BLASTX nr result
ID: Panax25_contig00033238
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00033238
(436 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010469692.1 PREDICTED: INO80 complex subunit D-like [Camelina... 112 1e-27
XP_019083009.1 PREDICTED: INO80 complex subunit D-like [Camelina... 112 2e-27
XP_013586035.1 PREDICTED: INO80 complex subunit D [Brassica oler... 112 2e-27
XP_006294593.1 hypothetical protein CARUB_v10023629mg, partial [... 112 3e-27
NP_973576.1 INO80 complex subunit D-like protein [Arabidopsis th... 109 5e-27
XP_010510182.1 PREDICTED: INO80 complex subunit D-like [Camelina... 111 5e-27
CDY10157.1 BnaC05g04000D [Brassica napus] 110 6e-27
AAD24838.1 hypothetical protein [Arabidopsis thaliana] OAP11483.... 109 7e-27
XP_013697797.1 PREDICTED: INO80 complex subunit D-like [Brassica... 110 8e-27
XP_006410293.1 hypothetical protein EUTSA_v10017019mg [Eutrema s... 110 1e-26
XP_013734126.1 PREDICTED: INO80 complex subunit D-like [Brassica... 109 2e-26
CDX84768.1 BnaA03g14620D [Brassica napus] 109 2e-26
NP_180718.2 INO80 complex subunit D-like protein [Arabidopsis th... 109 3e-26
XP_009132806.1 PREDICTED: INO80 complex subunit D [Brassica rapa] 108 3e-26
XP_013628154.1 PREDICTED: INO80 complex subunit D [Brassica oler... 108 4e-26
XP_013742749.1 PREDICTED: INO80 complex subunit D-like [Brassica... 108 5e-26
XP_009119111.1 PREDICTED: INO80 complex subunit D [Brassica rapa] 106 2e-25
XP_013666649.1 PREDICTED: INO80 complex subunit D-like [Brassica... 106 2e-25
XP_010069327.1 PREDICTED: INO80 complex subunit D [Eucalyptus gr... 105 4e-25
XP_004298050.1 PREDICTED: INO80 complex subunit D [Fragaria vesc... 103 1e-24
>XP_010469692.1 PREDICTED: INO80 complex subunit D-like [Camelina sativa]
Length = 289
Score = 112 bits (281), Expect = 1e-27
Identities = 62/128 (48%), Positives = 78/128 (60%), Gaps = 14/128 (10%)
Frame = +3
Query: 90 MASSSHHQQALPSK----RPKI----------EPHNENPNPTSXXXXXXXDKGKSVISPS 227
MAS+S + Q PS RP EP NPNP + D S I+ S
Sbjct: 1 MASASKNVQQNPSSSKPPRPPTSSSAVASTSSEPQIRNPNPNTNVLPSTSD---SPIAMS 57
Query: 228 QEDENLSNSTHLTHQEVLQRRSHYFRQLAKCYREHYWALMEELKIQHRDYVWKFGLSPFS 407
QEDE + S+HLT E+L+RRSH +QLAKCYR+HYWALME+LK QHRDY WK+G SPF
Sbjct: 58 QEDEIFTRSSHLTRPELLRRRSHNLKQLAKCYRDHYWALMEDLKGQHRDYWWKYGSSPFK 117
Query: 408 GDNNEKNE 431
++N+ N+
Sbjct: 118 EEHNQSNK 125
>XP_019083009.1 PREDICTED: INO80 complex subunit D-like [Camelina sativa]
Length = 295
Score = 112 bits (280), Expect = 2e-27
Identities = 53/96 (55%), Positives = 67/96 (69%)
Frame = +3
Query: 144 EPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSHYFRQLAKCY 323
EP NPNP + D S I+ SQEDE + S+HLT E+L+RRSH +QLAKCY
Sbjct: 39 EPQIRNPNPNTNVLPSTSD---SPIAMSQEDEIFTRSSHLTRPELLRRRSHNLKQLAKCY 95
Query: 324 REHYWALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
R+HYWALME+LK QHRDY WK+G SPF ++N+ N+
Sbjct: 96 RDHYWALMEDLKGQHRDYWWKYGSSPFKDEHNQSNK 131
>XP_013586035.1 PREDICTED: INO80 complex subunit D [Brassica oleracea var.
oleracea]
Length = 285
Score = 112 bits (279), Expect = 2e-27
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = +3
Query: 144 EPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSHYFRQLAKCY 323
E NPNP+S S IS S ED+ L STHLT E+L+RRSH +QLAKCY
Sbjct: 34 ESQFRNPNPSSILLP---SPSNSPISMSAEDQILGRSTHLTRPELLRRRSHNLKQLAKCY 90
Query: 324 REHYWALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
R+HYWALME+LK QHR+Y WK+G+SPF DN+ +N+
Sbjct: 91 RDHYWALMEDLKAQHREYYWKYGVSPFKEDNHHQNK 126
>XP_006294593.1 hypothetical protein CARUB_v10023629mg, partial [Capsella rubella]
EOA27491.1 hypothetical protein CARUB_v10023629mg,
partial [Capsella rubella]
Length = 325
Score = 112 bits (280), Expect = 3e-27
Identities = 54/105 (51%), Positives = 73/105 (69%)
Frame = +3
Query: 117 ALPSKRPKIEPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSH 296
A S P+I N PNP++ D S I+ SQEDE L+ S+HLT E+L+RRSH
Sbjct: 55 ASTSSEPQIRNPNLTPNPSTNVLPSTSD---SPITMSQEDEILARSSHLTRPELLRRRSH 111
Query: 297 YFRQLAKCYREHYWALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
+QLAKCYR++YWALME+LK QHRDY WK+G+SPF ++++ N+
Sbjct: 112 NLKQLAKCYRDNYWALMEDLKAQHRDYWWKYGVSPFKDEHSQSNK 156
>NP_973576.1 INO80 complex subunit D-like protein [Arabidopsis thaliana]
NP_001324027.1 INO80 complex subunit D-like protein
[Arabidopsis thaliana] AAP21690.1 hypothetical protein
[Arabidopsis thaliana] AEC08566.1 INO80 complex subunit
D-like protein [Arabidopsis thaliana] ANM61831.1 INO80
complex subunit D-like protein [Arabidopsis thaliana]
Length = 216
Score = 109 bits (272), Expect = 5e-27
Identities = 52/105 (49%), Positives = 70/105 (66%)
Frame = +3
Query: 117 ALPSKRPKIEPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSH 296
A S P I NPNP++ S I+ SQEDE L+ S+H+T E+L+RRSH
Sbjct: 33 ASTSAEPLIRNSTLNPNPSTSGLP---STSNSPITMSQEDEILARSSHITRSELLKRRSH 89
Query: 297 YFRQLAKCYREHYWALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
+QLAKCYR++YWALME++K QHRDY WK+G+S F +NN+ N+
Sbjct: 90 NLKQLAKCYRDNYWALMEDVKAQHRDYWWKYGISQFKDENNQSNK 134
>XP_010510182.1 PREDICTED: INO80 complex subunit D-like [Camelina sativa]
Length = 295
Score = 111 bits (277), Expect = 5e-27
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = +3
Query: 144 EPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSHYFRQLAKCY 323
EP NPNP + D S I SQEDE + S+HLT E+L+RRSH +QLAKCY
Sbjct: 39 EPQIRNPNPNTNVLPSTSD---SPIVMSQEDEIFTRSSHLTRPELLRRRSHNLKQLAKCY 95
Query: 324 REHYWALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
R+HYWALME+LK QHRDY WK+G SPF ++N+ N+
Sbjct: 96 RDHYWALMEDLKGQHRDYWWKYGSSPFKDEHNQSNK 131
>CDY10157.1 BnaC05g04000D [Brassica napus]
Length = 285
Score = 110 bits (276), Expect = 6e-27
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = +3
Query: 144 EPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSHYFRQLAKCY 323
E NPNP+S S IS S ED+ L STHLT E+L+RRSH +QLAKCY
Sbjct: 34 ESQFRNPNPSSILLP---SPSNSPISMSAEDQILGLSTHLTRPELLRRRSHNLKQLAKCY 90
Query: 324 REHYWALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
R+HYWALME+LK QHR+Y WK+G+SPF DN+ +N+
Sbjct: 91 RDHYWALMEDLKAQHREYYWKYGVSPFKEDNHHQNK 126
>AAD24838.1 hypothetical protein [Arabidopsis thaliana] OAP11483.1 hypothetical
protein AXX17_AT2G27840 [Arabidopsis thaliana]
Length = 231
Score = 109 bits (272), Expect = 7e-27
Identities = 52/105 (49%), Positives = 70/105 (66%)
Frame = +3
Query: 117 ALPSKRPKIEPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSH 296
A S P I NPNP++ S I+ SQEDE L+ S+H+T E+L+RRSH
Sbjct: 33 ASTSAEPLIRNSTLNPNPSTSGLP---STSNSPITMSQEDEILARSSHITRSELLKRRSH 89
Query: 297 YFRQLAKCYREHYWALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
+QLAKCYR++YWALME++K QHRDY WK+G+S F +NN+ N+
Sbjct: 90 NLKQLAKCYRDNYWALMEDVKAQHRDYWWKYGISQFKDENNQSNK 134
>XP_013697797.1 PREDICTED: INO80 complex subunit D-like [Brassica napus]
Length = 285
Score = 110 bits (275), Expect = 8e-27
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = +3
Query: 144 EPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSHYFRQLAKCY 323
E NPNP+S S IS S ED+ L STHLT E+L+RRSH +QLAKCY
Sbjct: 34 ESQFRNPNPSSILLP---SPSNSPISMSVEDQILGLSTHLTRPELLRRRSHNLKQLAKCY 90
Query: 324 REHYWALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
R+HYWALME+LK QHR+Y WK+G+SPF DN+ +N+
Sbjct: 91 RDHYWALMEDLKAQHREYYWKYGVSPFKEDNHHQNK 126
>XP_006410293.1 hypothetical protein EUTSA_v10017019mg [Eutrema salsugineum]
ESQ51746.1 hypothetical protein EUTSA_v10017019mg
[Eutrema salsugineum]
Length = 293
Score = 110 bits (274), Expect = 1e-26
Identities = 54/105 (51%), Positives = 71/105 (67%)
Frame = +3
Query: 117 ALPSKRPKIEPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSH 296
A S P+I NPNP+S + S I+ S ED+ L+ S+HLT E+LQRRSH
Sbjct: 32 ASTSAEPQIR--TPNPNPSS-------NASNSPITISPEDQILAGSSHLTRPELLQRRSH 82
Query: 297 YFRQLAKCYREHYWALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
+QLAKCYR+HYWALME+LK QHRDY W++G+SPF + N+ N+
Sbjct: 83 NLKQLAKCYRDHYWALMEDLKSQHRDYYWRYGVSPFKDEQNQANK 127
>XP_013734126.1 PREDICTED: INO80 complex subunit D-like [Brassica napus]
Length = 286
Score = 109 bits (273), Expect = 2e-26
Identities = 56/125 (44%), Positives = 77/125 (61%), Gaps = 11/125 (8%)
Frame = +3
Query: 90 MASSSHHQQALPSKRP-----------KIEPHNENPNPTSXXXXXXXDKGKSVISPSQED 236
MAS+S + ++ RP + + N NPNP S S I+ S ED
Sbjct: 1 MASASKNPFSMKPPRPPPSSLAASTSAESQIRNPNPNPNSNASP---STSNSPITMSPED 57
Query: 237 ENLSNSTHLTHQEVLQRRSHYFRQLAKCYREHYWALMEELKIQHRDYVWKFGLSPFSGDN 416
+ LS STHLT E+L+RRSH +QLAKCYR+HYWALME+LK QHR+Y W++G+SPF +
Sbjct: 58 QLLSRSTHLTRPELLRRRSHNLKQLAKCYRDHYWALMEDLKAQHREYYWRYGVSPFKDEQ 117
Query: 417 NEKNE 431
N+ ++
Sbjct: 118 NQPSK 122
>CDX84768.1 BnaA03g14620D [Brassica napus]
Length = 286
Score = 109 bits (272), Expect = 2e-26
Identities = 58/125 (46%), Positives = 77/125 (61%), Gaps = 11/125 (8%)
Frame = +3
Query: 90 MASSSHHQQALPSKRP---------KIEPHNE--NPNPTSXXXXXXXDKGKSVISPSQED 236
MAS+S + ++ RP EP NPNPTS S I+ S ED
Sbjct: 1 MASASKNPFSMKPPRPPPSSLAASTSAEPQIRIPNPNPTSNASP---STSNSPITMSPED 57
Query: 237 ENLSNSTHLTHQEVLQRRSHYFRQLAKCYREHYWALMEELKIQHRDYVWKFGLSPFSGDN 416
+ LS STHLT E+L+RRSH +QLAKCYR+HYWALME+LK QHR+Y W++G+SPF +
Sbjct: 58 QLLSRSTHLTRPELLRRRSHNLKQLAKCYRDHYWALMEDLKAQHREYYWRYGVSPFKDEQ 117
Query: 417 NEKNE 431
N+ ++
Sbjct: 118 NQPSK 122
>NP_180718.2 INO80 complex subunit D-like protein [Arabidopsis thaliana]
NP_001318328.1 INO80 complex subunit D-like protein
[Arabidopsis thaliana] NP_001324025.1 INO80 complex
subunit D-like protein [Arabidopsis thaliana]
NP_001324026.1 INO80 complex subunit D-like protein
[Arabidopsis thaliana] AAP21689.1 hypothetical protein
[Arabidopsis thaliana] AAT69231.1 hypothetical protein
At2g31600 [Arabidopsis thaliana] AEC08565.1 INO80
complex subunit D-like protein [Arabidopsis thaliana]
OAP11484.1 hypothetical protein AXX17_AT2G27840
[Arabidopsis thaliana] ANM61829.1 INO80 complex subunit
D-like protein [Arabidopsis thaliana] ANM61830.1 INO80
complex subunit D-like protein [Arabidopsis thaliana]
ANM61832.1 INO80 complex subunit D-like protein
[Arabidopsis thaliana]
Length = 301
Score = 109 bits (272), Expect = 3e-26
Identities = 52/105 (49%), Positives = 70/105 (66%)
Frame = +3
Query: 117 ALPSKRPKIEPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSH 296
A S P I NPNP++ S I+ SQEDE L+ S+H+T E+L+RRSH
Sbjct: 33 ASTSAEPLIRNSTLNPNPSTSGLP---STSNSPITMSQEDEILARSSHITRSELLKRRSH 89
Query: 297 YFRQLAKCYREHYWALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
+QLAKCYR++YWALME++K QHRDY WK+G+S F +NN+ N+
Sbjct: 90 NLKQLAKCYRDNYWALMEDVKAQHRDYWWKYGISQFKDENNQSNK 134
>XP_009132806.1 PREDICTED: INO80 complex subunit D [Brassica rapa]
Length = 286
Score = 108 bits (271), Expect = 3e-26
Identities = 52/105 (49%), Positives = 69/105 (65%)
Frame = +3
Query: 117 ALPSKRPKIEPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSH 296
A S P+I N NPN + S I+ S ED+ LS STHLT E+L+RRSH
Sbjct: 23 ASTSAEPQIRIPNPNPNSNASP-----STSNSPITMSPEDQLLSRSTHLTRPELLRRRSH 77
Query: 297 YFRQLAKCYREHYWALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
+QLAKCYR+HYWALME+LK QHR+Y W++G+SPF + N+ ++
Sbjct: 78 NLKQLAKCYRDHYWALMEDLKAQHREYYWRYGVSPFKDEQNQPSK 122
>XP_013628154.1 PREDICTED: INO80 complex subunit D [Brassica oleracea var.
oleracea] CDY23928.1 BnaC03g17630D [Brassica napus]
Length = 292
Score = 108 bits (271), Expect = 4e-26
Identities = 49/91 (53%), Positives = 65/91 (71%)
Frame = +3
Query: 159 NPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSHYFRQLAKCYREHYW 338
NPNP+S S I+ S ED+ LS S+HLT E+L+RRSH +QLAKCYR+HYW
Sbjct: 40 NPNPSSNASP---STSNSPITMSPEDQTLSRSSHLTRPELLRRRSHNLKQLAKCYRDHYW 96
Query: 339 ALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
ALME+LK QHR+Y W++G+SPF + N+ N+
Sbjct: 97 ALMEDLKAQHREYYWRYGVSPFKDEQNQPNK 127
>XP_013742749.1 PREDICTED: INO80 complex subunit D-like [Brassica napus]
Length = 292
Score = 108 bits (270), Expect = 5e-26
Identities = 49/91 (53%), Positives = 65/91 (71%)
Frame = +3
Query: 159 NPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSHYFRQLAKCYREHYW 338
NPNP+S S I+ S ED+ LS S+HLT E+L+RRSH +QLAKCYR+HYW
Sbjct: 40 NPNPSSNASP---STSNSPITMSPEDQTLSRSSHLTRPELLRRRSHNLKQLAKCYRDHYW 96
Query: 339 ALMEELKIQHRDYVWKFGLSPFSGDNNEKNE 431
ALME+LK QHR+Y W++G+SPF + N+ N+
Sbjct: 97 ALMEDLKAQHREYYWRYGVSPFKEEQNQPNK 127
>XP_009119111.1 PREDICTED: INO80 complex subunit D [Brassica rapa]
Length = 281
Score = 106 bits (265), Expect = 2e-25
Identities = 52/92 (56%), Positives = 62/92 (67%)
Frame = +3
Query: 144 EPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSHYFRQLAKCY 323
E NPNP+S S IS S ED+ L STHLT E+L+RRSH +QLAKCY
Sbjct: 34 ESQFRNPNPSSSLLP-----SNSPISMSVEDQILGRSTHLTRPELLRRRSHNLKQLAKCY 88
Query: 324 REHYWALMEELKIQHRDYVWKFGLSPFSGDNN 419
R+HYWALME+LK QHR+Y WK G+SPF DN+
Sbjct: 89 RDHYWALMEDLKAQHREYYWKHGVSPFKEDNH 120
>XP_013666649.1 PREDICTED: INO80 complex subunit D-like [Brassica napus] CDY47700.1
BnaA10g03890D [Brassica napus]
Length = 281
Score = 106 bits (265), Expect = 2e-25
Identities = 52/92 (56%), Positives = 62/92 (67%)
Frame = +3
Query: 144 EPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSHYFRQLAKCY 323
E NPNP+S S IS S ED+ L STHLT E+L+RRSH +QLAKCY
Sbjct: 34 ESQFRNPNPSSSLLP-----SNSPISMSVEDQILGRSTHLTRPELLRRRSHNLKQLAKCY 88
Query: 324 REHYWALMEELKIQHRDYVWKFGLSPFSGDNN 419
R+HYWALME+LK QHR+Y WK G+SPF DN+
Sbjct: 89 RDHYWALMEDLKAQHREYYWKHGVSPFKEDNH 120
>XP_010069327.1 PREDICTED: INO80 complex subunit D [Eucalyptus grandis] KCW57646.1
hypothetical protein EUGRSUZ_H00413 [Eucalyptus grandis]
KCW57647.1 hypothetical protein EUGRSUZ_H00413
[Eucalyptus grandis] KCW57648.1 hypothetical protein
EUGRSUZ_H00413 [Eucalyptus grandis] KCW57649.1
hypothetical protein EUGRSUZ_H00413 [Eucalyptus grandis]
Length = 281
Score = 105 bits (263), Expect = 4e-25
Identities = 48/111 (43%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Frame = +3
Query: 93 ASSSHHQQALPSKRPKI---EPHNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHL 263
+++ H+Q P K P +PHN +P+ + G ++P+ ED LS ++HL
Sbjct: 3 SAAKHNQPPKPLKNPNFPQPDPHNPSPHAAAAASTSAGGGGNP-LAPTHEDSVLSRASHL 61
Query: 264 THQEVLQRRSHYFRQLAKCYREHYWALMEELKIQHRDYVWKFGLSPFSGDN 416
EVL+RRS +QL++CYR+HYWALMEELK+Q+RDY WK+G+SPF ++
Sbjct: 62 ARPEVLRRRSRRLKQLSRCYRDHYWALMEELKVQYRDYYWKYGMSPFKEES 112
>XP_004298050.1 PREDICTED: INO80 complex subunit D [Fragaria vesca subsp. vesca]
Length = 230
Score = 103 bits (257), Expect = 1e-24
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = +3
Query: 150 HNENPNPTSXXXXXXXDKGKSVISPSQEDENLSNSTHLTHQEVLQRRSHYFRQLAKCYRE 329
+N P P+S D S I+PSQED LS ++HLT QE+L+RRSH ++L KCY++
Sbjct: 5 NNTLPPPSSSKND---DPSTSAITPSQEDAYLSRASHLTRQELLRRRSHRLKELTKCYKD 61
Query: 330 HYWALMEELKIQHRDYVWKFGLSPFSGDN 416
HYW ME LKIQ+R+Y WK+G+SPF DN
Sbjct: 62 HYWGFMEHLKIQYREYYWKYGVSPFKQDN 90