BLASTX nr result
ID: Panax25_contig00034503
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00034503
(361 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_015888898.1 PREDICTED: uncharacterized protein LOC107423781, ... 70 9e-12
EEF40894.1 DNA repair helicase rad5,16, putative [Ricinus communis] 64 2e-09
XP_002521404.2 PREDICTED: uncharacterized protein LOC8279107 [Ri... 64 2e-09
EOY28343.1 SWI/SNF-related matrix-associated actin-dependent reg... 58 2e-07
XP_017978679.1 PREDICTED: helicase-like transcription factor CHR... 57 4e-07
XP_017978678.1 PREDICTED: helicase-like transcription factor CHR... 57 4e-07
OMO65057.1 putative DNA repair helicase rad5,16 [Corchorus olito... 57 5e-07
OMO76503.1 SNF2-related protein [Corchorus capsularis] 57 7e-07
OAY24762.1 hypothetical protein MANES_17G041600 [Manihot esculenta] 57 7e-07
CAN82215.1 hypothetical protein VITISV_020421 [Vitis vinifera] 56 9e-07
CDO99602.1 unnamed protein product [Coffea canephora] 56 1e-06
CBI18752.3 unnamed protein product, partial [Vitis vinifera] 54 4e-06
XP_019073139.1 PREDICTED: helicase-like transcription factor CHR... 54 4e-06
XP_002263027.3 PREDICTED: helicase-like transcription factor CHR... 54 4e-06
XP_010107056.1 SMARCA3-like protein 2 [Morus notabilis] EXC53897... 54 6e-06
>XP_015888898.1 PREDICTED: uncharacterized protein LOC107423781, partial [Ziziphus
jujuba]
Length = 1159
Score = 70.5 bits (171), Expect = 9e-12
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 12/110 (10%)
Frame = +3
Query: 9 SYNSETSDTRTGISEGSFDSK---SVIFDHAKQQSSTPNGSPVHSISGSLTEWISQK--- 170
SYNSE SD+ T +S SF+S +++FD KQ+ S S V+ S S +WIS +
Sbjct: 106 SYNSEASDSGTAVSGSSFNSSVNHNIMFDCNKQEHSVHTDSYVNDCSASPKDWISLRPGN 165
Query: 171 ASYYSQDSLLKIPGCHDKSSFTAGDTDHVSDIGGTLD------ETEFELR 302
+ +++ + + +P C SSF GDT++VSD+G D ETE +LR
Sbjct: 166 GTCFNERAAVLVPTCSTSSSFAEGDTNNVSDLGDNFDVNILQGETELQLR 215
>EEF40894.1 DNA repair helicase rad5,16, putative [Ricinus communis]
Length = 1109
Score = 63.5 bits (153), Expect = 2e-09
Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Frame = +3
Query: 12 YNSETSDTRTGISEGSFD---SKSVIFDHAKQQSSTPNGSPVHSISGSLTEWISQKASYY 182
Y S D R G S SFD S ++ F+ + S+ +H+ SGS EWIS +S
Sbjct: 101 YPSHKPDARIGGSVTSFDNAGSHTMAFNDVNLEPSSQISCHMHACSGSFKEWISPVSSQG 160
Query: 183 SQ-DSLLK--IPGCHDKSSFTAGDTDHVSDIGGTLD------ETEFELRCLELSSDSKD 332
+ D LL+ IP C SSF G+++HVSDI G LD ET + R ++DSKD
Sbjct: 161 DKRDGLLQSGIPSCSTSSSFADGESNHVSDITGNLDFNILFGETGTQFRYAGGNTDSKD 219
>XP_002521404.2 PREDICTED: uncharacterized protein LOC8279107 [Ricinus communis]
Length = 1112
Score = 63.5 bits (153), Expect = 2e-09
Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Frame = +3
Query: 12 YNSETSDTRTGISEGSFD---SKSVIFDHAKQQSSTPNGSPVHSISGSLTEWISQKASYY 182
Y S D R G S SFD S ++ F+ + S+ +H+ SGS EWIS +S
Sbjct: 104 YPSHKPDARIGGSVTSFDNAGSHTMAFNDVNLEPSSQISCHMHACSGSFKEWISPVSSQG 163
Query: 183 SQ-DSLLK--IPGCHDKSSFTAGDTDHVSDIGGTLD------ETEFELRCLELSSDSKD 332
+ D LL+ IP C SSF G+++HVSDI G LD ET + R ++DSKD
Sbjct: 164 DKRDGLLQSGIPSCSTSSSFADGESNHVSDITGNLDFNILFGETGTQFRYAGGNTDSKD 222
>EOY28343.1 SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 3-like 3, putative
[Theobroma cacao]
Length = 1382
Score = 58.2 bits (139), Expect = 2e-07
Identities = 39/88 (44%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 12 YNSETSDTRTGISEGSFDSKSVIFDHAKQQSSTPNGSPVHSISGSLTEW--ISQKASYYS 185
Y+SE SD R G GSFD H K +SS N SPV + S S EW I Q SY
Sbjct: 100 YSSEASDARAGSVGGSFDF------HGKLESSAQNCSPVQTSSASFKEWFPIGQGTSYTE 153
Query: 186 --QDSLLKIPGCHDKSSFTAGDTDHVSD 263
SLL++P C SSF D +HV D
Sbjct: 154 GVGMSLLEVPSCSTASSFAEIDGNHVLD 181
>XP_017978679.1 PREDICTED: helicase-like transcription factor CHR28 isoform X2
[Theobroma cacao]
Length = 1371
Score = 57.4 bits (137), Expect = 4e-07
Identities = 39/88 (44%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 12 YNSETSDTRTGISEGSFDSKSVIFDHAKQQSSTPNGSPVHSISGSLTEW--ISQKASYYS 185
Y+SE SD R G GSFD H K +SS N SPV + S S EW I Q SY
Sbjct: 89 YSSEASDARAGSVGGSFDF------HGKLESSAQNCSPVQTSSASFKEWFPIGQGTSYTE 142
Query: 186 --QDSLLKIPGCHDKSSFTAGDTDHVSD 263
SLL++P C SSF D +HV D
Sbjct: 143 GVGMSLLEMPSCSTASSFAEIDGNHVLD 170
>XP_017978678.1 PREDICTED: helicase-like transcription factor CHR28 isoform X1
[Theobroma cacao]
Length = 1382
Score = 57.4 bits (137), Expect = 4e-07
Identities = 39/88 (44%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 12 YNSETSDTRTGISEGSFDSKSVIFDHAKQQSSTPNGSPVHSISGSLTEW--ISQKASYYS 185
Y+SE SD R G GSFD H K +SS N SPV + S S EW I Q SY
Sbjct: 100 YSSEASDARAGSVGGSFDF------HGKLESSAQNCSPVQTSSASFKEWFPIGQGTSYTE 153
Query: 186 --QDSLLKIPGCHDKSSFTAGDTDHVSD 263
SLL++P C SSF D +HV D
Sbjct: 154 GVGMSLLEMPSCSTASSFAEIDGNHVLD 181
>OMO65057.1 putative DNA repair helicase rad5,16 [Corchorus olitorius]
Length = 304
Score = 56.6 bits (135), Expect = 5e-07
Identities = 39/93 (41%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +3
Query: 15 NSETSDTRTGISEGSFDSKSVIFDHAKQQSSTPNGSPVHSISGSLTEWIS--QKASYYSQ 188
NS+TSD RTG +GS D H K + S N SPV + S S EW S Q SY +
Sbjct: 97 NSDTSDARTGPVDGSLDY------HGKLELSAQNCSPVQASSASFKEWYSSCQGTSYTER 150
Query: 189 --DSLLKIPGCHDKSSFTAGDTDHVSDIGGTLD 281
SLL++P C SSF D + V D G L+
Sbjct: 151 VGMSLLEMPSCSTASSFAEMDGNQVLDHGDNLN 183
>OMO76503.1 SNF2-related protein [Corchorus capsularis]
Length = 1359
Score = 56.6 bits (135), Expect = 7e-07
Identities = 39/93 (41%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +3
Query: 15 NSETSDTRTGISEGSFDSKSVIFDHAKQQSSTPNGSPVHSISGSLTEWIS--QKASYYSQ 188
NS+TSD RTG +GS D H K + S N SPV + S S EW S Q SY +
Sbjct: 97 NSDTSDARTGPVDGSLDY------HGKLELSAQNCSPVQASSASFKEWYSTCQGTSYTER 150
Query: 189 --DSLLKIPGCHDKSSFTAGDTDHVSDIGGTLD 281
SLL++P C SSF D + V D G L+
Sbjct: 151 VGMSLLEMPSCSTASSFAEMDGNQVLDHGDNLN 183
>OAY24762.1 hypothetical protein MANES_17G041600 [Manihot esculenta]
Length = 1381
Score = 56.6 bits (135), Expect = 7e-07
Identities = 43/121 (35%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Frame = +3
Query: 9 SYNSETSDTRTGISEGSFD---SKSVIFDHAKQQSSTPNGSPVHSISGSLTEWISQKASY 179
SYNSE SD R G S S D S +IFD K +S++ SP+HS GS EW S +
Sbjct: 106 SYNSEASDVRIGGSIRSLDHIGSSDMIFDGVKMESASQISSPMHSCPGSFREWCSPFSKD 165
Query: 180 YSQDSL----LKIPGCHDKSSFTAGDTDHVSDIGGTLD------ETEFELRCLELSSDSK 329
+ + +IP C SSF + V D G L ET + + +DSK
Sbjct: 166 QGERRVGVLQSEIPSCSTASSFADEGVNRVLDNTGVLGINLLLRETGAQFGHMGGKNDSK 225
Query: 330 D 332
D
Sbjct: 226 D 226
>CAN82215.1 hypothetical protein VITISV_020421 [Vitis vinifera]
Length = 1435
Score = 56.2 bits (134), Expect = 9e-07
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 28/134 (20%)
Frame = +3
Query: 6 YSYNSETSDTRTGISEGSFDSKSVIFDHAKQQSSTPNGSPVHSISGSLTEWIS------- 164
+S+NSE S + T S+G F+S + S GSPV S SGSL +WIS
Sbjct: 90 HSFNSEASHSITRGSDGLFESAGNSIIECAKLPSAHAGSPVRSGSGSLNDWISHVSGQET 149
Query: 165 --QKASYYSQDSLL-----------KIPGCHDKSSFTAGDTDHVSDIGGTLD-------- 281
++ S SQD+LL +IP C SF AG++++ SD LD
Sbjct: 150 CCKERSGVSQDALLYNRVDSKEIQYEIPNCSTAFSFAAGNSNYASDYTNGLDLNHLNGDT 209
Query: 282 ETEFELRCLELSSD 323
E +F+ +E+ S+
Sbjct: 210 EAQFKHMGVEIHSE 223
>CDO99602.1 unnamed protein product [Coffea canephora]
Length = 1344
Score = 55.8 bits (133), Expect = 1e-06
Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 33/142 (23%)
Frame = +3
Query: 18 SETSDTRTGISEGSFD--SKSVIFDHAKQQSSTPNGSPVHSISGSLTEWI---------- 161
S +SD R GIS+ S D KS + D +K+ S GSPVHS SGSLT+WI
Sbjct: 81 SPSSDIRNGISDASSDYTEKSGVSDGSKRDSRLQLGSPVHSSSGSLTDWIPFQGHGHGNF 140
Query: 162 -------SQKASYYS----QDSLLKIPGCHDKSSFTAG-------DTDHVSDIGGTLDET 287
S+ AS S +++ ++ C + SF AG D VS++ E
Sbjct: 141 CLDKDIVSRNASSNSLQDCRETHQELRNCSETFSFPAGYFSNHVADNREVSNVDQRNHEL 200
Query: 288 EFELRC---LELSSDSKDPPYN 344
E +L C ++ DS + P N
Sbjct: 201 ELQLACSEGVDCDDDSYETPSN 222
>CBI18752.3 unnamed protein product, partial [Vitis vinifera]
Length = 1187
Score = 54.3 bits (129), Expect = 4e-06
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 28/134 (20%)
Frame = +3
Query: 6 YSYNSETSDTRTGISEGSFDSKSVIFDHAKQQSSTPNGSPVHSISGSLTEWIS------- 164
+S+NSE S + T S+G F+S + S GSPV S SGSL +WIS
Sbjct: 53 HSFNSEASHSITRGSDGLFESAGNSIIECAKLPSAHAGSPVRSGSGSLNDWISHVSGQET 112
Query: 165 --QKASYYSQDSL-----------LKIPGCHDKSSFTAGDTDHVSDIGGTLD-------- 281
++ S SQD+L +IP C SF AG++++ SD LD
Sbjct: 113 CCKERSGVSQDALSYNRVDSKEIQYEIPNCSTAFSFAAGNSNYASDYTNGLDLNHLNGDT 172
Query: 282 ETEFELRCLELSSD 323
E +F+ +E+ S+
Sbjct: 173 EAQFKHMGVEIHSE 186
>XP_019073139.1 PREDICTED: helicase-like transcription factor CHR28 isoform X2
[Vitis vinifera]
Length = 1413
Score = 54.3 bits (129), Expect = 4e-06
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 28/134 (20%)
Frame = +3
Query: 6 YSYNSETSDTRTGISEGSFDSKSVIFDHAKQQSSTPNGSPVHSISGSLTEWIS------- 164
+S+NSE S + T S+G F+S + S GSPV S SGSL +WIS
Sbjct: 69 HSFNSEASHSITRGSDGLFESAGNSIIECAKLPSAHAGSPVRSGSGSLNDWISHVSGQET 128
Query: 165 --QKASYYSQDSL-----------LKIPGCHDKSSFTAGDTDHVSDIGGTLD-------- 281
++ S SQD+L +IP C SF AG++++ SD LD
Sbjct: 129 CCKERSGVSQDALSYNRVDSKEIQYEIPNCSTAFSFAAGNSNYASDYTNGLDLNHLNGDT 188
Query: 282 ETEFELRCLELSSD 323
E +F+ +E+ S+
Sbjct: 189 EAQFKHMGVEIHSE 202
>XP_002263027.3 PREDICTED: helicase-like transcription factor CHR28 isoform X1
[Vitis vinifera]
Length = 1434
Score = 54.3 bits (129), Expect = 4e-06
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 28/134 (20%)
Frame = +3
Query: 6 YSYNSETSDTRTGISEGSFDSKSVIFDHAKQQSSTPNGSPVHSISGSLTEWIS------- 164
+S+NSE S + T S+G F+S + S GSPV S SGSL +WIS
Sbjct: 90 HSFNSEASHSITRGSDGLFESAGNSIIECAKLPSAHAGSPVRSGSGSLNDWISHVSGQET 149
Query: 165 --QKASYYSQDSL-----------LKIPGCHDKSSFTAGDTDHVSDIGGTLD-------- 281
++ S SQD+L +IP C SF AG++++ SD LD
Sbjct: 150 CCKERSGVSQDALSYNRVDSKEIQYEIPNCSTAFSFAAGNSNYASDYTNGLDLNHLNGDT 209
Query: 282 ETEFELRCLELSSD 323
E +F+ +E+ S+
Sbjct: 210 EAQFKHMGVEIHSE 223
>XP_010107056.1 SMARCA3-like protein 2 [Morus notabilis] EXC53897.1 SMARCA3-like
protein 2 [Morus notabilis]
Length = 1421
Score = 53.9 bits (128), Expect = 6e-06
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Frame = +3
Query: 9 SYNSETSDTRTGISEGSFDS---KSVIFDHAKQQSSTPNGSPVHSISGSLTEWISQKAS- 176
SYNSE SD+ TG+S GSF S +++IFD Q+ SPV++ S SL +WIS S
Sbjct: 131 SYNSEASDSMTGVSGGSFGSAMNQNLIFDSRVQR------SPVNAWSASLKDWISLAPSD 184
Query: 177 --YYSQDSLLKIPGCHDKSSFTAGDTDHVSD 263
Y S+ + +P S+F D ++ SD
Sbjct: 185 ETYLSERASFSLPTSGTSSNFPQRDANNSSD 215