFWPEATKWCVHILNRSPT 539
Score = 89.0 bits (219), Expect(3) = e-117
Identities = 40/62 (64%), Positives = 51/62 (82%)
Frame = -3
Query: 416 VKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYRL 237
V+D PEE +GVKP+V YFRVFG +AHVH +Q+R KLDD+S +C+L GVSDESKAYRL
Sbjct: 542 VQDQTPEEAWSGVKPSVGYFRVFGCLAHVHTLDQQRIKLDDKSKQCVLFGVSDESKAYRL 601
Query: 236 YE 231
++
Sbjct: 602 FD 603
Score = 33.1 bits (74), Expect(3) = e-117
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDWNLGTTEAEQDVLAW 149
+ +S+DVIFEE W+W E + +++ W
Sbjct: 609 IIISKDVIFEEHKSWNWEQNKAENQLEIVEW 639
>GAU44758.1 hypothetical protein TSUD_246510 [Trifolium subterraneum]
Length = 1301
Score = 369 bits (947), Expect(3) = e-117
Identities = 166/324 (51%), Positives = 228/324 (70%)
Frame = -2
Query: 1395 WFIELDENFKHSVRLGDSSKMAVEEKGSVRFEVEGITQTASNVYYVPNLTNNLLSIGQLQ 1216
W E DE + SV+LGD S+MAV+ KG+V+ + G+ SNVY+VP L NLLSIGQLQ
Sbjct: 312 WMFEFDETYSDSVKLGDDSRMAVKGKGNVKLCINGVVHVISNVYFVPGLKTNLLSIGQLQ 371
Query: 1215 EKHLVILIKEGTCRIYHQQRGLIINTQMTANRMFLVYAKNMKPLPGNCLKMEEEDSEILW 1036
+K + ++ K C++YH +GL+ T+MT N M++V A + P+ CL+ +++S +LW
Sbjct: 372 QKQITVIFKNDMCKVYHDDKGLLFTTEMTNNMMYIVSATVISPM---CLRTAKQESTLLW 428
Query: 1035 HRRYRHLNNKSIQIMQQKQMVKGLPKLKEVDKVCKMCNVGKQQRQEFTKKSKWRASNKLE 856
H R+ H + K + + +KQMV+GLP+L+E+++ C C GKQ R K++KWRAS KLE
Sbjct: 429 HNRFAHFSFKGLNALAKKQMVRGLPELEELEENCVDCLSGKQHRGTIPKQAKWRASTKLE 488
Query: 855 LIHGDLCGPITPISHSGKRYLLVLIDDFSRKTWIYFLADKSEVFETFKTFKNFAEKEAKT 676
LIH D+CGPI P S+ G RY + DD+SR TW+Y + +KS FE FK FK EKE T
Sbjct: 489 LIHSDICGPINPSSNGGNRYFITFTDDYSRMTWVYVMKEKSSAFEVFKVFKAMVEKETGT 548
Query: 675 AICGFRIDRGGEFTSNEFNKFCKDNGIRRQLTAAYTPQQNGVAERKNWTIMNMVQCLLSE 496
+I R DRGGE+TSN FN+FC++ GI+RQLTAAYTPQQNGV+ERKN T++NMV+ ++S
Sbjct: 549 SIVCLRSDRGGEYTSNVFNEFCREEGIKRQLTAAYTPQQNGVSERKNRTLLNMVRSMISA 608
Query: 495 KEMPKSLWPEAARWTAHVLNRSYT 424
+ MPK +WPEA W HV+NRS T
Sbjct: 609 RNMPKQIWPEAVIWATHVINRSPT 632
Score = 78.6 bits (192), Expect(3) = e-117
Identities = 35/63 (55%), Positives = 47/63 (74%)
Frame = -3
Query: 419 AVKDMVPEERLTGVKPNV*YFRVFGSIAHVHVPEQKRTKLDDRSHKCILLGVSDESKAYR 240
+VKDM P+E + KP V YF+ FG +AHVH+ + R KLD +S C+LLGVS+ESKAY+
Sbjct: 634 SVKDMTPQEAWSEKKPVVHYFKTFGCLAHVHINDANRKKLDSKSKSCVLLGVSEESKAYK 693
Query: 239 LYE 231
LY+
Sbjct: 694 LYD 696
Score = 26.9 bits (58), Expect(3) = e-117
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 241 VCMSRDVIFEEGGKWDWN 188
+ +SRDV+FEE W+W+
Sbjct: 702 IIISRDVVFEELKTWNWD 719