BLASTX nr result

ID: Panax25_contig00033325 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00033325
         (354 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM99242.1 hypothetical protein DCAR_013396 [Daucus carota subsp...    65   4e-10
KHG08018.1 28 kDa ribonucleoprotein, chloroplastic [Gossypium ar...    62   5e-09
XP_019153264.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    62   1e-08
KHN18780.1 Polyadenylate-binding protein, cytoplasmic and nuclea...    60   3e-08
KHG14859.1 28 kDa ribonucleoprotein, chloroplastic [Gossypium ar...    60   3e-08
CDJ26527.1 unnamed protein product [Triticum aestivum]                 60   4e-08
KZN03071.1 hypothetical protein DCAR_011827 [Daucus carota subsp...    60   5e-08
XP_017241288.1 PREDICTED: clathrin heavy chain 1 isoform X2 [Dau...    60   5e-08
XP_020183897.1 clathrin heavy chain 1-like isoform X2 [Aegilops ...    60   5e-08
EMS67801.1 Clathrin heavy chain 1 [Triticum urartu]                    60   5e-08
XP_003576374.1 PREDICTED: clathrin heavy chain 1-like [Brachypod...    60   5e-08
EMT06756.1 Clathrin heavy chain 1 [Aegilops tauschii]                  60   5e-08
XP_017241287.1 PREDICTED: clathrin heavy chain 1 isoform X1 [Dau...    60   5e-08
XP_020183896.1 clathrin heavy chain 1-like isoform X1 [Aegilops ...    60   5e-08
JAT52601.1 Clathrin heavy chain 2, partial [Anthurium amnicola]        57   6e-08
XP_015873065.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    59   9e-08
XP_017247815.1 PREDICTED: heterogeneous nuclear ribonucleoprotei...    59   9e-08
JAT56534.1 Clathrin heavy chain 1, partial [Anthurium amnicola]        59   1e-07
JAT46849.1 Clathrin heavy chain 1 [Anthurium amnicola]                 59   1e-07
CBI28315.3 unnamed protein product, partial [Vitis vinifera]           59   1e-07

>KZM99242.1 hypothetical protein DCAR_013396 [Daucus carota subsp. sativus]
          Length = 463

 Score = 65.5 bits (158), Expect = 4e-10
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = -2

Query: 122 GITSVSLLQIRAVYVKNLPKNITQDQLKNQIKHHGKITKV 3
           G+  V LL+++AVYVKNLPKNITQDQLK+  +HHGKITKV
Sbjct: 235 GVNGVELLKVKAVYVKNLPKNITQDQLKDVFEHHGKITKV 274


>KHG08018.1 28 kDa ribonucleoprotein, chloroplastic [Gossypium arboreum]
          Length = 415

 Score = 62.4 bits (150), Expect = 5e-09
 Identities = 26/40 (65%), Positives = 35/40 (87%)
 Frame = -2

Query: 122 GITSVSLLQIRAVYVKNLPKNITQDQLKNQIKHHGKITKV 3
           G+T + L++++AVYVKNLPK++TQDQLK   +HHGKITKV
Sbjct: 204 GVTGLELVKVKAVYVKNLPKDVTQDQLKKLFEHHGKITKV 243


>XP_019153264.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R [Ipomoea nil]
           XP_019153272.1 PREDICTED: heterogeneous nuclear
           ribonucleoprotein R [Ipomoea nil] XP_019153281.1
           PREDICTED: heterogeneous nuclear ribonucleoprotein R
           [Ipomoea nil] XP_019153290.1 PREDICTED: heterogeneous
           nuclear ribonucleoprotein R [Ipomoea nil]
          Length = 473

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = -2

Query: 116 TSVSLLQIRAVYVKNLPKNITQDQLKNQIKHHGKITKV 3
           +S S  Q++AVYVKNLP+NITQDQLKN  +HHGKITKV
Sbjct: 269 SSASSSQVKAVYVKNLPRNITQDQLKNLFEHHGKITKV 306


>KHN18780.1 Polyadenylate-binding protein, cytoplasmic and nuclear [Glycine
           soja]
          Length = 410

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 26/40 (65%), Positives = 34/40 (85%)
 Frame = -2

Query: 122 GITSVSLLQIRAVYVKNLPKNITQDQLKNQIKHHGKITKV 3
           G+  V LL++++VYVKNLP+NITQD+LK   +HHGKITKV
Sbjct: 213 GVICVELLKVKSVYVKNLPENITQDRLKELFEHHGKITKV 252


>KHG14859.1 28 kDa ribonucleoprotein, chloroplastic [Gossypium arboreum]
          Length = 423

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 24/40 (60%), Positives = 34/40 (85%)
 Frame = -2

Query: 122 GITSVSLLQIRAVYVKNLPKNITQDQLKNQIKHHGKITKV 3
           G+  + L++++A+YVKNLPK++TQDQLK   +HHGKITKV
Sbjct: 220 GVAGLELVKVKAIYVKNLPKDVTQDQLKKLFEHHGKITKV 259


>CDJ26527.1 unnamed protein product [Triticum aestivum]
          Length = 356

 Score = 59.7 bits (143), Expect = 4e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -3

Query: 295 VVSWKWITPKLLGLVTQASVYHWSIEG 215
           VV WKWITPKLLGLVTQASVYHWSIEG
Sbjct: 115 VVFWKWITPKLLGLVTQASVYHWSIEG 141


>KZN03071.1 hypothetical protein DCAR_011827 [Daucus carota subsp. sativus]
          Length = 1487

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -3

Query: 295 VVSWKWITPKLLGLVTQASVYHWSIEG 215
           VV WKWITPKLLGLVTQASVYHWSIEG
Sbjct: 114 VVFWKWITPKLLGLVTQASVYHWSIEG 140


>XP_017241288.1 PREDICTED: clathrin heavy chain 1 isoform X2 [Daucus carota subsp.
           sativus]
          Length = 1703

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -3

Query: 295 VVSWKWITPKLLGLVTQASVYHWSIEG 215
           VV WKWITPKLLGLVTQASVYHWSIEG
Sbjct: 114 VVFWKWITPKLLGLVTQASVYHWSIEG 140


>XP_020183897.1 clathrin heavy chain 1-like isoform X2 [Aegilops tauschii subsp.
           tauschii]
          Length = 1708

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -3

Query: 295 VVSWKWITPKLLGLVTQASVYHWSIEG 215
           VV WKWITPKLLGLVTQASVYHWSIEG
Sbjct: 114 VVFWKWITPKLLGLVTQASVYHWSIEG 140


>EMS67801.1 Clathrin heavy chain 1 [Triticum urartu]
          Length = 1708

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -3

Query: 295 VVSWKWITPKLLGLVTQASVYHWSIEG 215
           VV WKWITPKLLGLVTQASVYHWSIEG
Sbjct: 114 VVFWKWITPKLLGLVTQASVYHWSIEG 140


>XP_003576374.1 PREDICTED: clathrin heavy chain 1-like [Brachypodium distachyon]
           KQJ89631.1 hypothetical protein BRADI_4g26877
           [Brachypodium distachyon]
          Length = 1708

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -3

Query: 295 VVSWKWITPKLLGLVTQASVYHWSIEG 215
           VV WKWITPKLLGLVTQASVYHWSIEG
Sbjct: 115 VVFWKWITPKLLGLVTQASVYHWSIEG 141


>EMT06756.1 Clathrin heavy chain 1 [Aegilops tauschii]
          Length = 1728

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -3

Query: 295 VVSWKWITPKLLGLVTQASVYHWSIEG 215
           VV WKWITPKLLGLVTQASVYHWSIEG
Sbjct: 114 VVFWKWITPKLLGLVTQASVYHWSIEG 140


>XP_017241287.1 PREDICTED: clathrin heavy chain 1 isoform X1 [Daucus carota subsp.
           sativus]
          Length = 1729

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -3

Query: 295 VVSWKWITPKLLGLVTQASVYHWSIEG 215
           VV WKWITPKLLGLVTQASVYHWSIEG
Sbjct: 114 VVFWKWITPKLLGLVTQASVYHWSIEG 140


>XP_020183896.1 clathrin heavy chain 1-like isoform X1 [Aegilops tauschii subsp.
           tauschii]
          Length = 1734

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -3

Query: 295 VVSWKWITPKLLGLVTQASVYHWSIEG 215
           VV WKWITPKLLGLVTQASVYHWSIEG
Sbjct: 114 VVFWKWITPKLLGLVTQASVYHWSIEG 140


>JAT52601.1 Clathrin heavy chain 2, partial [Anthurium amnicola]
          Length = 156

 Score = 57.4 bits (137), Expect = 6e-08
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -3

Query: 295 VVSWKWITPKLLGLVTQASVYHWSIEG 215
           VV WKWITPK+LGLVTQ SVYHWSIEG
Sbjct: 115 VVFWKWITPKMLGLVTQTSVYHWSIEG 141


>XP_015873065.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Ziziphus
           jujuba] XP_015873073.1 PREDICTED: heterogeneous nuclear
           ribonucleoprotein R-like [Ziziphus jujuba]
          Length = 520

 Score = 58.9 bits (141), Expect = 9e-08
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = -2

Query: 98  QIRAVYVKNLPKNITQDQLKNQIKHHGKITKV 3
           Q++AVYVKNLPK++TQDQLK Q +HHGKITKV
Sbjct: 305 QVKAVYVKNLPKSVTQDQLKKQFEHHGKITKV 336


>XP_017247815.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R [Daucus carota
           subsp. sativus]
          Length = 521

 Score = 58.9 bits (141), Expect = 9e-08
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -2

Query: 98  QIRAVYVKNLPKNITQDQLKNQIKHHGKITKV 3
           Q++AVYVKNLPKNITQDQLK+  +HHGKITKV
Sbjct: 301 QVKAVYVKNLPKNITQDQLKDVFEHHGKITKV 332


>JAT56534.1 Clathrin heavy chain 1, partial [Anthurium amnicola]
          Length = 1136

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -3

Query: 295 VVSWKWITPKLLGLVTQASVYHWSIEG 215
           VV WKWITPK+LGLVTQASVYHWSIEG
Sbjct: 114 VVFWKWITPKMLGLVTQASVYHWSIEG 140


>JAT46849.1 Clathrin heavy chain 1 [Anthurium amnicola]
          Length = 1701

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -3

Query: 295 VVSWKWITPKLLGLVTQASVYHWSIEG 215
           VV WKWITPK+LGLVTQASVYHWSIEG
Sbjct: 114 VVFWKWITPKMLGLVTQASVYHWSIEG 140


>CBI28315.3 unnamed protein product, partial [Vitis vinifera]
          Length = 434

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -2

Query: 98  QIRAVYVKNLPKNITQDQLKNQIKHHGKITKV 3
           Q++AVYVKNLPKNITQDQLK   +HHGKITKV
Sbjct: 227 QVKAVYVKNLPKNITQDQLKQLFEHHGKITKV 258


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