BLASTX nr result

ID: Panax25_contig00034178 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00034178
         (348 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017244664.1 PREDICTED: probable BOI-related E3 ubiquitin-prot...    57   2e-11
XP_017249945.1 PREDICTED: probable BOI-related E3 ubiquitin-prot...    57   3e-09
XP_012841867.1 PREDICTED: probable BOI-related E3 ubiquitin-prot...    51   4e-07

>XP_017244664.1 PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3
           [Daucus carota subsp. sativus] KZM98902.1 hypothetical
           protein DCAR_013736 [Daucus carota subsp. sativus]
          Length = 339

 Score = 57.4 bits (137), Expect(2) = 2e-11
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = +3

Query: 183 PVYGSGITDSFPVKPHNTVKAESGLTYNLPVSRKRNR 293
           PVYGSG+T+SFPVK H  +KA+S LT N PVSRKR R
Sbjct: 56  PVYGSGVTNSFPVKSHCAMKADSSLTCNFPVSRKRTR 92



 Score = 38.5 bits (88), Expect(2) = 2e-11
 Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
 Frame = +1

Query: 73  KAIMNAIDRNAKMYGVPT---GLP*LSKTTTETMFPVSG 180
           K +MN +D NA +YG P    G+P LS TTT++  PV G
Sbjct: 21  KLVMNGMDGNANVYGTPVGYGGVPLLSGTTTDSFVPVYG 59


>XP_017249945.1 PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3
           [Daucus carota subsp. sativus] KZM93578.1 hypothetical
           protein DCAR_016823 [Daucus carota subsp. sativus]
          Length = 314

 Score = 56.6 bits (135), Expect(2) = 3e-09
 Identities = 31/48 (64%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
 Frame = +3

Query: 183 PVYGSGITDSFPVKPHNTVKAESGLT--YNLPVSRKRNRALNGVVASP 320
           PVYGSGI DSFP K +  VKAESG+T  YNLPVSRKR R  +G +  P
Sbjct: 48  PVYGSGIMDSFPAKNYCPVKAESGVTYNYNLPVSRKRTR--DGAINPP 93



 Score = 32.0 bits (71), Expect(2) = 3e-09
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +1

Query: 82  MNAIDRNAKMYGVPTGLP*LSKTTTETMFPVSG 180
           MN  D NA +YG PTG       TTE++ PV G
Sbjct: 22  MNGYDGNANVYGTPTG---YGGVTTESLVPVYG 51


>XP_012841867.1 PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3
           [Erythranthe guttata]
          Length = 343

 Score = 51.2 bits (121), Expect(2) = 4e-07
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 9/63 (14%)
 Frame = +3

Query: 183 PVYGSGITDSFPVKPHNTVKAESGLTYNLPVSRKRNR----ALNGVVASPESG-----FG 335
           P+YGS    +FPVK    +K+ESG+TYN+PVSRKR+R    +L G V +   G     F 
Sbjct: 59  PMYGSAFAGAFPVKNPAAMKSESGVTYNVPVSRKRSRETINSLPGGVQNQSVGNRCGSFT 118

Query: 336 FLG 344
           FLG
Sbjct: 119 FLG 121



 Score = 30.0 bits (66), Expect(2) = 4e-07
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
 Frame = +1

Query: 79  IMNAIDRNAKMYGVPTG------LP*LSKTTTETMFPVSG 180
           +MN ++ N  ++GVP G      L   + T TETM P+ G
Sbjct: 23  VMNGVEGNGNVFGVPIGYGMVAPLSGTTTTATETMVPMYG 62


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