BLASTX nr result

ID: Panax25_contig00034304 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00034304
         (395 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006357752.1 PREDICTED: protein RMD5 homolog A [Solanum tubero...    72   3e-12
XP_017218532.1 PREDICTED: protein RMD5 homolog A [Daucus carota ...    71   6e-12
XP_011099449.1 PREDICTED: protein RMD5 homolog A [Sesamum indicu...    71   6e-12
XP_016560874.1 PREDICTED: protein RMD5 homolog A-like [Capsicum ...    70   1e-11
XP_004231966.1 PREDICTED: protein RMD5 homolog A [Solanum lycope...    70   1e-11
XP_015066954.1 PREDICTED: protein RMD5 homolog A [Solanum pennel...    70   2e-11
XP_009790615.1 PREDICTED: protein RMD5 homolog A-like [Nicotiana...    68   7e-11
KVH92413.1 CRA domain-containing protein [Cynara cardunculus var...    68   7e-11
XP_007041480.2 PREDICTED: protein RMD5 homolog A [Theobroma caca...    68   1e-10
EOX97310.1 LisH/CRA/RING-U-box domains-containing protein isofor...    68   1e-10
XP_019233518.1 PREDICTED: protein RMD5 homolog A [Nicotiana atte...    67   1e-10
XP_009596780.1 PREDICTED: protein RMD5 homolog A-like [Nicotiana...    67   1e-10
XP_002313209.1 hypothetical protein POPTR_0009s08400g [Populus t...    67   2e-10
KZV53894.1 hypothetical protein F511_00160 [Dorcoceras hygrometr...    67   3e-10
CDP02671.1 unnamed protein product [Coffea canephora]                  67   3e-10
GAV65106.1 CLTH domain-containing protein/zf-RING_LisH domain-co...    66   4e-10
OMO92114.1 Zinc finger, RING-type [Corchorus olitorius]                65   9e-10
OMO75354.1 Zinc finger, RING-type [Corchorus capsularis]               65   9e-10
XP_008236751.1 PREDICTED: protein RMD5 homolog A [Prunus mume]         65   9e-10
XP_019425927.1 PREDICTED: protein RMD5 homolog A-like [Lupinus a...    65   1e-09

>XP_006357752.1 PREDICTED: protein RMD5 homolog A [Solanum tuberosum]
          Length = 386

 Score = 72.0 bits (175), Expect = 3e-12
 Identities = 39/66 (59%), Positives = 46/66 (69%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MEL+TIKDAFDRV            EVIEQ+S EIE AL R+QS NDT + S+HK IL++
Sbjct: 1   MELSTIKDAFDRVTKKQKVASSKSQEVIEQISHEIEQALLRIQSANDTASLSEHKVILSE 60

Query: 378 LKLKLK 395
           LK KLK
Sbjct: 61  LKAKLK 66


>XP_017218532.1 PREDICTED: protein RMD5 homolog A [Daucus carota subsp. sativus]
           XP_017218533.1 PREDICTED: protein RMD5 homolog A [Daucus
           carota subsp. sativus] XP_017218534.1 PREDICTED: protein
           RMD5 homolog A [Daucus carota subsp. sativus] KZM88772.1
           hypothetical protein DCAR_025847 [Daucus carota subsp.
           sativus]
          Length = 386

 Score = 71.2 bits (173), Expect = 6e-12
 Identities = 38/66 (57%), Positives = 46/66 (69%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MELNTIKDAFDRV            ++IE++SQEIE ALSRMQSV  T +Q DHK +L +
Sbjct: 1   MELNTIKDAFDRVVKKQKLSSSKSQDMIERVSQEIEQALSRMQSVVGTTSQPDHKVVLAE 60

Query: 378 LKLKLK 395
           +K KLK
Sbjct: 61  VKTKLK 66


>XP_011099449.1 PREDICTED: protein RMD5 homolog A [Sesamum indicum] XP_011099450.1
           PREDICTED: protein RMD5 homolog A [Sesamum indicum]
          Length = 386

 Score = 71.2 bits (173), Expect = 6e-12
 Identities = 38/66 (57%), Positives = 45/66 (68%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MELN+IKDAFDRV            E+IEQ+ QEIE ALSR+QS  D+ + SDHK IL +
Sbjct: 1   MELNSIKDAFDRVTKKQKLSSSKSQEIIEQIGQEIEQALSRIQSGKDSASPSDHKLILNE 60

Query: 378 LKLKLK 395
           LK KLK
Sbjct: 61  LKAKLK 66


>XP_016560874.1 PREDICTED: protein RMD5 homolog A-like [Capsicum annuum]
           XP_016560875.1 PREDICTED: protein RMD5 homolog A-like
           [Capsicum annuum] XP_016560876.1 PREDICTED: protein RMD5
           homolog A-like [Capsicum annuum] XP_016560877.1
           PREDICTED: protein RMD5 homolog A-like [Capsicum annuum]
           XP_016560878.1 PREDICTED: protein RMD5 homolog A-like
           [Capsicum annuum]
          Length = 386

 Score = 70.5 bits (171), Expect = 1e-11
 Identities = 37/66 (56%), Positives = 46/66 (69%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MEL+TIKDAFDRV            EVIEQ+  EIE AL ++QS+NDT + S+HK IL++
Sbjct: 1   MELSTIKDAFDRVTKKQKVASSKSQEVIEQIGHEIEQALLKIQSINDTASLSEHKVILSE 60

Query: 378 LKLKLK 395
           LK KLK
Sbjct: 61  LKAKLK 66


>XP_004231966.1 PREDICTED: protein RMD5 homolog A [Solanum lycopersicum]
           XP_019068086.1 PREDICTED: protein RMD5 homolog A
           [Solanum lycopersicum]
          Length = 386

 Score = 70.5 bits (171), Expect = 1e-11
 Identities = 38/66 (57%), Positives = 45/66 (68%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MEL+TIKDAFDRV            EVIEQ+  EIE AL R+QS NDT + S+HK IL++
Sbjct: 1   MELSTIKDAFDRVTKKQKVASSKSQEVIEQIGHEIEQALLRIQSANDTASLSEHKVILSE 60

Query: 378 LKLKLK 395
           LK KLK
Sbjct: 61  LKAKLK 66


>XP_015066954.1 PREDICTED: protein RMD5 homolog A [Solanum pennellii]
          Length = 386

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 37/66 (56%), Positives = 45/66 (68%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MEL+TIKDAFDRV            EVIEQ+  EIE AL R+QS NDT + S+HK +L++
Sbjct: 1   MELSTIKDAFDRVTKKQKVASSKSQEVIEQIGHEIEQALLRIQSANDTASLSEHKVLLSE 60

Query: 378 LKLKLK 395
           LK KLK
Sbjct: 61  LKAKLK 66


>XP_009790615.1 PREDICTED: protein RMD5 homolog A-like [Nicotiana sylvestris]
           XP_009790617.1 PREDICTED: protein RMD5 homolog A-like
           [Nicotiana sylvestris] XP_009790618.1 PREDICTED: protein
           RMD5 homolog A-like [Nicotiana sylvestris]
           XP_016484968.1 PREDICTED: protein RMD5 homolog A-like
           [Nicotiana tabacum] XP_016484969.1 PREDICTED: protein
           RMD5 homolog A-like [Nicotiana tabacum]
          Length = 386

 Score = 68.2 bits (165), Expect = 7e-11
 Identities = 36/66 (54%), Positives = 43/66 (65%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MELNTIKDAFDRV            EV+EQ+  EIE AL R+QS ND  +  +HK IL++
Sbjct: 1   MELNTIKDAFDRVTKKQKVASSKFQEVMEQIGHEIEQALLRIQSTNDAASLGEHKMILSE 60

Query: 378 LKLKLK 395
           LK KLK
Sbjct: 61  LKAKLK 66


>KVH92413.1 CRA domain-containing protein [Cynara cardunculus var. scolymus]
          Length = 387

 Score = 68.2 bits (165), Expect = 7e-11
 Identities = 39/67 (58%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQS-VNDTMTQSDHKSILT 374
           M+LN IKDAFDRV            EV+EQMSQEIE ALS +QS  N T  Q DH  ILT
Sbjct: 1   MDLNNIKDAFDRVTKKQKVSSSKSQEVVEQMSQEIEQALSGIQSATNSTFPQPDHNLILT 60

Query: 375 DLKLKLK 395
           +LK KLK
Sbjct: 61  ELKAKLK 67


>XP_007041480.2 PREDICTED: protein RMD5 homolog A [Theobroma cacao] XP_017971835.1
           PREDICTED: protein RMD5 homolog A [Theobroma cacao]
          Length = 385

 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MELNTIKDAFDRV            EV++Q+  EIE AL+++Q+ ND ++  D KSILT+
Sbjct: 1   MELNTIKDAFDRVAKRQKLFSSKSQEVVDQVGHEIEQALAKIQASNDPLSPIDLKSILTE 60

Query: 378 LKLKL 392
           LKLKL
Sbjct: 61  LKLKL 65


>EOX97310.1 LisH/CRA/RING-U-box domains-containing protein isoform 1 [Theobroma
           cacao] EOX97311.1 LisH/CRA/RING-U-box domains-containing
           protein isoform 1 [Theobroma cacao]
          Length = 385

 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MELNTIKDAFDRV            EV++Q+  EIE AL+++Q+ ND ++  D KSILT+
Sbjct: 1   MELNTIKDAFDRVAKRQKLFSSKSQEVVDQVGHEIEQALAKIQASNDPLSPIDLKSILTE 60

Query: 378 LKLKL 392
           LKLKL
Sbjct: 61  LKLKL 65


>XP_019233518.1 PREDICTED: protein RMD5 homolog A [Nicotiana attenuata]
           XP_019233519.1 PREDICTED: protein RMD5 homolog A
           [Nicotiana attenuata] XP_019233520.1 PREDICTED: protein
           RMD5 homolog A [Nicotiana attenuata] OIT27332.1
           hypothetical protein A4A49_21602 [Nicotiana attenuata]
          Length = 386

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 36/66 (54%), Positives = 44/66 (66%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MELNTIKDAFDRV            EV+EQ+  EIE AL R+QS ND  + S++K IL++
Sbjct: 1   MELNTIKDAFDRVTKKQKVASSKSQEVMEQIGHEIEQALLRIQSTNDAASLSEYKMILSE 60

Query: 378 LKLKLK 395
           LK KLK
Sbjct: 61  LKAKLK 66


>XP_009596780.1 PREDICTED: protein RMD5 homolog A-like [Nicotiana tomentosiformis]
           XP_016512936.1 PREDICTED: protein RMD5 homolog A-like
           [Nicotiana tabacum] XP_016512937.1 PREDICTED: protein
           RMD5 homolog A-like [Nicotiana tabacum]
          Length = 386

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 36/66 (54%), Positives = 43/66 (65%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MELNTIKDAFDRV            EV+ Q+  EIE AL R+QS ND  + S+HK IL++
Sbjct: 1   MELNTIKDAFDRVTKKQKVASSKSQEVMAQIGHEIEQALLRIQSTNDAASLSEHKMILSE 60

Query: 378 LKLKLK 395
           LK KLK
Sbjct: 61  LKAKLK 66


>XP_002313209.1 hypothetical protein POPTR_0009s08400g [Populus trichocarpa]
           ABK92440.1 unknown [Populus trichocarpa] EEE87164.1
           hypothetical protein POPTR_0009s08400g [Populus
           trichocarpa]
          Length = 384

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 37/65 (56%), Positives = 43/65 (66%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MEL T KDAFDRV            EVI+Q+SQEIE AL ++QSV D M+  D KSILT+
Sbjct: 1   MELTTAKDAFDRVAEKQKLSFSKCQEVIDQVSQEIEQALVKIQSVEDPMSPVDQKSILTE 60

Query: 378 LKLKL 392
           LK KL
Sbjct: 61  LKHKL 65


>KZV53894.1 hypothetical protein F511_00160 [Dorcoceras hygrometricum]
          Length = 385

 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 36/65 (55%), Positives = 45/65 (69%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MELN IKDAFDRV            E+IE++ QEIE ALSR+QS ND+ + +DHKS+L +
Sbjct: 1   MELNPIKDAFDRVTKKQKLSFSKSQEIIERIGQEIEQALSRIQSANDS-SPTDHKSVLDE 59

Query: 378 LKLKL 392
           LK KL
Sbjct: 60  LKTKL 64


>CDP02671.1 unnamed protein product [Coffea canephora]
          Length = 386

 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 37/66 (56%), Positives = 44/66 (66%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MELNTIKDAFDRV            E+IEQ+SQEIE ALSR+   +D MTQ+D   +L +
Sbjct: 1   MELNTIKDAFDRVTKKQKLSSSKSQEIIEQISQEIEQALSRIGPGDDIMTQTDPTFMLCE 60

Query: 378 LKLKLK 395
           LK KLK
Sbjct: 61  LKAKLK 66


>GAV65106.1 CLTH domain-containing protein/zf-RING_LisH domain-containing
           protein [Cephalotus follicularis]
          Length = 386

 Score = 66.2 bits (160), Expect = 4e-10
 Identities = 35/65 (53%), Positives = 44/65 (67%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MELNTIKDAFDRV            EVI+Q+  EI+ AL+++QS ND+ +  D KSILT+
Sbjct: 1   MELNTIKDAFDRVSKKQKLSASKSQEVIDQVGFEIDQALAKVQSANDSCSTVDQKSILTE 60

Query: 378 LKLKL 392
           LK KL
Sbjct: 61  LKRKL 65


>OMO92114.1 Zinc finger, RING-type [Corchorus olitorius]
          Length = 384

 Score = 65.1 bits (157), Expect = 9e-10
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MELNTIKDAFDRV            EV+EQ+  EIE AL+++++ ND ++  D KSILT+
Sbjct: 1   MELNTIKDAFDRVAKRQKLSCKSQ-EVVEQVGHEIEQALAKIETTNDPLSPGDLKSILTE 59

Query: 378 LKLKL 392
           LKLKL
Sbjct: 60  LKLKL 64


>OMO75354.1 Zinc finger, RING-type [Corchorus capsularis]
          Length = 384

 Score = 65.1 bits (157), Expect = 9e-10
 Identities = 34/65 (52%), Positives = 46/65 (70%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MELNTIKDAFDRV            EV++Q+  EIE AL++++++ND ++  D KSILT+
Sbjct: 1   MELNTIKDAFDRVAKRQKLSCKSQ-EVVDQVGHEIEQALAKIETINDPLSPGDLKSILTE 59

Query: 378 LKLKL 392
           LKLKL
Sbjct: 60  LKLKL 64


>XP_008236751.1 PREDICTED: protein RMD5 homolog A [Prunus mume]
          Length = 386

 Score = 65.1 bits (157), Expect = 9e-10
 Identities = 34/66 (51%), Positives = 43/66 (65%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MEL TIKDAFDRV            EVI+Q+ QEI+  L ++QS ND  +Q D+KS L +
Sbjct: 1   MELTTIKDAFDRVAKKQKLSSSKAQEVIDQIDQEIQKTLQKIQSSNDCESQVDYKSALAE 60

Query: 378 LKLKLK 395
           LK+KLK
Sbjct: 61  LKVKLK 66


>XP_019425927.1 PREDICTED: protein RMD5 homolog A-like [Lupinus angustifolius]
           XP_019425928.1 PREDICTED: protein RMD5 homolog A-like
           [Lupinus angustifolius] OIV91601.1 hypothetical protein
           TanjilG_09013 [Lupinus angustifolius]
          Length = 385

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 32/65 (49%), Positives = 45/65 (69%)
 Frame = +3

Query: 198 MELNTIKDAFDRVGXXXXXXXXXXXEVIEQMSQEIEHALSRMQSVNDTMTQSDHKSILTD 377
           MEL++IKDAFDRV            +V++Q+ +EIE AL+ +QS ++  T  DHKS+LTD
Sbjct: 1   MELSSIKDAFDRVAKKQKVYSSKSQDVVDQLGREIEQALATIQSSHNPSTPVDHKSVLTD 60

Query: 378 LKLKL 392
           LK+KL
Sbjct: 61  LKVKL 65


Top