BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00033338
         (370 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAV85747.1 Integrase core domain, putative [Oryza sativa Japonic...    84   2e-16
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]     84   2e-16
AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]          80   4e-15
ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass...    80   4e-15
XP_017252017.1 PREDICTED: uncharacterized protein LOC108222639 [...    74   6e-15
GAV90310.1 hypothetical protein CFOL_v3_33719, partial [Cephalot...    76   6e-15
XP_017240672.1 PREDICTED: uncharacterized protein LOC108213390 [...    75   1e-14
GAV61355.1 UBN2 domain-containing protein, partial [Cephalotus f...    75   2e-14
KIO93942.1 hypothetical protein QP38_2410 [Lactobacillus brevis]       77   3e-14
WP_042516805.1 hypothetical protein [Lactobacillus brevis]             77   3e-14
XP_020081861.1 uncharacterized protein LOC109705542 [Ananas como...    77   4e-14
OAP03954.1 hypothetical protein AXX17_AT3G36890 [Arabidopsis tha...    75   2e-13
AAR06328.1 putative polyprotein [Oryza sativa Japonica Group]          75   2e-13
ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass...    75   2e-13
XP_017227803.1 PREDICTED: uncharacterized protein LOC108203399 [...    68   2e-12
AAD17357.1 contains similarity to retrovirus-related polyprotein...    72   3e-12
CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group]               72   4e-12
AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-clas...    71   7e-12
KYP48511.1 Retrovirus-related Pol polyprotein from transposon TN...    70   1e-11
BAA22288.1 polyprotein [Oryza australiensis]                           70   1e-11

>AAV85747.1 Integrase core domain, putative [Oryza sativa Japonica Group]
           AAX92956.1 retrotransposon protein, putative, Ty1-copia
           sub-class [Oryza sativa Japonica Group] ABA92827.2
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1184

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 54/147 (36%), Positives = 71/147 (48%), Gaps = 34/147 (23%)
 Frame = +3

Query: 30  KPNSKTKQALKPKGGVAKEGDCHFCGKPGH*KRNCHAYXXXXXXXXXXXXM--------- 182
           KPN+K       K G AK+ +C FC + GH KRNC  Y                      
Sbjct: 215 KPNNK-------KSGPAKDAECFFCKEAGHWKRNCKKYLEQLKQKQQDGKSSTSGINVIE 267

Query: 183 ------------------------IQELRR-RTLAKGEVDLRVGNEAKVVALVVGTYHLS 287
                                   +Q L+R R+LA+GEVD+RVGN A+V A+ VGT  LS
Sbjct: 268 INLATSSTDSWVFDTGSVAHICKSLQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLS 327

Query: 288 LPTGLVLELEDFYYVSAMSNNIISVSC 368
           LP+ LVLEL ++Y + A+  N+IS SC
Sbjct: 328 LPSRLVLELNNYYCIPALCKNVISASC 354


>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 50/140 (35%), Positives = 64/140 (45%), Gaps = 33/140 (23%)
 Frame = +3

Query: 48  KQALKPKGGVAKEGDCHFCGKPGH*KRNCHAYXXXXXXXXXXXXMIQEL----------- 194
           K  LK K G  +E +C +C +PGH KRNC  Y                +           
Sbjct: 327 KPKLKTKSGPTQENECFYCKEPGHWKRNCKKYLADLKKNGGTKPSTSGINVIDVLLADSS 386

Query: 195 ----------------------RRRTLAKGEVDLRVGNEAKVVALVVGTYHLSLPTGLVL 308
                                 + R +A+GE+DLRVGN+AKV AL   T  L LP+G ++
Sbjct: 387 VNSWVFDTGSVAHICNSMQSLTKNRRVARGEMDLRVGNKAKVAALSAETLPLVLPSGFIM 446

Query: 309 ELEDFYYVSAMSNNIISVSC 368
           EL + YYV AMS NIIS SC
Sbjct: 447 ELNNCYYVPAMSRNIISASC 466


>AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 54/145 (37%), Positives = 70/145 (48%), Gaps = 34/145 (23%)
 Frame = +3

Query: 36  NSKTKQALKPKGGVAKEGDCHFCGKPGH*KRNCHAYXXXXXXXXXXXXM----------- 182
           NSKTK     K G AK+ +C FC + GH KRN   Y                        
Sbjct: 216 NSKTKVQ---KTGPAKDAECFFCKETGHWKRNYKKYLEQLKQKQQDGKSSTSGINVIEIN 272

Query: 183 ----------------------IQELRR-RTLAKGEVDLRVGNEAKVVALVVGTYHLSLP 293
                                 +Q L+R R+LA+GEVD+RVGN A+V A+ VGT  LSLP
Sbjct: 273 LATSSTDSWVFDTESVAHICKSLQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLP 332

Query: 294 TGLVLELEDFYYVSAMSNNIISVSC 368
           +G+VLEL + Y + A+  N+IS SC
Sbjct: 333 SGIVLELNNCYCIRALCKNVISASC 357


>ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1142

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 54/145 (37%), Positives = 70/145 (48%), Gaps = 34/145 (23%)
 Frame = +3

Query: 36  NSKTKQALKPKGGVAKEGDCHFCGKPGH*KRNCHAYXXXXXXXXXXXXM----------- 182
           NSKTK     K G AK+ +C FC + GH KRN   Y                        
Sbjct: 289 NSKTKVQ---KTGPAKDAECFFCKETGHWKRNYKKYLEQLKQKQQDGKSSTSGINVIEIN 345

Query: 183 ----------------------IQELRR-RTLAKGEVDLRVGNEAKVVALVVGTYHLSLP 293
                                 +Q L+R R+LA+GEVD+RVGN A+V A+ VGT  LSLP
Sbjct: 346 LATSSTDSWVFDTESVAHICKSLQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLP 405

Query: 294 TGLVLELEDFYYVSAMSNNIISVSC 368
           +G+VLEL + Y + A+  N+IS SC
Sbjct: 406 SGIVLELNNCYCIRALCKNVISASC 430


>XP_017252017.1 PREDICTED: uncharacterized protein LOC108222639 [Daucus carota
           subsp. sativus]
          Length = 101

 Score = 74.3 bits (181), Expect = 6e-15
 Identities = 32/47 (68%), Positives = 36/47 (76%)
 Frame = +3

Query: 3   KKIGSKSFAKPNSKTKQALKPKGGVAKEGDCHFCGKPGH*KRNCHAY 143
           KK+GS S A P     +ALKPKGGV K+GDCH+C KPGH KRNCHAY
Sbjct: 35  KKMGSNSNANPKPGPTKALKPKGGVQKDGDCHYCKKPGHWKRNCHAY 81


>GAV90310.1 hypothetical protein CFOL_v3_33719, partial [Cephalotus
           follicularis]
          Length = 175

 Score = 76.3 bits (186), Expect = 6e-15
 Identities = 52/127 (40%), Positives = 64/127 (50%), Gaps = 22/127 (17%)
 Frame = +3

Query: 18  KSFAKPNSKTKQALKPKGGVAK------EGDCHFCGKPGH*KRNCHAYXXXXXXXXXXXX 179
           K   K   KT ++L+ KGGV K      +G C  CGK G  K+NC  Y            
Sbjct: 48  KKGKKNLKKTSKSLQVKGGVRKALITEKKGTCFHCGKDGQWKKNCKVYLASLKDKPSEGM 107

Query: 180 M----------IQE------LRRRTLAKGEVDLRVGNEAKVVALVVGTYHLSLPTGLVLE 311
                      I        +RRR L+KGEVDLRVG+ A+VVAL VGT HL L +G VLE
Sbjct: 108 SNLCFVEVNLSINNSFSWVLIRRRKLSKGEVDLRVGDGARVVALAVGTVHLPLSSGRVLE 167

Query: 312 LEDFYYV 332
           L+  +YV
Sbjct: 168 LKYCFYV 174


>XP_017240672.1 PREDICTED: uncharacterized protein LOC108213390 [Daucus carota
           subsp. sativus]
          Length = 154

 Score = 75.1 bits (183), Expect = 1e-14
 Identities = 35/47 (74%), Positives = 37/47 (78%)
 Frame = +3

Query: 3   KKIGSKSFAKPNSKTKQALKPKGGVAKEGDCHFCGKPGH*KRNCHAY 143
           KKIGS S  KP +  KQALK KG +AK GDCHFCGKPGH KRNCHAY
Sbjct: 89  KKIGSTSAPKPKANPKQALKLKGAIAK-GDCHFCGKPGHWKRNCHAY 134


>GAV61355.1 UBN2 domain-containing protein, partial [Cephalotus follicularis]
          Length = 198

 Score = 75.5 bits (184), Expect = 2e-14
 Identities = 51/116 (43%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
 Frame = +3

Query: 18  KSFAKPNSKTKQALKPKGGVAK------EGDCHFCGKPGH*KRNCHAYXXXXXXXXXXXX 179
           K   K   KT + L+ KGGV K      +G C  CGK G  K     Y            
Sbjct: 83  KKGKKNLKKTSKPLQAKGGVKKASTTEKKGTCFHCGKDGRWKTKWKVYFASLKDKPSEDS 142

Query: 180 MI----QEL-RRRTLAKGEVDLRVGNEAKVVALVVGTYHLSLPTGLVLELEDFYYV 332
            I    Q L RRRTL+KGEVDL VGN A+V  L VGT HL LP+  VLEL++++YV
Sbjct: 143 DICNNLQALTRRRTLSKGEVDLLVGNGARVATLTVGTVHLLLPSERVLELKNYFYV 198


>KIO93942.1 hypothetical protein QP38_2410 [Lactobacillus brevis]
          Length = 321

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 56/154 (36%), Positives = 71/154 (46%), Gaps = 32/154 (20%)
 Frame = +3

Query: 3   KKIGSKSFAKPNSKTKQALKPKGGVAKEGDCHFCGKPGH*KRNC---------------- 134
           KK  SK   KP +   +  KPK G   E +C++C   GH KRNC                
Sbjct: 15  KKDNSKKSGKPVANPTK--KPKAGPKPEIECYYCKGMGHSKRNCPKNLPDKKAAKEKSGI 72

Query: 135 ---------------HAYXXXXXXXXXXXXMIQELR-RRTLAKGEVDLRVGNEAKVVALV 266
                           A+              QEL  +R LAK EV +RVGN +KV A+ 
Sbjct: 73  FDIHVIDVYLTNSRSSAWVFDTGYVAHICNSKQELWIKRRLAKDEVTMRVGNGSKVDAIA 132

Query: 267 VGTYHLSLPTGLVLELEDFYYVSAMSNNIISVSC 368
           VGT  L LP GLV+ L ++Y +SA+S NIIS SC
Sbjct: 133 VGTLSLQLPLGLVMNLNNYYLLSALSMNIISGSC 166


>WP_042516805.1 hypothetical protein [Lactobacillus brevis]
          Length = 323

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 56/154 (36%), Positives = 71/154 (46%), Gaps = 32/154 (20%)
 Frame = +3

Query: 3   KKIGSKSFAKPNSKTKQALKPKGGVAKEGDCHFCGKPGH*KRNC---------------- 134
           KK  SK   KP +   +  KPK G   E +C++C   GH KRNC                
Sbjct: 17  KKDNSKKSGKPVANPTK--KPKAGPKPEIECYYCKGMGHSKRNCPKNLPDKKAAKEKSGI 74

Query: 135 ---------------HAYXXXXXXXXXXXXMIQELR-RRTLAKGEVDLRVGNEAKVVALV 266
                           A+              QEL  +R LAK EV +RVGN +KV A+ 
Sbjct: 75  FDIHVIDVYLTNSRSSAWVFDTGYVAHICNSKQELWIKRRLAKDEVTMRVGNGSKVDAIA 134

Query: 267 VGTYHLSLPTGLVLELEDFYYVSAMSNNIISVSC 368
           VGT  L LP GLV+ L ++Y +SA+S NIIS SC
Sbjct: 135 VGTLSLQLPLGLVMNLNNYYLLSALSMNIISGSC 168


>XP_020081861.1 uncharacterized protein LOC109705542 [Ananas comosus]
          Length = 434

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 49/121 (40%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
 Frame = +3

Query: 30  KPNSKTKQALKPKGGVAK-----EGDCHFCGKPGH*KRNCHAYXXXXXXXXXXXX----- 179
           KP  K K   KPK   +K     +G C  C   GH KRNC  Y                 
Sbjct: 58  KPAKKQKTENKPKKEASKNKAADKGKCFHCNVDGHWKRNCPVYLESLKNKRKDTSSEGMS 117

Query: 180 -MIQELRRRTLAKGEVDLRVGNEAKVVALVVGTYHLSLPTGLVLELEDFYYVSAMSNNII 356
            ++     R L +GEV LRVGN A+V A+  GTY L LP+G VL L+D YYV   S N+I
Sbjct: 118 DLLGLRESRGLREGEVTLRVGNGARVAAVAAGTYSLRLPSGYVLLLKDCYYVPPASRNLI 177

Query: 357 S 359
           S
Sbjct: 178 S 178


>OAP03954.1 hypothetical protein AXX17_AT3G36890 [Arabidopsis thaliana]
          Length = 370

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 38/56 (67%), Positives = 46/56 (82%)
 Frame = +3

Query: 201 RTLAKGEVDLRVGNEAKVVALVVGTYHLSLPTGLVLELEDFYYVSAMSNNIISVSC 368
           RTL +G+VDLRV N AKV AL VGTY LSLP+ +VLEL++ YYV A++ NIISVSC
Sbjct: 80  RTLEEGQVDLRVANGAKVSALAVGTYSLSLPSCMVLELKNCYYVPAINKNIISVSC 135


>AAR06328.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 52/145 (35%), Positives = 67/145 (46%), Gaps = 34/145 (23%)
 Frame = +3

Query: 36  NSKTKQALKPKGGVAKEGDCHFCGKPGH*KRNCHAYXXXXXXXXXXXXM----------- 182
           NSKTK     K G AK+ +C F  + GH KRNC  Y                        
Sbjct: 329 NSKTKVQ---KTGPAKDAECFFYKETGHWKRNCKKYLEQLKQKQQDGKSSTSGINVIEIN 385

Query: 183 ----------------------IQELRR-RTLAKGEVDLRVGNEAKVVALVVGTYHLSLP 293
                                 +Q L+R R+LA+G VD+RVGN  +V  + VGT  LSLP
Sbjct: 386 LATSSTDSWVFDTGSVAHICKSLQGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLP 445

Query: 294 TGLVLELEDFYYVSAMSNNIISVSC 368
           +GLVLEL + Y + A+  N+IS SC
Sbjct: 446 SGLVLELNNCYCIPALCKNVISASC 470


>ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 52/145 (35%), Positives = 67/145 (46%), Gaps = 34/145 (23%)
 Frame = +3

Query: 36  NSKTKQALKPKGGVAKEGDCHFCGKPGH*KRNCHAYXXXXXXXXXXXXM----------- 182
           NSKTK     K G AK+ +C F  + GH KRNC  Y                        
Sbjct: 329 NSKTKVQ---KTGPAKDAECFFYKETGHWKRNCKKYLEQLKQKQQDGKSSTSGINVIEIN 385

Query: 183 ----------------------IQELRR-RTLAKGEVDLRVGNEAKVVALVVGTYHLSLP 293
                                 +Q L+R R+LA+G VD+RVGN  +V  + VGT  LSLP
Sbjct: 386 LATSSTDSWVFDTGSVAHICKSLQGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLP 445

Query: 294 TGLVLELEDFYYVSAMSNNIISVSC 368
           +GLVLEL + Y + A+  N+IS SC
Sbjct: 446 SGLVLELNNCYCIPALCKNVISASC 470


>XP_017227803.1 PREDICTED: uncharacterized protein LOC108203399 [Daucus carota
           subsp. sativus]
          Length = 114

 Score = 68.2 bits (165), Expect = 2e-12
 Identities = 30/47 (63%), Positives = 34/47 (72%)
 Frame = +3

Query: 3   KKIGSKSFAKPNSKTKQALKPKGGVAKEGDCHFCGKPGH*KRNCHAY 143
           KK+ S S A P     +ALKP GGV K+GDCH+C KPGH KRNCHAY
Sbjct: 48  KKMRSNSNANPKPGPTKALKPIGGVQKDGDCHYCKKPGHWKRNCHAY 94


>AAD17357.1 contains similarity to retrovirus-related polyproteins [Arabidopsis
           thaliana] CAB77943.1 putative transposon protein
           [Arabidopsis thaliana]
          Length = 769

 Score = 72.0 bits (175), Expect = 3e-12
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = +3

Query: 204 TLAKGEVDLRVGNEAKVVALVVGTYHLSLPTGLVLELEDFYYVSAMSNNIISVSC 368
           T+ +G+VDLR+ N A+V  LVVGTY LS P+G+VLEL++ YYV A++ NIISVSC
Sbjct: 81  TMEEGQVDLRMANGARVSTLVVGTYSLSFPSGMVLELKNCYYVHAINKNIISVSC 135


>CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score = 71.6 bits (174), Expect = 4e-12
 Identities = 34/58 (58%), Positives = 44/58 (75%)
 Frame = +3

Query: 195 RRRTLAKGEVDLRVGNEAKVVALVVGTYHLSLPTGLVLELEDFYYVSAMSNNIISVSC 368
           R R+LA+GEVD+RVGN A+V  + VGT  LSLP+GLVLEL + Y + A+  N+IS SC
Sbjct: 280 RSRSLARGEVDIRVGNGARVAVVAVGTMSLSLPSGLVLELNNCYCIPALCKNVISASC 337


>AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] ABA93176.1 retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 938

 Score = 70.9 bits (172), Expect = 7e-12
 Identities = 35/58 (60%), Positives = 43/58 (74%)
 Frame = +3

Query: 195 RRRTLAKGEVDLRVGNEAKVVALVVGTYHLSLPTGLVLELEDFYYVSAMSNNIISVSC 368
           R R LA+GEVD+ VGN A VVA+ VGT  LSLP+GLVLEL + Y + A+  N+IS SC
Sbjct: 206 RSRNLARGEVDIHVGNGASVVAVAVGTMPLSLPSGLVLELNNCYCILALCKNVISASC 263


>KYP48511.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 422

 Score = 70.1 bits (170), Expect = 1e-11
 Identities = 53/157 (33%), Positives = 69/157 (43%), Gaps = 45/157 (28%)
 Frame = +3

Query: 30  KPNSKTKQALKP---KGGVAK-----------EGDCHFCGKPGH*KRNCHAYXXXXXXXX 167
           K + KTK   KP   KGGV K           + +C +C + GH KRNC  Y        
Sbjct: 145 KMDCKTKPKKKPFAAKGGVTKPNRKKVTVDKSDAECFYCKQKGHWKRNCKKYLDSLKENK 204

Query: 168 XXXX------------------------------MIQELR-RRTLAKGEVDLRVGNEAKV 254
                                             M+Q L+  R L KGEV L+VGN   V
Sbjct: 205 QGMTLMKNVFMISLTVTDSSMWVLDTGSSFNICNMLQGLQITRRLKKGEVSLQVGNGENV 264

Query: 255 VALVVGTYHLSLPTGLVLELEDFYYVSAMSNNIISVS 365
           VAL +G+  L +PTG VL L++ YY+S   +NIIS+S
Sbjct: 265 VALALGSVSLIMPTGKVLVLDNCYYISTFVSNIISIS 301


>BAA22288.1 polyprotein [Oryza australiensis]
          Length = 1317

 Score = 70.1 bits (170), Expect = 1e-11
 Identities = 46/133 (34%), Positives = 58/133 (43%), Gaps = 32/133 (24%)
 Frame = +3

Query: 66  KGGVAKEGDCHFCGKPGH*KRNCHAYXXXXXXXXXXXXM--------------------- 182
           KG  A +  C +C + GH KRNC  Y                                  
Sbjct: 246 KGSAASDAVCFYCKETGHWKRNCKKYMEDLKKKQSTTSASGINVIDINLATSPTDSWVFD 305

Query: 183 ----------IQELRR-RTLAKGEVDLRVGNEAKVVALVVGTYHLSLPTGLVLELEDFYY 329
                     +Q +RR R L +GEV+LRVGN A V  + VGT  L LP+GLVLEL + Y 
Sbjct: 306 TGSVAHSCKSLQGMRRSRGLRRGEVNLRVGNGASVATVAVGTVPLHLPSGLVLELNNCYC 365

Query: 330 VSAMSNNIISVSC 368
           V  +  N+IS SC
Sbjct: 366 VPTLCQNVISASC 378