BLASTX nr result

ID: Panax25_contig00034550 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00034550
         (529 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZN07220.1 hypothetical protein DCAR_008057 [Daucus carota subsp...    62   4e-08
XP_017235116.1 PREDICTED: helicase-like transcription factor CHR...    62   5e-08

>KZN07220.1 hypothetical protein DCAR_008057 [Daucus carota subsp. sativus]
          Length = 675

 Score = 62.0 bits (149), Expect = 4e-08
 Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
 Frame = -3

Query: 458 YRSLM--AIDGEVGGITYG------VANGLSSKKQPFLMKDEKND--ELFASHGAAYRSF 309
           YR L   A+D  VG  TY       + +   S  Q   MKDE ++  +    +GA  R F
Sbjct: 256 YRMLFDNAVDNAVGK-TYSAQFLPQITSNSCSNVQSICMKDEISNLQDHVTMNGATGRKF 314

Query: 308 IDVDVVGRRPSRIAAGLSRKKQMFHVKDEKNEETFSAQGTAYQFRMDVDDVSGRKSSGVA 129
              D            +S K Q FH+KDE     ++ QG+A    +D+D V+ RK S +A
Sbjct: 315 SGADQ-----------MSCKNQSFHLKDE----WYATQGSANSTTVDLDYVAERKPSEIA 359

Query: 128 DGIFAD---RQXXXXXXXXXXXXSQVVENDEISDILIASNRAHH 6
           DG+  D   RQ            SQV+  DEISD+  AS++A+H
Sbjct: 360 DGLSTDKNLRQPLTGKLASTIRKSQVIAKDEISDVYFASSKANH 403


>XP_017235116.1 PREDICTED: helicase-like transcription factor CHR28 [Daucus carota
           subsp. sativus]
          Length = 1317

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
 Frame = -3

Query: 458 YRSLM--AIDGEVGGITYG------VANGLSSKKQPFLMKDEKND--ELFASHGAAYRSF 309
           YR L   A+D  VG  TY       + +   S  Q   MKDE ++  +    +GA  R F
Sbjct: 258 YRMLFDNAVDNAVGK-TYSAQFLPQITSNSCSNVQSICMKDEISNLQDHVTMNGATGRKF 316

Query: 308 IDVDVVGRRPSRIAAGLSRKKQMFHVKDEKNEETFSAQGTAYQFRMDVDDVSGRKSSGVA 129
              D            +S K Q FH+KDE     ++ QG+A    +D+D V+ RK S +A
Sbjct: 317 SGADQ-----------MSCKNQSFHLKDE----WYATQGSANSTTVDLDYVAERKPSEIA 361

Query: 128 DGIFAD---RQXXXXXXXXXXXXSQVVENDEISDILIASNRAHH 6
           DG+  D   RQ            SQV+  DEISD+  AS++A+H
Sbjct: 362 DGLSTDKNLRQPLTGKLASTIRKSQVIAKDEISDVYFASSKANH 405


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