BLASTX nr result

ID: Panax25_contig00033455 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00033455
         (1224 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM90722.1 hypothetical protein DCAR_021913 [Daucus carota subsp...   179   8e-49
XP_017256528.1 PREDICTED: probable ubiquitin-like-specific prote...   179   8e-46
KVH93388.1 Peptidase C48, SUMO/Sentrin/Ubl1 [Cynara cardunculus ...    60   4e-06

>KZM90722.1 hypothetical protein DCAR_021913 [Daucus carota subsp. sativus]
          Length = 371

 Score =  179 bits (453), Expect = 8e-49
 Identities = 131/325 (40%), Positives = 180/325 (55%), Gaps = 8/325 (2%)
 Frame = +3

Query: 6   SFNG*EFLHENCNSADTCHDSYSNSTVDKDFDTTPLAANP----LPSLPWYEPNALYDPG 173
           S N  +FL+E C SA++C  ++SN    + F T P+   P        P    + + +  
Sbjct: 64  SNNSRQFLNEFCASANSCMVNHSNYIAHQKFGTKPVVETPHILHCDGEPKLSNDEILESR 123

Query: 174 DNARSLTVGDYHPERQIVLYNPSKNVMSPIEECEEADDPTSATSYRAKELKATESQLPPG 353
            N RS T G  HP RQ   YN SK++MSPIEE EE+++  +A S   KEL ATES+L PG
Sbjct: 124 YNTRSSTDGYTHPARQ---YNQSKSIMSPIEEHEESEEQETAMSNWDKELNATESKLLPG 180

Query: 354 NYVNCXXXXXXXXXXXXCGPKPLLELQVSGDRKPELLDSDPEE-DK-DIYECSSTSSDEF 527
             V+                     + VSGD+   +LD D EE DK      + T SDEF
Sbjct: 181 ISVDFQEVEKQD------------NILVSGDQISAVLDLDVEEFDKMSAVPSTPTPSDEF 228

Query: 528 VACVVEDSQERIGTQDANE-CQGSAIERDKCVSSDQEANSVAVTRLPADQMPSDGLEACV 704
             CVVEDS+E   TQD ++ CQ SA  ++K  S +Q ANSVA T LP++ M +DGL  CV
Sbjct: 229 ADCVVEDSEEICETQDDDDVCQRSANHQNKASSFNQVANSVA-TSLPSESMLNDGLANCV 287

Query: 705 ISDSEEEQPESPGINVKCRSSSHQVDDMIALPNQKANFIEITDSTEGH-SPVSVIKGRRA 881
           +  SEE++  +P +  K    ++Q +    L ++++NFIEITDS E H S  S  + R +
Sbjct: 288 VGASEEKKFMTPWLKAKF-GCAYQQEVTAVLSSEESNFIEITDSGERHTSLTSDAEERMS 346

Query: 882 VKRPRAMVLEGESPLSKKPQMITLD 956
            KRPR M+LE E PL K+ Q I +D
Sbjct: 347 AKRPRNMLLEEEEPLRKRFQTIVID 371


>XP_017256528.1 PREDICTED: probable ubiquitin-like-specific protease 2A [Daucus
            carota subsp. sativus]
          Length = 897

 Score =  179 bits (453), Expect = 8e-46
 Identities = 131/325 (40%), Positives = 180/325 (55%), Gaps = 8/325 (2%)
 Frame = +3

Query: 6    SFNG*EFLHENCNSADTCHDSYSNSTVDKDFDTTPLAANP----LPSLPWYEPNALYDPG 173
            S N  +FL+E C SA++C  ++SN    + F T P+   P        P    + + +  
Sbjct: 590  SNNSRQFLNEFCASANSCMVNHSNYIAHQKFGTKPVVETPHILHCDGEPKLSNDEILESR 649

Query: 174  DNARSLTVGDYHPERQIVLYNPSKNVMSPIEECEEADDPTSATSYRAKELKATESQLPPG 353
             N RS T G  HP RQ   YN SK++MSPIEE EE+++  +A S   KEL ATES+L PG
Sbjct: 650  YNTRSSTDGYTHPARQ---YNQSKSIMSPIEEHEESEEQETAMSNWDKELNATESKLLPG 706

Query: 354  NYVNCXXXXXXXXXXXXCGPKPLLELQVSGDRKPELLDSDPEE-DK-DIYECSSTSSDEF 527
              V+                     + VSGD+   +LD D EE DK      + T SDEF
Sbjct: 707  ISVDFQEVEKQD------------NILVSGDQISAVLDLDVEEFDKMSAVPSTPTPSDEF 754

Query: 528  VACVVEDSQERIGTQDANE-CQGSAIERDKCVSSDQEANSVAVTRLPADQMPSDGLEACV 704
              CVVEDS+E   TQD ++ CQ SA  ++K  S +Q ANSVA T LP++ M +DGL  CV
Sbjct: 755  ADCVVEDSEEICETQDDDDVCQRSANHQNKASSFNQVANSVA-TSLPSESMLNDGLANCV 813

Query: 705  ISDSEEEQPESPGINVKCRSSSHQVDDMIALPNQKANFIEITDSTEGH-SPVSVIKGRRA 881
            +  SEE++  +P +  K    ++Q +    L ++++NFIEITDS E H S  S  + R +
Sbjct: 814  VGASEEKKFMTPWLKAKF-GCAYQQEVTAVLSSEESNFIEITDSGERHTSLTSDAEERMS 872

Query: 882  VKRPRAMVLEGESPLSKKPQMITLD 956
             KRPR M+LE E PL K+ Q I +D
Sbjct: 873  AKRPRNMLLEEEEPLRKRFQTIVID 897


>KVH93388.1 Peptidase C48, SUMO/Sentrin/Ubl1 [Cynara cardunculus var. scolymus]
          Length = 531

 Score = 60.1 bits (144), Expect = 4e-06
 Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 15/192 (7%)
 Frame = +3

Query: 21  EFLHENCNSADTCHDSYSNSTVDK---------DFDTTPLAANPLPSLPWYEPNALY--- 164
           +FLHE C+S +  + + S +  ++         D +      N L  L  +E    +   
Sbjct: 298 QFLHETCDSKELFNGNISGTCANRSRDVNAKHMDINLLDSDTNGLRLLTSFEELQSHSEK 357

Query: 165 --DPGDNARSLTVGDYHPERQIVLYNPSKNVMSPIEECEEADDPTSATSYRAKELKA-TE 335
             + GDN  SL   +     Q+VLY+PS+ V+SPI+E +E D  T+A S +     A TE
Sbjct: 358 FPETGDNGGSLIAANDQNHGQLVLYDPSQAVLSPIKESQETDSVTNAKSIKMDSFVACTE 417

Query: 336 SQLPPGNYVNCXXXXXXXXXXXXCGPKPLLELQVSGDRKPELLDSDPEEDKDIYECSSTS 515
             L   N +                   L E     D   ++L++   ED D    SS+S
Sbjct: 418 KCL---NLLR------------------LKESSKDDDNDDDVLETLVVEDSDECCSSSSS 456

Query: 516 SDEFVACVVEDS 551
            D +  CVVEDS
Sbjct: 457 DDVYETCVVEDS 468


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