BLASTX nr result

ID: Panax25_contig00034171 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00034171
         (501 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017230575.1 PREDICTED: protein ROS1-like [Daucus carota subsp...    58   1e-06

>XP_017230575.1 PREDICTED: protein ROS1-like [Daucus carota subsp. sativus]
          Length = 1139

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 27/144 (18%)
 Frame = +2

Query: 149 FVFRSTNSISNQFPSTYLLQDLCSEKQMVAQVTDKEKVTKRRQNKLRPSLNNQ------- 307
           +  R    I +   S  LL+ L +E  +  ++ +K    K+R+N ++ S  N+       
Sbjct: 292 YTSRPIKFICSSSSSVNLLEHLSNE--LYHKIANKRMEMKKRRNNIKASPKNESGKRIEE 349

Query: 308 -------VSYKDSTLDSFLDVVLQKFKYLSISEKYGQLVMRDPNVD-------------R 427
                  +  KDS + SF+DV+  KF+  +I  KY QLV+RD +V              +
Sbjct: 350 CLSQESLLQGKDSNVHSFVDVI-DKFESPTIDHKYDQLVVRDRSVGASIVPYKGRFNPLK 408

Query: 428 ITKRKSPPKIDLDQESERVWALLM 499
             K+++ PK+DLD++SE+ W  LM
Sbjct: 409 KKKKEALPKVDLDEKSEKAWLKLM 432


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